Basic Information

Insect: Tetramorium simillimum
Gene Symbol: -
Assembly: GCA_011636635.1
Location: VBVQ01004382.1:2621-10070[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00011 0.013 16.4 0.1 2 23 735 756 734 756 0.97

2 17 0.13 16 6.7 1.1 1 19 762 780 762 781 0.92

3 17 0.89 1e+02 4.2 0.5 2 23 789 810 788 810 0.95

4 17 6.9e-05 0.0081 17.1 1.4 3 23 819 840 818 840 0.98

5 17 0.0026 0.31 12.1 2.0 1 23 847 870 847 870 0.95

6 17 9.1e-05 0.011 16.7 0.7 1 23 876 899 876 899 0.94

7 17 6.5 7.7e+02 1.4 1.8 3 23 908 927 907 927 0.83

8 17 1.3e-07 1.6e-05 25.6 2.1 2 23 933 954 932 954 0.97

9 17 2.2e-06 0.00025 21.8 0.2 1 23 960 982 960 982 0.99

10 17 0.00054 0.063 14.3 2.4 2 23 994 1016 993 1016 0.95

11 17 0.0076 0.89 10.7 2.5 1 23 1022 1045 1022 1045 0.96

12 17 0.027 3.2 8.9 2.8 2 23 1066 1088 1065 1088 0.94

13 17 0.00024 0.028 15.4 0.5 2 23 1095 1117 1094 1117 0.96

14 17 5.5e-05 0.0065 17.4 1.0 3 23 1126 1146 1124 1146 0.96

15 17 0.0012 0.14 13.2 2.3 1 23 1152 1175 1152 1175 0.96

16 17 0.09 11 7.3 3.3 2 23 1182 1203 1181 1203 0.96

17 17 0.0092 1.1 10.4 2.6 1 23 1209 1231 1209 1231 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00011	0.013	16.4	0.1	2	23	735	756	734	756	0.97
2	17	0.13	16	6.7	1.1	1	19	762	780	762	781	0.92
3	17	0.89	1e+02	4.2	0.5	2	23	789	810	788	810	0.95
4	17	6.9e-05	0.0081	17.1	1.4	3	23	819	840	818	840	0.98
5	17	0.0026	0.31	12.1	2.0	1	23	847	870	847	870	0.95
6	17	9.1e-05	0.011	16.7	0.7	1	23	876	899	876	899	0.94
7	17	6.5	7.7e+02	1.4	1.8	3	23	908	927	907	927	0.83
8	17	1.3e-07	1.6e-05	25.6	2.1	2	23	933	954	932	954	0.97
9	17	2.2e-06	0.00025	21.8	0.2	1	23	960	982	960	982	0.99
10	17	0.00054	0.063	14.3	2.4	2	23	994	1016	993	1016	0.95
11	17	0.0076	0.89	10.7	2.5	1	23	1022	1045	1022	1045	0.96
12	17	0.027	3.2	8.9	2.8	2	23	1066	1088	1065	1088	0.94
13	17	0.00024	0.028	15.4	0.5	2	23	1095	1117	1094	1117	0.96
14	17	5.5e-05	0.0065	17.4	1.0	3	23	1126	1146	1124	1146	0.96
15	17	0.0012	0.14	13.2	2.3	1	23	1152	1175	1152	1175	0.96
16	17	0.09	11	7.3	3.3	2	23	1182	1203	1181	1203	0.96
17	17	0.0092	1.1	10.4	2.6	1	23	1209	1231	1209	1231	0.98

Sequence Information

Coding Sequence: ATGCCGAATCCTGAAGTGAATAAACGCGATCACAATTACAGCGAGTCGAAACCTCAACATGCCAACAATGGCAACAGTAGTGCTATCGGCAAGGTGTCCAACTTGGGACCCAAGGTGGGATCGATTGTGGGTCAGATTAGGGACATCGacgaattgaagaaaattgcgCCGCGCGTCCGTCTACAGGACACCGAAAGCTTGAACGAGTTGACAAGGATCTCTTCTTTAAGTAACAGTAAATTACAGCATAACGATACACTCGTTCTTGAGAGGACGCGGCAAGAACTGAGAAAGTACTGTCGCACCTGCGCTGGCTTAAAACTACCCTTGGTGGACATCTTTAGTGAGAAGGGCATTAAATTGCGACTGAGTCAGCAAATCAAGCACCTCGAAGTGAATCTTTATGATAGTCTCTCTACACAGATGTGCATGGATTGCATATGTGATCTTAGAATGAGTTACACATTTTTCATGCAGATAAAAAAAGCTGAGATAAAACTCAAATCTATCCATGCCAATCTCACGACTGATAGTACCATGAACAAAATGACGCTGAGCGACGAGTCTTTGACAAGAAAAGAAGAGCAACCATCTTGTCCAGAAACAAAGCAGGATTATCAATTAGCCTCTACAATCCAACAAAATCTCTCTTCATTGTCACTGAAGCGAGAAACCCAAACAACTCCCGGAAATCAAGCAAATAATTCTGTTCCAAAAATCTGTGCCATTTTTTCGTTGAATAACGAATCGAAGGTAAATTCTGAAAAGGAGAAGACGAAAAACGATGATGATGAGGAAGATGAGATAGTACAGACAGGCCCAGGGATTTTCGAAGAAGTGGCAGAGGGAGAGGATGAAGAATCCATCGAGGAATTTGATCCTGAAGATCCCGCGCTCCTGGAAgatgaggaagaagaagaggaagaggaagaaggaggaggaggtgaaggaggagaagaagaaggaggaggaaaaGGTAAAGGAAAAGAAGTAGAAGAAGAATCGTCATCTTCAAGATCCCCAGCAACTGTCTACAAGTACGATATGGCAGCAAAGTCTTATGTGAGGTTGGAAAGAAGTGAAGAGGGAGTTTCTGTAAAATCTGGAGCTTCCCAGATTTCAGAAGGCGAAGGAGAAAATCAAAGAGAGGGAATGAGGCAaccaaatattttgaaaagaaaactgATAATGCCAACGATAACGACAAAGAACGAGGGAGGGGAGGACGAGTTACAAAGCATAGTGGAGGAGCGCAAAGTGCAAAAGCTAGATACAAACAATCTTTCGAATGGTCCTGTAGAAGAGGATGGCATTATGTACGTAACTGTAAAGGGATCCAAACCAAATGAGATTCTACTGGTGAAGGTCAAAAAAATGGACAAACCCATGGAAGCAAAGCGTGCGGTAATCTCCACTGATTTCAAGCCTGTTGAACGTTTTCTCAAACGTTATGAAACATTGACATCGAAAGATTCCTCATCTCGACGTCCTGATGCCCGCGAGCAAATAATTGAGGAACAAatcgaagaatataaaaagaaacgagaaaaagtTCTTGGAGGTCAGTCGGTAGTAACATTTCCAGTGAACGAAACGCAAaaagaagaacaagaagaagaaatttccgccaagttaaattttgtaaagacgGAAGAAGAAATGATAGTTCCGAAAGTGGTTGGAGAAAGAGGCGAGGAAGTGCAAGGGCAGGAGCAGGATCGGAAGCAAGAGCAAGCGCAAGAGCAAGAGCAAGAACAAGAGCAGGAGGAAGAGCAAGATGAGAGAATGGTCGAGGAAGATGATCGGGAAGAGAAGTTGGTAAAGGATGAAAAGATTGACGAAAATCAAGAAAAGTCCATTGATAATGTAGAAGAACATCTATCAAAGTCAagattaaaactaaaatggGAAGAGACGAAGCGGAAAAAGGAAAGTTTACAAAAGGAATTAGACGAGTCGTATAGCGAAccaaatttagaaaaattggcAAAAGTTTTgggagaaagggaaaaaaatctACAGGAATTCCTGGAGTACCTGAAGCAACGTAAAATCGTTCTTACTCGCCTCAAGGACGAGGACATAATCTCCCTCTATGAAGATCGATTCTCCACCACTTTAAAATCATCCAACTCTAAATCGCTGCCAGACCTTATCGACACTCAACCTCCCGTCGACCCTCTTTCTGAAGAACGCTATTTAGAATGTGATTATTGCTCCGAAGTCTTTTCCAATCGCGATGTTCTCGAGGAACATCTCAAGTCCCACGACTACCGTATTCTTCATTATTGCGACGACTGTGGAGAAGAATTTCAAACGAATAAAGCGAAAAGAAATCATAATGTGATCTGCGTgaggaaattaatttgcaaatattgcgACATAATTCTGGATTCCAGGGGGAAGAAACGTCAACATGAGCAGAAACATGTTGATGCCCTTTACGGTCAGCTTTGCGAGATTTGTGGTGAGAGATTCAAACACCAAGGAACCTTGGATCAACATTTGAAGACACAGCATACGAGCTTGGAGAAGATCTATCAGTGTCCAAAGTGTCCAAAGAAATTTGCTTTCAAACAAAAACTGAGTTTTCATTTGAAATCTGTTCATACAACTATGAGAGCGTATCTTTGCGAGGATTGTGGCGCAGATTTTAAGAATCCCGCGAGCTTGAGGCATCATAGAATCAGAAAGCATCAACCGGTTGGAAATAAGAGGGAATGCCAAGTTTGCAGGAAATTGGTGCCGTTTTATAGTTTGTCGAAGCACATGCACACGCATAAGGCTTACAGTATTCAGTGTCCACATTGTGACAAAATGTTCAAAAACAGCTCAACCTTGAAGCAACACGTAAGAATTCACGAAGATCAAAGGCAGTATCGTTGTGACACCTGTGGCGTTGGATTTAATCGGAGGGATGGCTTGAGGTTGCATATGAGAGTGCATGAGAAAACTGGTAGTAGAGGCTTGAAGGAGTGCTCCTGCCAAGTTTGTGGGGAAAAGTTTCCGAATCATTCGACTTTGGTCATTCACAGGAACAGAGTGCACAAAGACGGGAGGCAGTATACGTGTCATATTTGTAACAGGTCAATGATTTCGACGAGATCGCTCGAGTGGCATATGTCGCACATTCACAACGAATCGATGCCAGGCATTATTCGCGACGAGTCCGGTCTGCCTGAAAAAAGACGGGTTTCCTGTTATCATTGCAACAAGACCTTCAAGACGGAACTAATTCTTCGCACACACATTAAGAATACGCACATGGAGAAGGATCCGTTGAAATGTACAGATTGCGAGGCCGTTTTCACATCTGAAGTGCGTTTACGGCATCATATGATGGTTGTGCACAATCGTCTCGAGGGTACTTTGGCATGTCCTCACTGTCCGAAACGATTTGTGAATCAATTAAGGCTAAAGACTCATATGATCTCTCATTCTGAGGAAAGACCATATACCTGCGAGATCTGTGGTTTTAATCTCAAGACAAAGATCCAGCTGATCAAGCATCATCAAAACCGACACAGCGATGAGAGACCTCTGCAGTGCAAaTACTGTCCTTGGCGATGCAAGCAAGTGAGCGCCCTTGTTTGTCACGAGCGCACGCATACGAACGAACGCCCATATTCGTGCAGCGTATGCCGGCAACGCTTCAAATATCTCGGTGACAAAAACAAGCATGAACGCCGACACGAGAGCCTCGGTGGGTCAGGCTTCAAGCGTATTGTACCCGGGAGAAATGTCAAACCGAAGTCGCGCGGCGATGATTCCGGCTCCGGATCCGAGCAGGGTTCGCTCAAGGACTCGGCGAATCGACAGGACATTCAGGTTACCGAGGAACAATACGAAGAGCAGCAAGATGGACAATACGATCAAAAATTTCCGGAGGAACAGATGGTCAAATTCGAACAGGAGCAGATCGTCAAATTTGAAGGTGAAGAGGAATACGAAGAAGCAGTGTACGAGCAGGAGTACGAAGAAACTTCGAGAGAAGCATCGGAAGCTACCGAGGTAATTATGAACATGGAGGATTCGACGGTATACACGGAAGAAGTTACGGCCGATAATATAGAGCCTAGCGTGGAGATCATGACGGATGAGATGATGACAAATGATATTCTACAATCTGGCACTGCTGTCATGCATCTGCAACGTCGCAATAATTCCTCGGGAGAGATTCAAGTGATACCAGTGATGCTGTCGCTACCCGATCTGTCCGATGCAAACACTGAAGTTAATCTTGCGACCGCGTCCatcatgtataataattag
Protein Sequence: MPNPEVNKRDHNYSESKPQHANNGNSSAIGKVSNLGPKVGSIVGQIRDIDELKKIAPRVRLQDTESLNELTRISSLSNSKLQHNDTLVLERTRQELRKYCRTCAGLKLPLVDIFSEKGIKLRLSQQIKHLEVNLYDSLSTQMCMDCICDLRMSYTFFMQIKKAEIKLKSIHANLTTDSTMNKMTLSDESLTRKEEQPSCPETKQDYQLASTIQQNLSSLSLKRETQTTPGNQANNSVPKICAIFSLNNESKVNSEKEKTKNDDDEEDEIVQTGPGIFEEVAEGEDEESIEEFDPEDPALLEDEEEEEEEEEGGGGEGGEEEGGGKGKGKEVEEESSSSRSPATVYKYDMAAKSYVRLERSEEGVSVKSGASQISEGEGENQREGMRQPNILKRKLIMPTITTKNEGGEDELQSIVEERKVQKLDTNNLSNGPVEEDGIMYVTVKGSKPNEILLVKVKKMDKPMEAKRAVISTDFKPVERFLKRYETLTSKDSSSRRPDAREQIIEEQIEEYKKKREKVLGGQSVVTFPVNETQKEEQEEEISAKLNFVKTEEEMIVPKVVGERGEEVQGQEQDRKQEQAQEQEQEQEQEEEQDERMVEEDDREEKLVKDEKIDENQEKSIDNVEEHLSKSRLKLKWEETKRKKESLQKELDESYSEPNLEKLAKVLGEREKNLQEFLEYLKQRKIVLTRLKDEDIISLYEDRFSTTLKSSNSKSLPDLIDTQPPVDPLSEERYLECDYCSEVFSNRDVLEEHLKSHDYRILHYCDDCGEEFQTNKAKRNHNVICVRKLICKYCDIILDSRGKKRQHEQKHVDALYGQLCEICGERFKHQGTLDQHLKTQHTSLEKIYQCPKCPKKFAFKQKLSFHLKSVHTTMRAYLCEDCGADFKNPASLRHHRIRKHQPVGNKRECQVCRKLVPFYSLSKHMHTHKAYSIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMRVHEKTGSRGLKECSCQVCGEKFPNHSTLVIHRNRVHKDGRQYTCHICNRSMISTRSLEWHMSHIHNESMPGIIRDESGLPEKRRVSCYHCNKTFKTELILRTHIKNTHMEKDPLKCTDCEAVFTSEVRLRHHMMVVHNRLEGTLACPHCPKRFVNQLRLKTHMISHSEERPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCKYCPWRCKQVSALVCHERTHTNERPYSCSVCRQRFKYLGDKNKHERRHESLGGSGFKRIVPGRNVKPKSRGDDSGSGSEQGSLKDSANRQDIQVTEEQYEEQQDGQYDQKFPEEQMVKFEQEQIVKFEGEEEYEEAVYEQEYEETSREASEATEVIMNMEDSTVYTEEVTADNIEPSVEIMTDEMMTNDILQSGTAVMHLQRRNNSSGEIQVIPVMLSLPDLSDANTEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01423101; iTF_01523555; iTF_01405965; iTF_01405973; iTF_01407605; iTF_01406745; iTF_00126923; iTF_00129198; iTF_00127665; iTF_00128435; iTF_00129941; iTF_00126170; iTF_01408495; iTF_00765852; iTF_00885347; iTF_01409404; iTF_01520478;
90% Identity: iTF_01423101;
80% Identity: -