Waur010626.1
Basic Information
- Insect
- Wasmannia auropunctata
- Gene Symbol
- -
- Assembly
- GCA_000956235.1
- Location
- NW:37371-47879[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 6.5e-05 0.0047 16.7 0.2 2 23 728 749 727 749 0.97 2 17 0.097 7.1 6.8 1.1 1 19 755 773 755 774 0.92 3 17 0.64 47 4.2 0.5 2 23 782 803 781 803 0.95 4 17 8.7e-05 0.0064 16.3 1.3 3 23 812 833 811 833 0.98 5 17 0.0019 0.14 12.2 2.0 1 23 840 863 840 863 0.95 6 17 6.6e-05 0.0048 16.7 0.7 1 23 869 892 869 892 0.94 7 17 4.7 3.4e+02 1.5 1.8 3 23 901 920 900 920 0.83 8 17 9.6e-08 7e-06 25.6 2.1 2 23 926 947 925 947 0.97 9 17 1.5e-06 0.00011 21.8 0.2 1 23 953 975 953 975 0.99 10 17 0.00039 0.028 14.3 2.4 2 23 987 1009 986 1009 0.95 11 17 0.0012 0.088 12.8 1.6 1 23 1015 1038 1015 1038 0.96 12 17 0.02 1.4 8.9 2.8 2 23 1059 1081 1058 1081 0.94 13 17 0.00049 0.036 14.0 0.5 2 23 1088 1110 1087 1110 0.96 14 17 4e-05 0.0029 17.4 1.0 3 23 1119 1139 1117 1139 0.96 15 17 0.00083 0.061 13.3 2.3 1 23 1145 1168 1145 1168 0.96 16 17 0.23 17 5.6 3.2 2 23 1175 1196 1174 1196 0.96 17 17 0.0066 0.48 10.4 2.6 1 23 1202 1224 1202 1224 0.98
Sequence Information
- Coding Sequence
- atgcCGAATCCTGAAATCAGCAAACGTGATCACAATTATAGTGAATCGAAATCTCAATATGCCAACAATAGTGTCGATGGCGTTATCAGCAAGATACCTAAGACAGGGTCTATTGTGGGTCAAATTCGAGATATCAATGAGCTGAAGAAGATTGCGCCGCGCGTCCGTCTACAGGATACTGAGAGCTTGACGAATGAATTGACGAGGATCTCTTCTTTAAATAACCACAAGTCACAGCAAAACAATTCGTCCGTTCTCGAGAGAACGCGGCAAGAACTGAGAAAATACTGCCGCACTTGCGCTGGCCTAAAACTGCCCTTgGTGGATATCTTTAGTGAAAAGGGTATCAAATTGCGATTGAGTCAGCAAATCAAGCATCTCGAAGTGAATCCTTATGATAGTCCATGCACACAGATGTGCATGGACTGCATCTGCGATCTTAGAAtgagttataaatttttcatgcaGATTAAAAAAGCTGAGATAAAACTCAAATCTATCCAAGTCAATCTCACGACTGATAATGTCACGAAGAAAGTAATGCCGATCGACGTGTCTTCAGCAATGAAAGAAGAGAAACAATCATCTTATTCAGaAACAAAGCAAGAATATCAATTAACATCAGCAATCCAACAAAATCCATCTTTATTCCATCAAAATCCAACACCAACAAAGCATGAAAACCAAACCATTTCTGGGAGTCAAGCAGATGACTCTGTTCCCAAAATTTGCGCCATCTTTTCGTTGAACGAATCGAAAGTAAAAAAGGATTTTGGaaaggaagaagaggaggaggaaaaagaagaagataaCGACGAAGAAGAGGTAGTACAAATAAGTGGAGGAATATTCGAGGAGGTGGCGGAGGGAGAGGATGAAGAATCTATCGAGGAATTTGATCCTGAAGACCCTGCGCTTATGGAAGATgaacaagaagaagaagaagaagaagaagaaaaagaaggacTTTCAAGATCTTTAAAAACCGTCTACAAGTACGATATGGCAGCAGACTCTTACGTGAGAGTGGAAGGAAATGATGAGCGAGTTTCTGTGGAATCTGAAGCCTCCCAAACTTCAGGgaatgaaaatttaagagaGGGAATGAGGCAGCCGAATATCTTGAAAAGAAAACTAGTAACATCGAATAAGAATGATGGAGAGGACGAGGTACAAAACATAGTGGAGCAGCACAAGGCACAAAAGTTAGATTCAAATAATCTTTTGAATATCAATAATCCTCCAGAAGAAGATGGAATTATGTACGTAACCGTGAAGGGATCCAAACCGAACGAGATTCTTTTGGTAAAGGTCAAGAAAATGGACAAACCCATGGAATCCAAGCGCGCAGTAACCTCCGCTGATCTCAAGCCTGTTGAGCGTTTTCTCAAACGTTATGAAACGTTGACATCGAAGGACTTTTCCTCTCGACGCCCCGATGCCCGCGAGCAAATAATTGAGGAACAAATcgaagaatataaaaagaaacgagaaaaagTCCTTGGAGGTCAATCGTTCAATGTGAACGAAACACAAAGAAAAATACCAGAAGAAGAAATTTCCGTCaatatgaattttgaaaaGGCACAAGAAGAAATGACAGTTCCGAAGGAAGtagatggagagagagaggagaaagaggaggaggaggaggaagaggaggaggaggaggagggggaggaggaggaggaggagaggataaagataaaacaggaggacgaggaggtggaggaggaggaggacaagaaggaggaggcggaggaggaagaggagcaggaagaagaaggagagaagaTGGAAAAGAGTAACGAGAAGATTGACGAGGGTCAAGAAAAGGCCAATGATAATACAGaggaatatttttcaaagttatcAAGATTGAAACTAAAGTGGGAAGAGACAAAACGGAAAAAGGAAAGTTTGCAAAAGGAACTAAACGCATCGTATAACGAAGGGAATTTGGAGAAATTGGCAAAAGTTTTGGGGGAACAAGAAAATCTGCAGGAATTCCAAGAGTACCTGAAGCAGCGTAAAATCGTTCTTACTCGCCTTAAAGACGAGGACATAATCTCCCTCTATGAAGATCGATTCTCCACGACTTTAAAATCGCTCCCTAAATCGCTTCCAGACCTTATCGACACTCAACCTCCTAGCGATCCTCTTTCCGAAGAGCGCTATTTGGAATGCGATTACTGCTCCGAAACCTTCTCCAACCGCGATGTTCTCGAGGAACATCTCAAGTCCCACGACTACCGTATGCTTCATTATTGCGACGATTGTGGGGAGGAATTTCAAACGaataaagcaaaaagaaaTCATAACGTGATTTGtgtgaagaaattaatttgcaaatattgtGACATAATTCTCGACTCCAGAGGGAAAAAACGTCAGCATGAGCAGAAACATGTTGATGCTCTTTATGGTCAACTTTGCGAGGTTTGCGGAGAAAGATTCAAACACCAAGGAACCCTGGATCAACACCTGAAGACGCAACACACGAGCTTGGAGAAGATTTATCAGTGTCCAAAGTGtccaaaaaaatttgctttcaaacaaaagttgagTTTTCATCTAAAGTCTGTTCACACTACTCTAAGAGCGTATCTTTGCGAGGATTGCGGTGCAGATTTCAAGAATCCCGCAAGTTTAAGACATCATAGAATCCGAAAACATCAACCGGTTGGAAATAAGAGGGAATGTCAAGTTTGCAGAAAATTGGTGCCGTTTTACAGTTTGTCGAAACACATGCACACGCACAAAGCCTATAGTATCCAATGTCCACATTGCGACAAAATGTTCAAGAACAGCTCGACTTTGAAGCAACATGTGAGAATTCATGAAGATCAAAGGCAGTATCGTTGTGACACTTGCGGCGTGGGATTTAATCGGAGGGACGGTTTGAGGCTACATATGAGAGTGCACGAAAAAACCGGTAGTAGAGGCTTGAAAGAATGTTCCTGCCAAGTTTGTGGGGAAAAGTTTCCAAATCATTCGACTTTGGTGATTCATAGGAACAGAGTGCACAAGGATGGGAGGCAGTATACGTGTCACATTTGTAACAGGTCAATGATTTCGGCAAGATCGCTCGAGTGGCACATGTCGCACATTCATAACGAGTCGATGCCAGGCATTATCCACGACGAATCTGGTCTGCCTGAAAAGAAACGAGTTTCCTGCTATCATTGCAATAAGACTTTCAAGACGGAGCTGATTCTTCGTacacacataaaaaatacgcACATGGAGAAGGACCCGTTAAAGTGCACCGACTGCGAGGCTATTTTTACATCCGAAGTGCGTCTCCGTCATCATATGATGGTCGTCCATAATCGTCTCGAGGGTACTTTGGCATGCCCTCACTGTCCGAAACGATTCGTGAATCAGTTAAGGCTAAAGACTCACATGATCTCTCATTCTGAGGAAAGGCCATATACCTGCGAGATTTGCGGTTTCAACCTCAAGACAAAGATCCAGTTGATCAAGCATCATCAAAACCGGCACAGCGATGAAAGACCTTTGCAGTGCAGGTATTGTCCTTGGCGATGCAAGCAAGTGAGTGCTCTTGTTTGCCACGAGCGCACGCATACCAATGAACGTCCATATTCATGTAGCGTATGCCGGCAACGTTTCAAATATCTTGGCGACAAAAACAAGCATGAACGTCGTCACGAGAGCCTCGGTGGTTCAGGCTTCAAGCGTATTGTACCCGGAAGGAATGTCAAACCGAAGACACGCACCGGAGATTCCGACGGATCCGAGCAAGAGCAGGGTCTCCTCAAGGAATCGGCAAGTCAACGGGACATTCAGGTTACTCAAGAGCAATACGAGGAACAGCAGGAGGAAGGACAATATAGTCAGAAATTTTCGGAGGAACAAATGATCAAGTTCGAACAGGAGCAGATTGTCAAATTTGAAGGTCAAGAGGAATATGAACAAGTGTACGAACAGGAGTATGAAGAAACTTCGAGAGAAGCATCAGAAGCTACCGAGGTAATTATGAACATGGAAGATTCCAATGTATATACAGAGGAGGTTACGGCCGATAATATAGAATCTGGCGCGGAGATCATAACAGATGAGTTGATGACGAATGACATTCTGCAATCTGGCACTGCTGTTGTGCATCTGCAACGCGAAGACTCGGGGAAGATTCAAATGATACCAGTAGTGCTGTCTCTGCCCGACTTATCCGACGCAAGCAGCGAAGTTACCGCATCAATTATGTATAACAACTAG
- Protein Sequence
- MPNPEISKRDHNYSESKSQYANNSVDGVISKIPKTGSIVGQIRDINELKKIAPRVRLQDTESLTNELTRISSLNNHKSQQNNSSVLERTRQELRKYCRTCAGLKLPLVDIFSEKGIKLRLSQQIKHLEVNPYDSPCTQMCMDCICDLRMSYKFFMQIKKAEIKLKSIQVNLTTDNVTKKVMPIDVSSAMKEEKQSSYSETKQEYQLTSAIQQNPSLFHQNPTPTKHENQTISGSQADDSVPKICAIFSLNESKVKKDFGKEEEEEEKEEDNDEEEVVQISGGIFEEVAEGEDEESIEEFDPEDPALMEDEQEEEEEEEEKEGLSRSLKTVYKYDMAADSYVRVEGNDERVSVESEASQTSGNENLREGMRQPNILKRKLVTSNKNDGEDEVQNIVEQHKAQKLDSNNLLNINNPPEEDGIMYVTVKGSKPNEILLVKVKKMDKPMESKRAVTSADLKPVERFLKRYETLTSKDFSSRRPDAREQIIEEQIEEYKKKREKVLGGQSFNVNETQRKIPEEEISVNMNFEKAQEEMTVPKEVDGEREEKEEEEEEEEEEEEGEEEEEERIKIKQEDEEVEEEEDKKEEAEEEEEQEEEGEKMEKSNEKIDEGQEKANDNTEEYFSKLSRLKLKWEETKRKKESLQKELNASYNEGNLEKLAKVLGEQENLQEFQEYLKQRKIVLTRLKDEDIISLYEDRFSTTLKSLPKSLPDLIDTQPPSDPLSEERYLECDYCSETFSNRDVLEEHLKSHDYRMLHYCDDCGEEFQTNKAKRNHNVICVKKLICKYCDIILDSRGKKRQHEQKHVDALYGQLCEVCGERFKHQGTLDQHLKTQHTSLEKIYQCPKCPKKFAFKQKLSFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPVGNKRECQVCRKLVPFYSLSKHMHTHKAYSIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMRVHEKTGSRGLKECSCQVCGEKFPNHSTLVIHRNRVHKDGRQYTCHICNRSMISARSLEWHMSHIHNESMPGIIHDESGLPEKKRVSCYHCNKTFKTELILRTHIKNTHMEKDPLKCTDCEAIFTSEVRLRHHMMVVHNRLEGTLACPHCPKRFVNQLRLKTHMISHSEERPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCSVCRQRFKYLGDKNKHERRHESLGGSGFKRIVPGRNVKPKTRTGDSDGSEQEQGLLKESASQRDIQVTQEQYEEQQEEGQYSQKFSEEQMIKFEQEQIVKFEGQEEYEQVYEQEYEETSREASEATEVIMNMEDSNVYTEEVTADNIESGAEIITDELMTNDILQSGTAVVHLQREDSGKIQMIPVVLSLPDLSDASSEVTASIMYNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01423842;
- 90% Identity
- -
- 80% Identity
- -