Basic Information

Insect: Aphaenogaster floridana
Gene Symbol: -
Assembly: GCA_003063835.1
Location: NJRP01000798.1:1353-8560[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 8.2e-05 0.0095 16.8 0.2 2 23 673 694 672 694 0.97

2 17 0.67 78 4.5 2.8 1 19 700 718 700 719 0.91

3 17 0.81 94 4.2 0.5 2 23 727 748 726 748 0.95

4 17 0.00011 0.013 16.4 1.3 3 23 757 778 756 778 0.98

5 17 0.0024 0.27 12.2 2.0 1 23 785 808 785 808 0.95

6 17 8.3e-05 0.0097 16.8 0.7 1 23 814 837 814 837 0.94

7 17 5.9 6.9e+02 1.5 1.8 3 23 846 865 845 865 0.83

8 17 1.2e-07 1.4e-05 25.7 2.1 2 23 871 892 870 892 0.97

9 17 2e-06 0.00023 21.9 0.2 1 23 898 920 898 920 0.99

10 17 0.00049 0.057 14.4 2.4 2 23 932 954 931 954 0.95

11 17 0.0069 0.8 10.7 2.5 1 23 960 983 960 983 0.96

12 17 0.025 2.9 9.0 2.8 2 23 1004 1026 1003 1026 0.94

13 17 0.00022 0.025 15.5 0.5 2 23 1033 1055 1032 1055 0.96

14 17 5e-05 0.0058 17.5 1.0 3 23 1064 1084 1062 1084 0.96

15 17 0.0011 0.12 13.3 2.3 1 23 1090 1113 1090 1113 0.96

16 17 0.29 33 5.7 3.2 2 23 1120 1141 1119 1141 0.96

17 17 0.0084 0.97 10.5 2.6 1 23 1147 1169 1147 1169 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	8.2e-05	0.0095	16.8	0.2	2	23	673	694	672	694	0.97
2	17	0.67	78	4.5	2.8	1	19	700	718	700	719	0.91
3	17	0.81	94	4.2	0.5	2	23	727	748	726	748	0.95
4	17	0.00011	0.013	16.4	1.3	3	23	757	778	756	778	0.98
5	17	0.0024	0.27	12.2	2.0	1	23	785	808	785	808	0.95
6	17	8.3e-05	0.0097	16.8	0.7	1	23	814	837	814	837	0.94
7	17	5.9	6.9e+02	1.5	1.8	3	23	846	865	845	865	0.83
8	17	1.2e-07	1.4e-05	25.7	2.1	2	23	871	892	870	892	0.97
9	17	2e-06	0.00023	21.9	0.2	1	23	898	920	898	920	0.99
10	17	0.00049	0.057	14.4	2.4	2	23	932	954	931	954	0.95
11	17	0.0069	0.8	10.7	2.5	1	23	960	983	960	983	0.96
12	17	0.025	2.9	9.0	2.8	2	23	1004	1026	1003	1026	0.94
13	17	0.00022	0.025	15.5	0.5	2	23	1033	1055	1032	1055	0.96
14	17	5e-05	0.0058	17.5	1.0	3	23	1064	1084	1062	1084	0.96
15	17	0.0011	0.12	13.3	2.3	1	23	1090	1113	1090	1113	0.96
16	17	0.29	33	5.7	3.2	2	23	1120	1141	1119	1141	0.96
17	17	0.0084	0.97	10.5	2.6	1	23	1147	1169	1147	1169	0.98

Sequence Information

Coding Sequence: atgccAAACCCTGAAGTCAACAAGCGTGATCACAATTACAGTGAATCAAAACCTCAACATGCCAACAATGATAATGGTCCTATCAGTAAGGTATCTAAAACAGGGTCTATCATGGGTCAGATTAGAGACATCGATGAACTGAAGAAGATTGCGCCACGCGTCCGTCTACAGGACACCGAAAGCTTGAACGAGTTGACAAGGATCTCGTCTTTAAATAACAGCAAGTCACAGCAGAGCAATACATCCATTCTCGAGAAAACGCAACAAGAGTTGAGAAAATACTGCCGTACCTGCGCTGGCCTAAAATTGCCCTtgGTGGACATCTTTAGTGAGAAGGGTATCAAATTGCGATTGAGTCAGCAAATTAGGCATCTCGAAGTGAATCCTTATGATAGTCTTTCCACGCAGATGTGCATGGACTGTATCTGCGATCTTAGAAtcagttataaatttttcatgcaGATAAAAAAAGCTGAGATAAAACTCAAATCTATCCATGTCAATCTCACAACTGATAATGCTGCGAAGAAAGTAACACTGATTGACGAGTCTTCGACAACAAAAGAGGAGAAACAACCATCTTATTCAGATACAAAGCAGGAATGCCAATTATCCTCCATAATCCAACAAAACCTATCGTTAACGAAGCAAGAGAATCAAGTAACTCCCGGAAATTTAACAGACAACTCTGTTCCTAAAATCTGTGCCATCTTTTCGTTAAAAAACGAATTGCAGGTAAACTCTgaaaaagaggaggaggaggaggaagataacaacgaggaggaggaagaagaggtaGTACAAATGGGAGGAGGAATATTCGAGGAAGTGGCAGAGGGAGAGGATGAAGAATCCATCGAGGAATTTGATCCCGAAGATCCTGCGCTCTTGGAagatgaagaggaagaagaacaAGAACCTTCAAGACCCCCAGCAACCGTCTACAAGTACGATATGGCAGCAAAGTCTTATGTGAGGGTGGAAGGAAATGAGGAAGGAGTTTCCGTGAAATCTGAAATCTCGCAGACTTCAGAGGGCGAAGGAGAAAATCAAAGAGAGGGAATGAGGCAGCCgaatattttgaaaagaaaactGGTAATGCCAACGATAACGACGAAGAATGAAGGAGAAAACGAAGTACAGAGCGGAGTGGACGGATACAAGTTGCAAAAGTTAGATACGAATAATCTGTTGAATATGAATAGTCCTTCAGAAGAAGATGGAATTATGTATGTAACTGTAAAGGGATCCAAGCCGAACGAAATTCTTTTGGTGAAGGTCAAGAAAATGGACAAACCCATGGAATCCAAGCGTCCGGTAACCTCCGCTGAGCCCGTTGAGCGGTTTCTCAAACGTTACGAAACGCTGATATCGAAGGATTTCTCATCTCGACGTCCTGACGCCCGCGAGCAAATAATTGAAGAGCAAAtcgaagaatataaaaagaaacgtgAAAAAGTCTTTGGAGGTCAGTCAGTAATAACGTTCACCGTGAACGAAACACAGAAAGAAGTACAAGAAGAAGAGATTTCCGTCAAGTCAAATTTTGAAAAGGCGGAAGAAGAAATGACGAAAGAAATTTCGAAAGAAGAggatgaagagagagaggaaggggaggaggaagagaagatgGAGAAGGGTGAAAGAATTGACGAAGGTCAAGAAAAGACCATTGATAATACAGAGGAATATCTTTCAAAGTTATCGAGATTGAAACTAAAGTGGGAAGAGACAAAGCGGAAAAAGGAAAGTTTGCAAAAGGAACTGGACGAGTCGTATAGCGAAGGGAATTTGGAAAAATTGGCGAAAGTCTTGGgggaaaaggaaaagaatctgcagGAATTCCAGGAGTACCTGAAGCAGCGTAAAATCGTTCTTACTCGCCTCAAGGACCAGGATATAATCTCCCTCTATGAAGATCGATTCTCCACCACTTTAAAATCACCCCCTAAATCGCTCCCAGACCTTATCGACGTTCAACCTCCAATCGATCCTCTTACCGAAGAGCGCTATCTAGAATGCGATTACTGTTCCGAAACCTTCTCTAACCGCGATGTTCTTGAGGAACATCTCAAGTCCCACGACTATCGTATCCTTCATTGTTGCGACGACTGCGGGGAAGAATTTCAAACCAATAAAGCGAAAAGAAATCATAATGTGATTTGTGTGAggaaattaatttgcaaatattgCGACATAATTCTAGATTCCAGAGGGAAAAAACGTCAACATGAGCAGAAACATGTTGATGCTCTTTACGGTCAACTTTGCGAGGTGTGTGGGGAAAGATTCAAACACCAAGGAACCCTCGACCAGCATCTGAAGACGCAACATACGAGTTTGGAAAAGATTTATCAATGTCCAAAGTGTCCAAAAAAATTTGCTTTCAAGCAAAAGCTGAGCTTTCATTTAAAATCTGTTCACACAACTTTAAGAGCATATCTTTGCGAGGATTGCGGTGCGGATTTTAAGAATCCTGCGAGTTTGAGACATCATAGAATAAGAAAACATCAACCGGTTGGAAATAAGAGAGAATGTCAGGTTTGCAGGAAATTGGTGCCATTTTACAGTTTATCGAAACACATGCACACGCATAAAGCTTACAGTATCCAGTGTCCACATTGcgataaaatgttcaaaaacaGCTCGACCTTGAAGCAACATGTGAGAATTCACGAAGATCAGAGGCAGTATCGTTGTGACACCTGCGGCGTTGGATTTAATCGGAGGGATGGTTTAAGATTGCATATGAGAGTGCACGAAAAAACTGGTAGTAGAGGCTTGAAAGAATGTTCCTGCCAAGTTTGTGGGGAAAAGTTCCCGAATCATTCAACTTTGGTGATTCATAGGAACAGAGTACACAAGGATGGGAGGCAGTATACGTGTCACATTTGTAACAGGTCGATGATTTCGACGAGATCGCTCGAGTGGCACATGTCGCACATTCATAATGAGACGATGCCAGgTATTATCCGCGACGAGTCTGGTCTGCTTGAAAAAAAACGAGTTTCCTGCTATCATTGCAATAAGACGTTCAAAACAGAACTGATTCTTCGCACACACATTAAAAATACGCATATGGAGAAGGATCCGTTGAAGTGCACCGACTGCGAGGCTGTTTTCACATCCGAAGTGCGTCTACGTCATCACATGATGGTCGTGCACAATCGTCTCGAGGGTACTTTGGCATGTCCTCACTGTCCGAAACGATTCGTGAACCAATTAAGGCTAAAGACCCACATGATCTCTCATTCTGAAGAAAGGCCATATACCTGTGAGATCTGCGGTTTCAATCTGAAGACAAAAATCCAGCTGATCAAGCATCATCAAAATCGACACAGCGATGAGAGACCTTTGCAGTGCAGGTATTGTCCTTGGCGATGCAAGCAAGTGAGTGCCCTCGTTTGCCACGAGCGCACCCATACCAATGAACGCCCATATTCGTGTAGCGTATGCCGGCAACGTTTCAAATATCTAGGCGACAAAAACAAGCACGAACGTCGTCACGAGAGCCTTGGTGGTTCAGGCTTCAAGCGTATCGTACCCGGAAGGAATGTCAAGCCGAAGATGCAGGCCGAAGATTCCTCTGGATCCGAGCAGGACCAGAGTTCGCTCAAGAACTCGGCGAATCAACAGAATGCTCAACAGATTACCGAAGAACAATACGAAGAGCAGCAGGAGGAACAGTATGATGAGAAATTTCCGGAAGAGCAGATAGTCAAGTTCGAACAGGGGCAGATCGTCAAGTTTGAAGATCAAGAGGAATACGAACAGGTGTACGAGCAGGAGTATGAAGAAACTTCGAGAGAAGCATCGGAAGCTACCGAGGTAATTATGAACATGGAAGATTCCAATGTATACACAGAGGAGGTTACGGCCGATAATATAGAGTCTGGGGCGGAGATTATGACAGACGAGATGATGACGAGTGACATTCTGCAATCTGGCACTGCTGTGATGCATCTGCAAAGCAAAGATGGCTCGGGGAAGATCCAAGTTATACCAGTGATGCTGTCGCTACCCGATCTGTCCGACGCAAACAACGAAGTTAATCTCGCGACCGCGTCAATCatgtataataattag
Protein Sequence: MPNPEVNKRDHNYSESKPQHANNDNGPISKVSKTGSIMGQIRDIDELKKIAPRVRLQDTESLNELTRISSLNNSKSQQSNTSILEKTQQELRKYCRTCAGLKLPLVDIFSEKGIKLRLSQQIRHLEVNPYDSLSTQMCMDCICDLRISYKFFMQIKKAEIKLKSIHVNLTTDNAAKKVTLIDESSTTKEEKQPSYSDTKQECQLSSIIQQNLSLTKQENQVTPGNLTDNSVPKICAIFSLKNELQVNSEKEEEEEEDNNEEEEEEVVQMGGGIFEEVAEGEDEESIEEFDPEDPALLEDEEEEEQEPSRPPATVYKYDMAAKSYVRVEGNEEGVSVKSEISQTSEGEGENQREGMRQPNILKRKLVMPTITTKNEGENEVQSGVDGYKLQKLDTNNLLNMNSPSEEDGIMYVTVKGSKPNEILLVKVKKMDKPMESKRPVTSAEPVERFLKRYETLISKDFSSRRPDAREQIIEEQIEEYKKKREKVFGGQSVITFTVNETQKEVQEEEISVKSNFEKAEEEMTKEISKEEDEEREEGEEEEKMEKGERIDEGQEKTIDNTEEYLSKLSRLKLKWEETKRKKESLQKELDESYSEGNLEKLAKVLGEKEKNLQEFQEYLKQRKIVLTRLKDQDIISLYEDRFSTTLKSPPKSLPDLIDVQPPIDPLTEERYLECDYCSETFSNRDVLEEHLKSHDYRILHCCDDCGEEFQTNKAKRNHNVICVRKLICKYCDIILDSRGKKRQHEQKHVDALYGQLCEVCGERFKHQGTLDQHLKTQHTSLEKIYQCPKCPKKFAFKQKLSFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPVGNKRECQVCRKLVPFYSLSKHMHTHKAYSIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMRVHEKTGSRGLKECSCQVCGEKFPNHSTLVIHRNRVHKDGRQYTCHICNRSMISTRSLEWHMSHIHNETMPGIIRDESGLLEKKRVSCYHCNKTFKTELILRTHIKNTHMEKDPLKCTDCEAVFTSEVRLRHHMMVVHNRLEGTLACPHCPKRFVNQLRLKTHMISHSEERPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCSVCRQRFKYLGDKNKHERRHESLGGSGFKRIVPGRNVKPKMQAEDSSGSEQDQSSLKNSANQQNAQQITEEQYEEQQEEQYDEKFPEEQIVKFEQGQIVKFEDQEEYEQVYEQEYEETSREASEATEVIMNMEDSNVYTEEVTADNIESGAEIMTDEMMTSDILQSGTAVMHLQSKDGSGKIQVIPVMLSLPDLSDANNEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01423842;
90% Identity: iTF_00127665; iTF_00128435; iTF_00129941; iTF_00129198; iTF_00126170;
80% Identity: -