Basic Information

Insect: Temnothorax longispinosus
Gene Symbol: -
Assembly: GCA_004794745.1
Location: QBLH01001030.1:26381-33938[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 6.9e-05 0.0054 16.7 0.2 2 23 757 778 756 778 0.97

2 17 0.4 31 4.8 2.8 1 19 784 802 784 803 0.91

3 17 3.3 2.6e+02 2.0 0.6 2 23 811 832 810 832 0.94

4 17 5.3e-05 0.0042 17.0 1.4 3 23 841 862 840 862 0.98

5 17 0.0028 0.22 11.6 1.1 1 23 869 892 869 892 0.95

6 17 7e-05 0.0055 16.7 0.7 1 23 898 921 898 921 0.94

7 17 3.3 2.6e+02 1.9 1.5 3 23 930 949 929 949 0.86

8 17 1e-07 8e-06 25.6 2.1 2 23 955 976 954 976 0.97

9 17 1.7e-06 0.00013 21.8 0.2 1 23 982 1004 982 1004 0.99

10 17 0.00041 0.032 14.2 2.4 2 23 1016 1038 1015 1038 0.95

11 17 0.0058 0.46 10.6 2.5 1 23 1044 1067 1044 1067 0.96

12 17 0.021 1.6 8.9 2.8 2 23 1136 1158 1135 1158 0.94

13 17 0.0062 0.48 10.5 0.6 2 23 1165 1187 1164 1187 0.96

14 17 4.2e-05 0.0033 17.3 1.0 3 23 1196 1216 1194 1216 0.96

15 17 0.0016 0.13 12.4 2.3 1 23 1222 1245 1222 1245 0.96

16 17 0.24 19 5.5 3.2 2 23 1252 1273 1251 1273 0.96

17 17 0.0071 0.55 10.4 2.6 1 23 1279 1301 1279 1301 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	6.9e-05	0.0054	16.7	0.2	2	23	757	778	756	778	0.97
2	17	0.4	31	4.8	2.8	1	19	784	802	784	803	0.91
3	17	3.3	2.6e+02	2.0	0.6	2	23	811	832	810	832	0.94
4	17	5.3e-05	0.0042	17.0	1.4	3	23	841	862	840	862	0.98
5	17	0.0028	0.22	11.6	1.1	1	23	869	892	869	892	0.95
6	17	7e-05	0.0055	16.7	0.7	1	23	898	921	898	921	0.94
7	17	3.3	2.6e+02	1.9	1.5	3	23	930	949	929	949	0.86
8	17	1e-07	8e-06	25.6	2.1	2	23	955	976	954	976	0.97
9	17	1.7e-06	0.00013	21.8	0.2	1	23	982	1004	982	1004	0.99
10	17	0.00041	0.032	14.2	2.4	2	23	1016	1038	1015	1038	0.95
11	17	0.0058	0.46	10.6	2.5	1	23	1044	1067	1044	1067	0.96
12	17	0.021	1.6	8.9	2.8	2	23	1136	1158	1135	1158	0.94
13	17	0.0062	0.48	10.5	0.6	2	23	1165	1187	1164	1187	0.96
14	17	4.2e-05	0.0033	17.3	1.0	3	23	1196	1216	1194	1216	0.96
15	17	0.0016	0.13	12.4	2.3	1	23	1222	1245	1222	1245	0.96
16	17	0.24	19	5.5	3.2	2	23	1252	1273	1251	1273	0.96
17	17	0.0071	0.55	10.4	2.6	1	23	1279	1301	1279	1301	0.98

Sequence Information

Coding Sequence: atGCCGAATCCCGAAATCAATAAACGCGATCACAATTACAGTGAATCGAAACCTCAACATGCCAACAATGGTAATGGTGGCGCTATCTGCAAGATATCCAAGACAGGATCTGTCGGGGGTCAGATTAGAGACATCAACGAACTGAAGAAGATTGCGCCGCGCGTTCGTCTACAGGACACTGAAAGTTTGAACGAGTTGACGAGGATCTCTTCTTTAAGTAACAGTAAATTACAGCAGAACGATACATCCGTTCTCGAGAGAACGCGGCAAGAACTGAGAAAATACTGCCGCACCTGCGCTGGCCTAAAACTGCCCttgGTGGACATCTTTAGTGAAAAGGGCATTAAATTGCGATTGAGTCAGCAAATCAAGCATCTCGAAGTGAATCCTTATGATAGTCTCTCGACACAGATGTGCATGGACTGTATCTGCGATCTTAGAatgagttataaatttttcatgcagataaaaaaagctgagataaaattgaaatctatCCATGTCAATCTCACGACTGATAATGCCACGAAGAAAGTAACGTTGATCGACGAGTCTTCGACAATAAAAGAGGAGATGCAATCATCTTATATAGagaaaggaaagaagataaaaatgataacatATTGCAGAAATAAGGAAAATTCTTTTCCTCCAGAAACAAAGCAGGAATATCAATTATCCTCTACAATCCAACAAAACCTATCTTCATTGTCATCGAAGCAAGAAAACCAAACAACTCCCGGAAATCAAGCAGATGACTCTGTTCCAAAAATTTGTGCCATCTTTTCGTTGAAGGACGAATCGAAGGTAAAATCTGGAAAGGAGAAGGAAGACAatgacgaggaggaggaggaggaggaggaggaggaagaggtaCAGATAGGCGGAGGGATATTTGAGGAAGTGGCAGAGGGAGAGGATGAAGAATCTATCGAGGAATTTGATCCTGAAGACCCTGCACTCCTggaagatgaagaagaagaagaagaaaaaaaatctccaaGATCCCCAACAACCGTCTATAAGTACGATATGGCAGCAAAGTCTTACGTGAGGTTGGAAAGAAGTGAAGAGGGAGTTTCTGTGAAATCTGGAGCTTCCCAGACTTTGGAAGGTGACGGAGAAAATCAAAGAGAGGGAATAAGCAAGCCAAATATCttgaagagaaaattaataatgccaACGGTAACGACGAAGAATGgtggggaggaggaggaggacgaggtACAAAGTATCGAAGAGCGCAAAGTGCAAAAGTTAGACACAAACAGTCTCTCGAATGTGAATAGTCCTCTAGAAGAGGATGGAATTATGTACGTAACTGTAAAGGGCTCCAAACCGAACGAGTTTCTTCTAGTGAAGGTGAAGAAAGTGGACAAACCCATGGAATCAAAGCGCGCGGTAATCTCCACTGATTTTAAGCCTGTCGAACGTCTTCTCAAACGTTATGAAACGTTGACATCGAAAGATTTCTCATCTAGACGTCCTGACGGCCGCGAGCAAATAATTGAAGAACAAAtcgaagaatataaaaagaaacgagaaaaggTTCTTGGAGGTCAGTCGGTAGTGACGTTCACCGTGAACGAAACGCAAAAAGAAGTACAGCAGGAAGAAATTTCCTCCAAGTCAAATTTTGAAAAGGCAGAAGAAATGACACTTTTGACAAAAGTGGAAGCTGGAGTGAAGGAGGAGCGGGAGCAAGAGCAAGAgcaagaggaggaggaggaggaggagcagGAGGAGCAGGAGCAGGAGGAGCAGCAGGAGGAGCAGCagcaggaggaggaggaagaggaggaggacgaggaggacgaggaggaggaggagaaagaagagggGAATGGAGATGGGGATGGagataaagaagagaaagagtttTGGAATAAGATGGAAAATATTGACGAAAGTCAAGAAAAGGTCCATGAATATACAGAGGAATATCTTTCAAAGTTATCAAGATTGAAATTAAAGTGGGAAGAGACGAAACGGAAAAAGGAAAGTTTACAGAAGGAACTGAACGAGTCGTATAGCGAAGGGAACTTGGAGAAATTGGCAAAAGTCTTGggggaaaaggaaaagaatcTGCAGGAATTCCAAGAGTACTTGAAGCAGCGTAAAATCGTTCTTACTCGCCTCAAGGACGAAGACATAATCTCTCTCTATGAAGATCGATTCTCCACTACTTTAAAATCGTCCTCTAAATTGCTCCCAGACCTTATCGACACTCAACCTCCCGTCGACCCGCTTTCCGAAGAGCGCTATTTAGAATGTGATTATTGTTCCGAAACCTTCTCCAACCGCGATGTTCTCGAGGAACATCTCAAGTCCCACGACTACCGTATCCTTCATTGCTGCGACGACTGTGGGGAAGAATTTCAAACCCAGAAAGCGAAAAGAAATCATAACGTGATATGTGTgaggaaattaatttgcaaattttgcgACATAATTCTGGATTCCAGAGGGAAAAAACGTCAACACGAGCAGAAACACGTTGACGCTCTTTATGGTCAACTTTGCGAGATTTGTGGCGAGAGATTCAAACACCAAGGAACTCTGGACCAGCACCTGAAGACGCAACACACGAGTTTGGAAAAGATTTATCCGTGTCCAAAGTGTCCGAAAAGATTtgcttttaaacaaaaactgAGCTTTCACTTAAAATCTGTTCATACAACTTTGAGAGCGTACCTTTGTGAGGATTGCGGTGCGGATTTTAAGAATCCTGCGAGCTTGAGACATCATAGAATCAGAAAACATCAACCGGTTGGAAATAAAAGGGAATGTCAAGTTTGCAGCAAATTGGTGCCGTTTTACAGTTTGTCCAAGCACATGCACACGCATAAAGCTTACAGTATCCAGTGTCCACATTGCGacaaaatgttcaaaaatagCTCGACCTTGAAGCAACATGTGAGAATTCACGAAGATCAAAGGCAGTATCGTTGTGACACCTGCGGCGTTGGATTTAATCGGAGAGACGGTTTGAGGCTGCATATGAGAGTGCACGAAAAAACTGGTAGTAGAGGCTTGAAAGAGTGTTCCTGCCAAGTATGTGGCGAAAAGTTTCCGAATCATTCGACTTTGGTGATTCATAGGAACAGAGTGCACAAAGATGGGAGGCAGTATACGTGTCACATTTGTAACAGGTCGATGATTTCGACGAGATCGCTCGAGTGGCACATGTCGCACATTCATAACGAGTCGATGCCAGATGGAATTTTCgataatggaaaaataatttctagatTTGTACAACGTACGTTGTTATGTTTTTGTTTCGTACTTCCATTCAgacgacacacacacacacagacacacacattTGCAGCAACAATAATGATAATCTCTTTTGCAGGTATTATCCGCGACGCGTCTGGTCTGCCTGAAAAAAAACGGGTTTCCTGCTATCACTGCAATAAGACCTTCAAGACGGAACTAATTCTTCGcacacatattaaaaatacgcaCATGGAGAAGGACCCGTTGAAGTGCACCGACTGCGAGGATATTTTCACATCTGAAGTACGTTTACGTCATCACATGATGGTCGTGCACAATCGTCTCGAGGGTACTTTGGCATGCCCTCATTGTCCGAAACGATTCGTGAACCAATTAAGGCTAAAGACTCACATGATTTCTCATTCTGAGGAAAGGCCGTATACCTGCGAGGTCTGCGGTTTCAACCTGAAGACAAAGATCCAACTGATCAAGCATCATCAAAACCGACACAGTGACGAGAGACCTTTGCAGTGCAGGTACTGTCCTTGGCGATGCAAGCAAGTGAGTGCTCTCGTTTGTCACGAACGCACGCATACCAATGAACGCCCATATTCGTGCAGCGTGTGCCGGCAACGCTTCAAATATCTCGGTGACAAAAACAAGCATGAACGTCGTCACGAGAGCCTCGGTGGTTCAGGCTTCAAGCGTATCGTACCTGGAAGAAATGTCAAACCGAAAGTACGCGCCGCCGACGATTCCTCCGGATCTGAGCAGGAACCGGGCTCGCTCAAGGATTCGGCGAAGGAGCAATACGAGGAGCAGCAGGAAGGACAATACGATCAGAAATTTCCGGAGGAACAGATGGTCAAATTCGAACGGGAGCAGATTGTCAAGTTTGAAGGTCAAGAGGAATACGAACAAGCGGTGTACGAGCAGGAGTATGAAGAAACTTCGAGAGAAGCATCGGAAGCTACCGAGGTAATTATGAACATGGAGGATTCCACGGTGTACACGGAGGAGGTTACGGCTGATAATATAGAGCCTAGCGTAGAGATCATGACGGACGAGATAATGACGAGTGACATTCTACAATCTGGCACTGCTGTGATGCATCTGCAAGGTTGCAATAATTCCTCGGGGGAGATTCAAGTGATACCAGTGATGCTGTCCCTGCCCGAGCTGTCCGACGCAACCACTGAAGTAAATCTCGCGACCGCGTCaatcatgtataataattag
Protein Sequence: MPNPEINKRDHNYSESKPQHANNGNGGAICKISKTGSVGGQIRDINELKKIAPRVRLQDTESLNELTRISSLSNSKLQQNDTSVLERTRQELRKYCRTCAGLKLPLVDIFSEKGIKLRLSQQIKHLEVNPYDSLSTQMCMDCICDLRMSYKFFMQIKKAEIKLKSIHVNLTTDNATKKVTLIDESSTIKEEMQSSYIEKGKKIKMITYCRNKENSFPPETKQEYQLSSTIQQNLSSLSSKQENQTTPGNQADDSVPKICAIFSLKDESKVKSGKEKEDNDEEEEEEEEEEEVQIGGGIFEEVAEGEDEESIEEFDPEDPALLEDEEEEEEKKSPRSPTTVYKYDMAAKSYVRLERSEEGVSVKSGASQTLEGDGENQREGISKPNILKRKLIMPTVTTKNGGEEEEDEVQSIEERKVQKLDTNSLSNVNSPLEEDGIMYVTVKGSKPNEFLLVKVKKVDKPMESKRAVISTDFKPVERLLKRYETLTSKDFSSRRPDGREQIIEEQIEEYKKKREKVLGGQSVVTFTVNETQKEVQQEEISSKSNFEKAEEMTLLTKVEAGVKEEREQEQEQEEEEEEEQEEQEQEEQQEEQQQEEEEEEEDEEDEEEEEKEEGNGDGDGDKEEKEFWNKMENIDESQEKVHEYTEEYLSKLSRLKLKWEETKRKKESLQKELNESYSEGNLEKLAKVLGEKEKNLQEFQEYLKQRKIVLTRLKDEDIISLYEDRFSTTLKSSSKLLPDLIDTQPPVDPLSEERYLECDYCSETFSNRDVLEEHLKSHDYRILHCCDDCGEEFQTQKAKRNHNVICVRKLICKFCDIILDSRGKKRQHEQKHVDALYGQLCEICGERFKHQGTLDQHLKTQHTSLEKIYPCPKCPKRFAFKQKLSFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPVGNKRECQVCSKLVPFYSLSKHMHTHKAYSIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMRVHEKTGSRGLKECSCQVCGEKFPNHSTLVIHRNRVHKDGRQYTCHICNRSMISTRSLEWHMSHIHNESMPDGIFDNGKIISRFVQRTLLCFCFVLPFRRHTHTQTHTFAATIMIISFAGIIRDASGLPEKKRVSCYHCNKTFKTELILRTHIKNTHMEKDPLKCTDCEDIFTSEVRLRHHMMVVHNRLEGTLACPHCPKRFVNQLRLKTHMISHSEERPYTCEVCGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCSVCRQRFKYLGDKNKHERRHESLGGSGFKRIVPGRNVKPKVRAADDSSGSEQEPGSLKDSAKEQYEEQQEGQYDQKFPEEQMVKFEREQIVKFEGQEEYEQAVYEQEYEETSREASEATEVIMNMEDSTVYTEEVTADNIEPSVEIMTDEIMTSDILQSGTAVMHLQGCNNSSGEIQVIPVMLSLPELSDATTEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01423842;
90% Identity: iTF_01407605;
80% Identity: -