Basic Information

Insect: Temnothorax nylanderi
Gene Symbol: -
Assembly: GCA_030848795.1
Location: JASTWM010000388.1:109787-117550[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00012 0.018 16.7 0.2 2 23 738 759 737 759 0.97

2 17 0.95 1.5e+02 4.4 2.8 1 19 765 783 765 784 0.91

3 17 1.2 1.8e+02 4.2 0.5 2 23 792 813 791 813 0.95

4 17 9e-05 0.014 17.1 1.4 3 23 822 843 821 843 0.98

5 17 0.0034 0.52 12.1 2.0 1 23 850 873 850 873 0.95

6 17 0.00012 0.018 16.7 0.7 1 23 879 902 879 902 0.94

7 17 5.7 8.8e+02 2.0 1.5 3 23 911 930 910 930 0.86

8 17 1.7e-07 2.7e-05 25.6 2.1 2 23 936 957 935 957 0.97

9 17 2.8e-06 0.00044 21.8 0.2 1 23 963 985 963 985 0.99

10 17 0.0007 0.11 14.3 2.4 2 23 997 1019 996 1019 0.95

11 17 0.0099 1.5 10.7 2.5 1 23 1025 1048 1025 1048 0.96

12 17 0.036 5.6 8.9 2.8 2 23 1069 1091 1068 1091 0.94

13 17 0.045 7 8.6 0.5 2 23 1098 1120 1097 1120 0.96

14 17 7.1e-05 0.011 17.4 1.0 3 23 1129 1149 1127 1149 0.96

15 17 0.0027 0.42 12.4 2.3 1 23 1155 1178 1155 1178 0.96

16 17 0.41 64 5.6 3.2 2 23 1185 1206 1184 1206 0.96

17 17 0.012 1.9 10.4 2.6 1 23 1212 1234 1212 1234 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00012	0.018	16.7	0.2	2	23	738	759	737	759	0.97
2	17	0.95	1.5e+02	4.4	2.8	1	19	765	783	765	784	0.91
3	17	1.2	1.8e+02	4.2	0.5	2	23	792	813	791	813	0.95
4	17	9e-05	0.014	17.1	1.4	3	23	822	843	821	843	0.98
5	17	0.0034	0.52	12.1	2.0	1	23	850	873	850	873	0.95
6	17	0.00012	0.018	16.7	0.7	1	23	879	902	879	902	0.94
7	17	5.7	8.8e+02	2.0	1.5	3	23	911	930	910	930	0.86
8	17	1.7e-07	2.7e-05	25.6	2.1	2	23	936	957	935	957	0.97
9	17	2.8e-06	0.00044	21.8	0.2	1	23	963	985	963	985	0.99
10	17	0.0007	0.11	14.3	2.4	2	23	997	1019	996	1019	0.95
11	17	0.0099	1.5	10.7	2.5	1	23	1025	1048	1025	1048	0.96
12	17	0.036	5.6	8.9	2.8	2	23	1069	1091	1068	1091	0.94
13	17	0.045	7	8.6	0.5	2	23	1098	1120	1097	1120	0.96
14	17	7.1e-05	0.011	17.4	1.0	3	23	1129	1149	1127	1149	0.96
15	17	0.0027	0.42	12.4	2.3	1	23	1155	1178	1155	1178	0.96
16	17	0.41	64	5.6	3.2	2	23	1185	1206	1184	1206	0.96
17	17	0.012	1.9	10.4	2.6	1	23	1212	1234	1212	1234	0.98

Sequence Information

Coding Sequence: ATGCCGAATCCCGAAATCAATAAACGCGATCACAATTACAGTGAATCGAAACCTCAACATGCCAACAATGGTAATGGTGGCGCTATCTGCAAGATATCCAAGATAAGATCTATCGTGGGTCAGATTAGAGACATAAACGAACTGAAGAAGATTGCGCCGCGCGTTCGTCTACAGGACACTGAAAGTTTGAACGAGTTGACGAGGATCTCTTCTTTAAGTAACAGTAAATTACAGCAGAACGATACATCCGTTCTCGATAGAACGCGGCAAGAACTGAGAAAATACTGCCGCACCTGCGCTGGCCTAAAACTGCCCTtgGTGGACATCTTTAGTGAAAAGGGCATTAAATTGCGATTGAGTCAGCAAATCAAGCATCTCGAAGTGAATCCTTATGATAGTCTCTCTACACAGATGTGCATGGACTGTATCTGCGATCTTAGAAtgagttataaatttttcatgcaGATAAAAAAAGCTgagataaaattgaaatctatCCATGTCAATCTCACGACTGATAATGCCACAAAGAAAGTAACGTTGATCGACGAGTCTTCGACAATAAAAGAGGAGATGCAATCATCTTATATAGAAACAAAGCAGGAATATCAATTATCCTCTACGATCCAACAAAACCTATCGTCATTGTCATCGAAGCAAGAAAACCAAACAACTCCCGGAAATCAAGCGGATGACTCTGTTCCAAAAATTTGTGCCATCTTTTCGTTGAAGGACGAATCGAAGGTAAAATCTggaaaggagaaggaagacaatgacgaggaggaggaagaggtaCGGATAGGCGGAGGGATATTTGAGGAAGTGGCAGAGGGAGAGGATGAAGAATCTATCGAGGAATTTGATCCTGAAGACCCTGCACTCCTggaagatgaagaagaagaagaagaagaaaaaaaatctccaAGATCCCCAACAACCGTCTATAAGTACGATATGGCAGCAAAGTCTTATGTGAGGTTGGAAAGAAGTGAAGAGGGAGTTTCTGTGAAATCTGGAGCTTCCCAGACGTCGGAAGGTGACGGAGAAAATCAAAGAGAGGGAACGAGCAAGCCAAATATCTtgaagagaaaattaataatgccAACGGTAACGACGAAGAATGGAGGGGAGGACGAGGTACAAAGTATAGTCGAGGAGCGCAAAGTGCAAAAGTTAGACACAAACAGTCTCTCGAATGTGAATAGTCCTCTAGAAGAGGATGGAATTATGTACGTAACTGTAAAGGGCTCCAAACCGAACGAGTTTCTTCTGGTGAAGGTGAAGAAAGTGGACAAACCCATGGAATCAAAGCGCGCGGTAATCTCCACTGATCTTAAGCCTGTCGAGCGTCTCCTCAAACGTTATGAAACGTTGACATCGAAAGATTTCTCATCTCGACGTCCTGACGGCCGCGAGCAAATAATTGAAGAACAAATcgaagaatataaaaagaaacgagAAAAGGTTCTTGGAGGTCAGTCGGCGGCGGTAGTGACGTTCACCGTGAACGAAACGCAAAAAGAAGTACAGGAGGAAGAAATTTCCTCCAAGTCAAATTTTGAAAAGGCAGAAGAAATGACACTTTTGAAAGAAGTGGCTGGAGTGAAGGAGGAGCGGGAGCAAGAgcaagaggaggaggaggaggaggaggagcagGAGGAGCAGGAGGAGCAGCagcaggaggaggaggaggaggacgaggagaacgaggaggacgaggaggacgaggaggaggaggaggaggaggagaaagaagAGGGGAATGGAGATTGGGATGGGGATGGGGATGGAGATGGAGATGGAgataaagaagagaaagagttTTGGAATAAGATAGAAAATATTGACGAAAGTCAAGAAAAGGTCCATGATAATACAGAGGaatatctttcaaaattatcaaGATTGAAATTAAAGTGGGAAGAGACGAAGCGGAAAAAGGAAAGTTTACAGAAGGAACTGGACGAGTCGTATAGCGAAGGGAACTTGGAGAAATTGGCAAAAGTCTTGggggaaaaggaaaagaatctGCAGGAATTCCAAGAGTACTTGAAGCAGCGTAAAATCGTTCTTACTCGCCTCAAGGACGAAGACATAATCTCTCTCTATGAAGATCGATTCTCCACTACTTTAAAATCATCCTCTAAATTGCTCCCAGACCTTATCGACACTCAACCTCCCGTCGACCCGCTTTCCGAAGAGCGCTATTTAGAATGTGATTATTGTTCCGAAACCTTTTCCAACCGCGATGTTCTCGAGGAACATCTCAAGTCCCACGACTACCGTATCCTTCATTGCTGCGACGACTGTGGGGAAGAATTTCAAACCAATAAAGCGAAAAGAAATCATAATGTGATATGTGTGAggaaattaatttgcaaatattgCGACATAATTCTGGATTCCAGAGGGAAAAAACGTCAACATGAGCAGAAACACGTTGACGCTCTTTATGGTCAACTTTGCGAGATTTGTGGCGAGAGATTCAAACACCAAGGAACTCTGGACCAGCACCTGAAGACGCAACATACGAGTTTGGAAAAGATTTATCAGTGTCCAAAGTGTCcgaaaaaatttgcttttaaACAAAAGCTGAGCTTTCACTTAAAATCTGTTCATACAACTTTGAGAGCGTACCTTTGTGAGGATTGCGGTGCGGATTTTAAGAATCCTGCGAGCTTGAGACATCATAGAATCAGAAAACATCAACCGGTTGGAAATAAAAGGGAATGTCAAGTTTGCAGCAAATTGGTGCCGTTTTACAGTTTGTCCAAGCACATGCACACGCATAAAGCTTACAGTATCCAGTGTCCACATTGCGACAAAATGTTCAAAAATAGCTCGACCTTGAAGCAACATGTGAGAATTCACGAAGATCAAAGGCAGTATCGTTGTGACACCTGCGGCGTTGGATTTAATCGGAGAGATGGTTTGAGGCTGCATATGAGAGTGCACGAAAAAACTGGTAGTAGAGGCTTGAAAGAGTGTTCCTGCCAAGTATGTGGGGAAAAGTTTCCGAATCATTCGACTTTGGTGATTCATAGGAACAGAGTGCACAAAGATGGGAGGCAGTATACGTGTCACATTTGTAACAGGTCAATGATTTCGACGAGATCGCTCGAGTGGCACATGTCGCACATTCATAACGAGTCGATGCCAGGTATTATCCGCGACGCGTCTGGTCTGCCTGAAAAAAAACGGGTTTCCTGCTATCATTGCAATAAGACCTTCAAGACGGAACTAATTCTTCGCACACACATAAAAAATACGCACATGGAGAAGGACCCGTTGAAGTGCACCGACTGCGTGGATATTTTCACATCTGAAGTACGTTTACGTCATCACATGATGGTCGTGCACAATCGTCTCGAGGGTACTTTGGCATGCCCTCATTGTCCGAAACGATTCGTGAACCAATTAAGGCTAAAGACTCACATGATTTCTCATTCCGAGGAAAGGCCGTATACCTGCGAGGTCTGCGGTTTCAACCTGAAGACAAAGATCCAGCTGATCAAGCATCATCAAAACCGACACAGTGACGAGAGACCTTTGCAGTGCAgGTACTGTCCTTGGCGATGCAAGCAAGTGAGTGCCCTCGTTTGTCACGAACGCACGCATACCAATGAACGCCCATATTCGTGCAGCGTGTGCCGGCAACGCTTCAAATATCTCGGTGACAAAAACAAGCATGAACGTCGTCACGAGAGCCTCGGTGGTTCAGGCTTCAAGCGTATCGTACCCGGAAGAAATGTCAAACCGAAAGTACGCGCCGCCGACGATTCCTCCGGATCTGAGCAGGAACCGGGCTCGCTCAAGGATTCGGCGAGTCGACAGGACATTCGGGTTACCGAGGAGCAATACGAGGAGCAGCAGGATGGACGATACGATCAGAAATTTCCGGAGGAACAGATGGTCAAATTCGAACAGGAGCAGATTGTCAAGTTTGAAGGTCAAGAGGAATACGAACAAGCGGTGTACGAGCAGGAGTATGAAGAAACTTCGAGAGAAGCATCGGAAGCTACCGAGGTAATTATGAACATGGAGGATTCCACGGTGTACACGGAGGAGGTCACGGCTGATAATATAGAGCCTAGCGTAGAGATCATGACGGACGAGATAATGACGAGTGACATTCTGCAATCTGGCACTGCTGTGATGCATCTGCAACATTGCAATAATTCCTCGGGGGAGATTCAAGTGATACCAGTGATGCTGTCCCTGCCCGAGCTGTCCGACGCAACCACTGAAGTAAATCTCGCGACCGCGTCAatcatgtataataattag
Protein Sequence: MPNPEINKRDHNYSESKPQHANNGNGGAICKISKIRSIVGQIRDINELKKIAPRVRLQDTESLNELTRISSLSNSKLQQNDTSVLDRTRQELRKYCRTCAGLKLPLVDIFSEKGIKLRLSQQIKHLEVNPYDSLSTQMCMDCICDLRMSYKFFMQIKKAEIKLKSIHVNLTTDNATKKVTLIDESSTIKEEMQSSYIETKQEYQLSSTIQQNLSSLSSKQENQTTPGNQADDSVPKICAIFSLKDESKVKSGKEKEDNDEEEEEVRIGGGIFEEVAEGEDEESIEEFDPEDPALLEDEEEEEEEKKSPRSPTTVYKYDMAAKSYVRLERSEEGVSVKSGASQTSEGDGENQREGTSKPNILKRKLIMPTVTTKNGGEDEVQSIVEERKVQKLDTNSLSNVNSPLEEDGIMYVTVKGSKPNEFLLVKVKKVDKPMESKRAVISTDLKPVERLLKRYETLTSKDFSSRRPDGREQIIEEQIEEYKKKREKVLGGQSAAVVTFTVNETQKEVQEEEISSKSNFEKAEEMTLLKEVAGVKEEREQEQEEEEEEEEQEEQEEQQQEEEEEDEENEEDEEDEEEEEEEEKEEGNGDWDGDGDGDGDGDKEEKEFWNKIENIDESQEKVHDNTEEYLSKLSRLKLKWEETKRKKESLQKELDESYSEGNLEKLAKVLGEKEKNLQEFQEYLKQRKIVLTRLKDEDIISLYEDRFSTTLKSSSKLLPDLIDTQPPVDPLSEERYLECDYCSETFSNRDVLEEHLKSHDYRILHCCDDCGEEFQTNKAKRNHNVICVRKLICKYCDIILDSRGKKRQHEQKHVDALYGQLCEICGERFKHQGTLDQHLKTQHTSLEKIYQCPKCPKKFAFKQKLSFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPVGNKRECQVCSKLVPFYSLSKHMHTHKAYSIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMRVHEKTGSRGLKECSCQVCGEKFPNHSTLVIHRNRVHKDGRQYTCHICNRSMISTRSLEWHMSHIHNESMPGIIRDASGLPEKKRVSCYHCNKTFKTELILRTHIKNTHMEKDPLKCTDCVDIFTSEVRLRHHMMVVHNRLEGTLACPHCPKRFVNQLRLKTHMISHSEERPYTCEVCGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCSVCRQRFKYLGDKNKHERRHESLGGSGFKRIVPGRNVKPKVRAADDSSGSEQEPGSLKDSASRQDIRVTEEQYEEQQDGRYDQKFPEEQMVKFEQEQIVKFEGQEEYEQAVYEQEYEETSREASEATEVIMNMEDSTVYTEEVTADNIEPSVEIMTDEIMTSDILQSGTAVMHLQHCNNSSGEIQVIPVMLSLPELSDATTEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01423842;
90% Identity: iTF_01408495; iTF_01405973; iTF_01405965; iTF_01406745; iTF_00765852; iTF_00885347; iTF_01409404;
80% Identity: -