Basic Information

Insect: Leptothorax acervorum
Gene Symbol: -
Assembly: GCA_035220615.1
Location: JASTWQ010000029.1:1315676-1322607[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0004 0.071 15.0 0.1 2 23 713 734 712 734 0.97

2 17 0.89 1.6e+02 4.5 2.8 1 19 740 758 740 759 0.91

3 17 1.1 1.9e+02 4.2 0.5 2 23 767 788 766 788 0.95

4 17 8.4e-05 0.015 17.1 1.4 3 23 797 818 796 818 0.98

5 17 0.0031 0.56 12.2 2.0 1 23 825 848 825 848 0.95

6 17 0.00011 0.02 16.7 0.7 1 23 854 877 854 877 0.94

7 17 7.9 1.4e+03 1.5 1.8 3 23 886 905 885 905 0.83

8 17 1.6e-07 2.9e-05 25.7 2.1 2 23 911 932 910 932 0.97

9 17 2.6e-06 0.00047 21.9 0.2 1 23 938 960 938 960 0.99

10 17 0.00065 0.12 14.3 2.4 2 23 972 994 971 994 0.95

11 17 0.0092 1.6 10.7 2.5 1 23 1000 1023 1000 1023 0.96

12 17 0.033 5.9 8.9 2.8 2 23 1044 1066 1043 1066 0.94

13 17 0.00023 0.042 15.7 0.5 2 23 1073 1095 1072 1095 0.96

14 17 6.7e-05 0.012 17.4 1.0 3 23 1104 1124 1102 1124 0.96

15 17 0.0014 0.25 13.3 2.3 1 23 1130 1153 1130 1153 0.96

16 17 0.38 68 5.6 3.2 2 23 1160 1181 1159 1181 0.96

17 17 0.011 2 10.4 2.6 1 23 1187 1209 1187 1209 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0004	0.071	15.0	0.1	2	23	713	734	712	734	0.97
2	17	0.89	1.6e+02	4.5	2.8	1	19	740	758	740	759	0.91
3	17	1.1	1.9e+02	4.2	0.5	2	23	767	788	766	788	0.95
4	17	8.4e-05	0.015	17.1	1.4	3	23	797	818	796	818	0.98
5	17	0.0031	0.56	12.2	2.0	1	23	825	848	825	848	0.95
6	17	0.00011	0.02	16.7	0.7	1	23	854	877	854	877	0.94
7	17	7.9	1.4e+03	1.5	1.8	3	23	886	905	885	905	0.83
8	17	1.6e-07	2.9e-05	25.7	2.1	2	23	911	932	910	932	0.97
9	17	2.6e-06	0.00047	21.9	0.2	1	23	938	960	938	960	0.99
10	17	0.00065	0.12	14.3	2.4	2	23	972	994	971	994	0.95
11	17	0.0092	1.6	10.7	2.5	1	23	1000	1023	1000	1023	0.96
12	17	0.033	5.9	8.9	2.8	2	23	1044	1066	1043	1066	0.94
13	17	0.00023	0.042	15.7	0.5	2	23	1073	1095	1072	1095	0.96
14	17	6.7e-05	0.012	17.4	1.0	3	23	1104	1124	1102	1124	0.96
15	17	0.0014	0.25	13.3	2.3	1	23	1130	1153	1130	1153	0.96
16	17	0.38	68	5.6	3.2	2	23	1160	1181	1159	1181	0.96
17	17	0.011	2	10.4	2.6	1	23	1187	1209	1187	1209	0.98

Sequence Information

Coding Sequence: atgcCAAATCCTGAAATCAATAAACGTGATCATAATTATAGTGAATCGATACCTCAACATGCCAACAATGGTAACGGTGAGGCTATCAGCAAGGTATCCAAGATAGGATCTGTTGTGGGTCAGATTAGAGACATCAACGAACTGAAAAAGATTACACCGCGCGTCCGTCTACAGGACACTGAAAGCTTGAACGAGTTGACGAGGATCTCTTCTTTAAGTAATACTAAATTACAGCATAACAATACGTCTGTTCTCGAGAGAACCCGGCAAGAACTGAGAAAATACTGTCGCACCTGTGCTGGCCTAAAACTGCCCTTGGTGGACATCTTTAGTGAGAAAGGCATTAAATTGCGATTGAGTCAGCAAATCAAGCATCTCGAAGTGAATCCTTATGATAGTCTCTCCACACAGATGTGCATGGACTGTATTTGCGATCTTAGAATgagttataaatttttcatgCAGATAAAAAAAGCTGAGATAAAACTCAAATCTATCCATGTCAATCTCACGACTGATAATGCCACGAAGAAAGTAACATTGATCGACGAGTCTTCGACAACAAAAGAGGAGGAACAATCATCTTATATAGAAACAAAGCAGGAATATCAATTACCCTCCACAATTCAACAAAACCTATCTTCATTGTCATCGAAGCGAGAAAACCAAACAACTCCCGGAGATCAAGCAAATGACTCTGGTCCGAAAATTTGTGCCATCTTTTCGTTGAAGAACGAATCGAAGGTAAACTCtgggaaggaggaggaggaggaggagaaggaggaagacaatgccgaggaggaggaagaggtaCCGATAGGCGGAGGGATATTTGAGGAAGTGGCAGAGGGAGAGGATGAAGAATCTATCGAAGAATTTGATCCTGAAGACCCCGCACTCCTGGAAGATGAAGAAgaagcagaagaagaagaaaaatctTCAAGATCCCCAGCAATCTACAAGTACGATATGGCAGCAAAGTCTTATGTGAGGTTGGAAAGAAGTGAAGAGGGAGTTTCTGTGAAATCTGGAGCTTTCCAGACTTCAGAAGGTGACGGAGAAAATCAAAAAGAGGGAATGAGGCAGCCAAATATCTTGAAAAGAAAACTAATAATGCCAACGGTATCGACGAAGAATGAGGGGGAGGACGAGGTACAAAGCATAGTCGAGGAGCGCAAAGTGCAAAAGTTAGACACAAACAATCTCTCGAATGTGAATAGTCCTCTAGAAGAGGATGGAATTATGTACGTAACTGTAAAAGGATCCAAACCGAACGAGTTTCTTCTCGTGAAGGTTAAGAAAATGGACAAATCCGCGGAATCAAAGCGCGCGGTAATCTCCGCTGATCTTAAGCCTGTCGAGCGTCTCCTCAAACGTTATGAAACGTTGACATCGAAAGATTTCTCATCTCGACGTCCTGATGCCCGCGAGCAAATAATTGAAGAACAAATCGAAGAGTATAAAAAGAAACGAGAAAAGGTTCTTGGAGGTCAGTCGGTAGTAACGTTCACCGTGAACGAAACGCAAAAAGAAGTACAAGGGGAAGAAATTTCCTCCAAGTCAAATTTTGAAAAGGCAGAAGAAATGACAGTTCTGAAAGAAGTGGCTGGAGAGAAAGGGGAGGAGGAGCAGGAGCAGAAGCTAGAGCGGCAGCAAGAGctcgaggaagaggaggagggtGATGAGGATGAGCATAAGTATGAGCATGACGATGAGGATGGTGATggggagagagaggagaaagtgaAGATAGAGAAGGATGAAAATATTGACGAAAGTGAAGAAAAGGCCAATGATAATACAGAGGAATATCTTTCAAAGTTATCAAGATTGAAACGGAAGTGGGAAGAGACGAAGCGGAAAAAGGAAAGTTTGCAGAAGGAACTGGACGAGTCGTATAATGAAAGGAATTTGGAGAAATTGGCAAAAGTCTTgggagaaaaggaaaagaatctGCAGGAATTCCAAGAGTACTTGAAGCAGCGTAAAATTGTTCTTACTCGCCTCAAGGACGAAGACATAATCTCTCTCTATGAAGATCGATTCTCTACCACTTTAAAATCATCCTCTAAATCGCTCCCAGACCTTATTGACACTCAACCTCCCGTCGACCCTCTTTCCGAAGAGCGCTGTTTAGAATGTGATTATTGTTCCGAAATCTTCTCCAACCGCGATGTTCTCGAGGAACATCTCAAGTCCCACGACTACCGTATCCTTCATTGCTGCGACGACTGTGGAGAAGAATTTCAAACCAATAAAGCGAAAAGAAATCATAATGTAATATGTGTGAGGaaattaatttgcaaatattGCGATATAATTCTGGATTCCAGAGGGAAGAAACGTCAACATGAGCAGAAACACGTTGACGCCCTTTATGGCCAACTTTGCGAGATTTGTGGCGAAAGATTCAAACACCAAGGAACCCTGGACCAGCACCTGAAGACGCAACATACGAGTTTGGAGAAGATTTATCAGTGTCCAAAGTGTCCGAAAAAATTTGCTTTCAAACAAAAACTGAGCTTTCACTTAAAATCTGTTCATACAACTTTGAGAGCGTATCTTTGCGAGGATTGCGGTGCGGATTTTAAGAATCCCGCGAGCTTGAGACATCATAGAATCAGAAAACATCAACCGGTTGGAAATAAGAGGGAATGTCAAGTTTGCAGAAAATTAGTGCCGTTTTACAGTTTGTCGAAGCACATGCACACGCATAAAGCTTACAGTATCCAGTGTCCACATTGTGACAAAATGTTCAAAAACAGCTCGACGTTGAAGCAACATGTGAGAATTCATGAAGATCAAAGGCAGTATCGTTGTGACACTTGCGGCGTTGGATTTAATCGGAGGGATGGTTTGAGGCTGCATATGAGAGTGCACGAAAAAACTGGTAGTAGAGGCTTGAAAGAGTGTTCCTGCCAAGTTTGTGGGGAAAAGTTTCCGAATCATTCGACGTTAGTGATTCATAGGAACAGAGTGCACAAAGATGGGAGACAGTATACATGTCACATTTGTAACAGGTCAATGATTTCGACGAGATCGCTCGAGTGGCACATGTCGCACATTCATAACGAGTCGATGCCAGGTATTACCCGCGACGAGTCTGGTCTGCCTGAAAAAAAACGGGTTTCCTGTTATCATTGCAATAAGACCTTTAAGACGGAATTAATTCTTCGCACACACATAAAAAATACGCACATGGAGAAGGACCCGTTGAAATGTACCGACTGCGACGCTATTTTCACATCTGAAGTGCGTTTACGTCATCACATGATGGTCGTGCACAATCGTCTCGAGGGTACTTTGGCATGCCCTCATTGTCCGAAGCGATTCGTGAACCAATTAAGACTAAAGACTCACATGATCTCTCATTCTGAGGAAAGGCCATATACCTGCGAGATCTGCGGTTTCAACCTGAAGACAAAGATCCAGCTGATCAAGCATCATCAAAACCGACACAGTGACGAGAGACCTTTGCAGTGCAGGTACTGTCCTTGGCGATGCAAGCAAGTGAGCGCTCTCGTTTGTCACGAACGCACGCATACCAACGAACGCCCATATTCGTGCAGCGTGTGCCGGCAACGCTTCAAATATCTCGGTGACAAAAACAAGCATGAACGTCGTCATGAGAGCCTCGGTGGTTCAGGCTTCAAGCGTATCGTACCCGGAAGAAATGTCAAACCGAAAGTGCGCGCCGACGATTCCTCCGGATCCGAGCAGGAGCAGGGTTCGCTCAAGGACTCAGCGAGTCGACAGGACATTCAGGTTACCGAGGAGCAATACGAGGAGCAGCAGGAAGGACAATACGATCAGAAATTTCCGGAGGAACAGATGGTCAAATTCGAACAGAAGCAGATTATCAAGTTTGAGAGTCAAGAGGAGTACGAACAAGCAGTGTACGAGCAGGAGTACGAAGAAACTTCGAGAGAAGCATCGGAAGCTACTGAGGTAATTATGAACATGGAGGATTCCACGGTGTACACTGAGGAGGTTACGGCCGATAATATAGAGCCTGGAGTGGAGATCATGACGGATGAGATGATGACGAATGATATTCTGCAATCTGGCACTGCTGTGATGCATCTGCAACGTTGCAATAATTCCTCGGGGGAGATTGAAGTGATACCACTGATGCTGTCCCTGCCAGAGCTGTCCGACACAACCACTGAAGATAATCTCGCGACCGCATCAATCATGTATAATAATTAG
Protein Sequence: MPNPEINKRDHNYSESIPQHANNGNGEAISKVSKIGSVVGQIRDINELKKITPRVRLQDTESLNELTRISSLSNTKLQHNNTSVLERTRQELRKYCRTCAGLKLPLVDIFSEKGIKLRLSQQIKHLEVNPYDSLSTQMCMDCICDLRMSYKFFMQIKKAEIKLKSIHVNLTTDNATKKVTLIDESSTTKEEEQSSYIETKQEYQLPSTIQQNLSSLSSKRENQTTPGDQANDSGPKICAIFSLKNESKVNSGKEEEEEEKEEDNAEEEEEVPIGGGIFEEVAEGEDEESIEEFDPEDPALLEDEEEAEEEEKSSRSPAIYKYDMAAKSYVRLERSEEGVSVKSGAFQTSEGDGENQKEGMRQPNILKRKLIMPTVSTKNEGEDEVQSIVEERKVQKLDTNNLSNVNSPLEEDGIMYVTVKGSKPNEFLLVKVKKMDKSAESKRAVISADLKPVERLLKRYETLTSKDFSSRRPDAREQIIEEQIEEYKKKREKVLGGQSVVTFTVNETQKEVQGEEISSKSNFEKAEEMTVLKEVAGEKGEEEQEQKLERQQELEEEEEGDEDEHKYEHDDEDGDGEREEKVKIEKDENIDESEEKANDNTEEYLSKLSRLKRKWEETKRKKESLQKELDESYNERNLEKLAKVLGEKEKNLQEFQEYLKQRKIVLTRLKDEDIISLYEDRFSTTLKSSSKSLPDLIDTQPPVDPLSEERCLECDYCSEIFSNRDVLEEHLKSHDYRILHCCDDCGEEFQTNKAKRNHNVICVRKLICKYCDIILDSRGKKRQHEQKHVDALYGQLCEICGERFKHQGTLDQHLKTQHTSLEKIYQCPKCPKKFAFKQKLSFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPVGNKRECQVCRKLVPFYSLSKHMHTHKAYSIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMRVHEKTGSRGLKECSCQVCGEKFPNHSTLVIHRNRVHKDGRQYTCHICNRSMISTRSLEWHMSHIHNESMPGITRDESGLPEKKRVSCYHCNKTFKTELILRTHIKNTHMEKDPLKCTDCDAIFTSEVRLRHHMMVVHNRLEGTLACPHCPKRFVNQLRLKTHMISHSEERPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCSVCRQRFKYLGDKNKHERRHESLGGSGFKRIVPGRNVKPKVRADDSSGSEQEQGSLKDSASRQDIQVTEEQYEEQQEGQYDQKFPEEQMVKFEQKQIIKFESQEEYEQAVYEQEYEETSREASEATEVIMNMEDSTVYTEEVTADNIEPGVEIMTDEMMTNDILQSGTAVMHLQRCNNSSGEIEVIPLMLSLPELSDTTTEDNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01423842;
90% Identity: iTF_01407605;
80% Identity: -