Basic Information

Gene Symbol
hang
Assembly
GCA_943591125.1
Location
CALSBT010000470.1:77081-92638[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.066 7.6 8.4 1.3 3 23 262 283 261 283 0.93
2 17 0.11 12 7.7 2.6 1 23 455 478 455 478 0.91
3 17 0.0024 0.28 12.9 1.7 2 23 588 610 587 610 0.95
4 17 0.017 2 10.2 0.1 1 23 618 641 618 641 0.95
5 17 8.3e-05 0.0096 17.5 0.1 2 23 740 761 739 761 0.97
6 17 3.2e-05 0.0037 18.8 2.5 2 23 839 861 838 861 0.96
7 17 0.0046 0.53 12.0 0.2 2 23 870 892 869 892 0.95
8 17 0.00061 0.071 14.8 0.8 1 23 905 928 905 928 0.97
9 17 0.00051 0.059 15.0 1.0 1 23 963 985 963 985 0.99
10 17 0.0022 0.25 13.0 0.9 1 23 993 1016 993 1016 0.96
11 17 0.0069 0.8 11.5 0.2 2 21 1024 1043 1023 1044 0.92
12 17 0.00012 0.014 17.0 0.3 2 23 1100 1121 1099 1121 0.97
13 17 3.9e-05 0.0045 18.5 0.3 1 23 1156 1178 1156 1178 0.98
14 17 0.0001 0.012 17.2 0.2 2 23 1204 1226 1203 1226 0.93
15 17 0.096 11 7.9 0.3 2 19 1246 1263 1245 1265 0.93
16 17 0.04 4.7 9.1 0.5 3 23 1281 1301 1281 1301 0.97
17 17 0.0009 0.1 14.3 0.2 1 23 1432 1454 1432 1454 0.97

Sequence Information

Coding Sequence
ATGACGGAAGAATCGATACTCCGAGCACGACAGAATTGCTGTCGCTTGTGCTTGGCTCCGGACAGTGAATGTATTTCGATTTTTAACAGCTATGCCGCTGATAAGGAGCCCCTAGCCAACAAAATTCAATCATGTGTCAATATTAAGGTCTCCCCAATTGATAGGCTATCATTGAGAATATGTCACGCTTGTATAAGTTACTTGAATTCGTGGCAGAGTTTCAAAAATCGTTGTGTTGCTTCACAAAACAAGCAACGCAGCTGGTTGGATATTTCGAAGAAATTCGAAAAGAAACAACTTGGTGCTGCGGTTGGTGTTCCACCATCTGCATTGCTGGTAGGTTTAGCTGGAACACATGACGATGGAAGTTCTTTGGGAGTTGGAGGTGACAATGAGCATGAAAATAGTAAACTTGCATCGTCAATTTTGGAGGGCATATCCTCGTTAAAGAAGAGGCGTTCCCTTACGGTTTATCCTATTCCTGTGCATATTAAAGATGAACCGATGGACGAGGAAGAATACGACATGAAACACGAAGAATCGGATATTGATCCGACTCTATTTCTGGACCGTACCGAAGAGGACGCTTCGGACAATTTATCGCAAAAGGAACAACATTTGGCGTCCTTGGGATTGAAGCAATCTGCATCGGGAAATGTTCATCCTTTGAGCTATTTGGCGGACTACAGTTTTGAAGGTGAAAAACCCCAACAACCTGCAGCCGACAAGCCATCTGACAATTCAACAACAACCACACCAACCAGCGAAGTCAAAGAAGCCTCATGTCGTGCCTGCAATTTGAAATTCTCCACCCGAGCAAATGCCCGTCGTCACGAGAGAAATCTTCATCCTCATCTATTCCTCGGTACCCTGCCAAATATCACACCATCCAAAACCGGAATGTCACCGATGACACAAGCTATCGCATCCAGTGGCCAAATGATCCAAACAATATCTCCCATTCTCAAACCCGACCAACTCGGCTACTTTGATTATGATCAACCAGAAAAGTATCAACATCTGCTAACCGATGAAAAAATTCTTTTCATGCAACGCGAAGAAGATTTTCTTCAACAATACCAAAATATGACCTGCAACTGTTGCCTTCGCACTCACGCCACCTACAAGAATTTCATGGCACACATGCGTAAAAAATATCATTCACTACCGCGTAACCTTTGTTTCAAATGTCTGAAACAGAACGACTCGAAGGCGCTCTTCATATCGCATTTGAAGAAACGAAATTGCATAAACCTCTACAAAATCTACCATAGTCTAATTGATGCTGGTGTATTGAAAAAAGATGCCGTCACTGTCTCTCCAGACAAGTTGCGCGCCAAAGAACTTCTCGTGAACAAAATTTACGAATGTAAAATATGCTCCAAGCACTATCGGCTCAAGTTAGAATTTCGAAGTCATGTTTATGAGGAACATGCAGACTATCAGAAGAAGGATGTTTCCCCTGGCCACTGTGGCTTTTGTGGCCTCGAAATTGAAGATCCATTCGAGAGGAAGCGTCATTACAACAACATGGATTGTATTGTAATCCTACGATGCATAACTTGCGATGAACGATTTGACAACCATCAGAAGTTCTTGGATCATGTCTATTCGAAACATTTGGCTAACAACAACGAAACACAGAAAAGCGATCTTATAAAGTCGGAATTGCCTCCGCCTGCAGTTACCTCAACCGAGACTTCGCCTTCGAAAAAACCAGAGCCACCATCGAAGCCGCCATTCTTTTCGCGTCTACCTCAGAGCTGCAATATTTGCGGCCAACACTACAACAATTACAACAATGTCCTTCGTCACATGGAATCAAAACATCCGGATCAGCTGCCACAAACTTACAAATGTACTCGCTGTCTAATCGGCTATCCTCGGTTGATGAATCTGCGTGAGCACATGATCGAAGTGCACGGCATGAAAGTGGATAAAGTGCGTAATAATAGCTTTGATTACATTGTCGATTCGCCGACTGTTCAGGGGAGTGCCCCGCGAGGCACAGAAAAAGGCCCTGTCGATGCGTATACTGGGCGATACGATTATGTAATGAAAGATTTGATGTCAATTACAAATGGTGGCGGTTCAGGGGGTAATGAAGGCGCCACCGCTGAGAATGAAGATGACGATACCAAGTCGGATTCGCCGACTCCGAAGAAAATTAAACTGGAGAGTGGAGCTGTGGTTGCAGTTGGAACTGCAAGCTTGAAAGAATGTCCAGTTTGCAGTGCAGTATTCAATAACAACATTGGATTGTCCAATCATATGCGAACCCATGCTTCGACAGACGATGGTGGTGGAGGGGGTGCTAGTGCTGGCGGCAATACAACTGGAAGCAACTCAGGTGGAGTAGCTGGTGGCAACGCTGGTGCAGGAACAGGCGTTGGAAGCGCTAAAACCGAAACCAAGGTTCATGTAGACGAGGACGATGCAGCTGACAAAAAGTCCATTGACCCACATTTCAGAAGAAGCCTTGAATTGGCTGCAGATCGAAGATTCCGACGTATGCGTTGCCGAATTTGTCAGAAAAGATTTTCGTCCAAGAAGAGCTACCGCCGCCACATGTTGATTGACCATCAAATTCGCAATGTTCAGTTTATCAAATGCAAACTTTGCGATGCCGAATTCGCATACGAAAAGGGTCTCAAAGTTCACATGTTCAAAATCCACAATACATTGCTCAAGGATGAAATGATTGTCAAACAGTACGAGTGTGATATCTGTTCGATTGTCTACCGAACCGAGGAACAACTCTTGCACCACAAGAAATCAATACATGGAAATGAAACAGCCGCTGCTGATGATGACCTACCTATGCCATCGTCATCAACAGTAGAACAATCTAGTATGGTTGAAGGTAGCACCGCTCAAGTCTATTGGTATCAATGTCGCTATTGCCCATCGAACTTTAACACAAACAAAAAATTGGCCATTCATATTAATTCCCATTATGAATTCGATTCGAATGATTATTCTTGCAAGGACTGTGGTAATGTATACAGCGGTCGCAAAAGCCTCTGGGTACATCGCTACAAGAAACATCCTCCGGTGGCTGATCCGTCCGAATGTTCGATTTGCAAAAAAATCTTCTTCGACAAACAGATGTTGGAGAATCACGCACAATCATGTGCTCAGAGGCGTGCAGCAGCAAACGCTGCCGGAACTGGATCACCTTACTTTCAGCATAAAACAGGCGATGACGATGAGATCGGCGACAAGGCTGATACTTCCGCATCCGGGAATGATGTCACCATCAGTGCGGTCAATATGAAAATCAAACTGCCCGAAGTGGTGTGCACAATTTGTTCTCAGAAATTCATCGATCAGGAACTTTTTACCAAACACATTCAAATGCACGAAAGGGAGCTGTACACCGATAATCCATTGGCAGCGATGTTTGACACCGGTCCAGCTGATCCGAATCAATTCTATTTGGATCGTGTTAATGACAACGGGCAGTATGTGTGTGACATATGCTCGAAGGCATTTTCACAGATGACTGCGTTGAAGGTCCATCGAAAGTGGCATTTTCGTGGTGATAGCAAACAGACTCCGGTCGAATCGAACGTTGCCAAAAAGTCCGTCAAACGCAAACGCGAACTCAAATGCGACTATTGTCCGTCAACTTTCATAAGCTCAAACAATCTGCGACGTCACATAGCCGAATTGCATAAATCTGAAATTTCCAATTGGCCCGAACCACCTAAAATCGAACCCGAAAAGTACCTCTATTGCACCAAGTGCGACCTCAAATTTGAAACAAAGAAAGATTGGATCGATCATAAGGTTAACGAAGCCAAAATCGCCAAGCCATTCGGCCCATTCCAATGGGGCTGTGAACTCTGTGGAGTGTATTTGTCGCGTCGCGAAAAGCTCATTCATCACATGTTGGCGCACATAAAAGAAACCAATGGTCAAGCGGTAACAGGATCGTCGGACAACTATCCAGGCGAGAGCAATTCGCAAGATTCAGAATCGTCCGGACATCAAGGAGTTACTGAACAGCCGCCTGCCGATGATGAAGAAGCTGAAGAGGATGAGGAGGTGGAAGAAGAAGAAGAAGAATTTGAGGGAGACGAAGAGGATGCAGAAGAAACGGCAGAAAATGAAAATCACAGCCAAAACACAAATGACGGACAAAACGATGGTTCAAAGTTAAGGGAACGACTTGAGCGAGTATCCAATGATGATAGCAACGATTCAACAACAAGTTCTGACTCCGATGACTCTTCATCAGATGAAGAAGACGGCCACGAACTGTCACGCCCTGAAGAGGGCAAAAAACAATATGCTTGCGATTTATGCCAAGTTGACTTTGAGTCATCGAGTGAACTTCAAAAACATGTTACCAGTCATTTCCTCAACGGACCAGGTTCGGTTACGTTAACCACAATCACAAAAGAGAAACCACCACCAGCTCAAACAGCAGCGAAAGTTGAcgacgacaatgatgaagaagacgaagaggaggacgatgatgatgacgacgataataTGACCGATGCTGAACCTGTAGATTCATAA
Protein Sequence
MTEESILRARQNCCRLCLAPDSECISIFNSYAADKEPLANKIQSCVNIKVSPIDRLSLRICHACISYLNSWQSFKNRCVASQNKQRSWLDISKKFEKKQLGAAVGVPPSALLVGLAGTHDDGSSLGVGGDNEHENSKLASSILEGISSLKKRRSLTVYPIPVHIKDEPMDEEEYDMKHEESDIDPTLFLDRTEEDASDNLSQKEQHLASLGLKQSASGNVHPLSYLADYSFEGEKPQQPAADKPSDNSTTTTPTSEVKEASCRACNLKFSTRANARRHERNLHPHLFLGTLPNITPSKTGMSPMTQAIASSGQMIQTISPILKPDQLGYFDYDQPEKYQHLLTDEKILFMQREEDFLQQYQNMTCNCCLRTHATYKNFMAHMRKKYHSLPRNLCFKCLKQNDSKALFISHLKKRNCINLYKIYHSLIDAGVLKKDAVTVSPDKLRAKELLVNKIYECKICSKHYRLKLEFRSHVYEEHADYQKKDVSPGHCGFCGLEIEDPFERKRHYNNMDCIVILRCITCDERFDNHQKFLDHVYSKHLANNNETQKSDLIKSELPPPAVTSTETSPSKKPEPPSKPPFFSRLPQSCNICGQHYNNYNNVLRHMESKHPDQLPQTYKCTRCLIGYPRLMNLREHMIEVHGMKVDKVRNNSFDYIVDSPTVQGSAPRGTEKGPVDAYTGRYDYVMKDLMSITNGGGSGGNEGATAENEDDDTKSDSPTPKKIKLESGAVVAVGTASLKECPVCSAVFNNNIGLSNHMRTHASTDDGGGGGASAGGNTTGSNSGGVAGGNAGAGTGVGSAKTETKVHVDEDDAADKKSIDPHFRRSLELAADRRFRRMRCRICQKRFSSKKSYRRHMLIDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDEMIVKQYECDICSIVYRTEEQLLHHKKSIHGNETAAADDDLPMPSSSTVEQSSMVEGSTAQVYWYQCRYCPSNFNTNKKLAIHINSHYEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPPVADPSECSICKKIFFDKQMLENHAQSCAQRRAAANAAGTGSPYFQHKTGDDDEIGDKADTSASGNDVTISAVNMKIKLPEVVCTICSQKFIDQELFTKHIQMHERELYTDNPLAAMFDTGPADPNQFYLDRVNDNGQYVCDICSKAFSQMTALKVHRKWHFRGDSKQTPVESNVAKKSVKRKRELKCDYCPSTFISSNNLRRHIAELHKSEISNWPEPPKIEPEKYLYCTKCDLKFETKKDWIDHKVNEAKIAKPFGPFQWGCELCGVYLSRREKLIHHMLAHIKETNGQAVTGSSDNYPGESNSQDSESSGHQGVTEQPPADDEEAEEDEEVEEEEEEFEGDEEDAEETAENENHSQNTNDGQNDGSKLRERLERVSNDDSNDSTTSSDSDDSSSDEEDGHELSRPEEGKKQYACDLCQVDFESSSELQKHVTSHFLNGPGSVTLTTITKEKPPPAQTAAKVDDDNDEEDEEEDDDDDDDNMTDAEPVDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2