Basic Information

Gene Symbol
hang
Assembly
GCA_951509635.1
Location
OX608074.1:95815579-95829053[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.049 9.8 8.4 1.3 3 23 268 289 267 289 0.93
2 18 0.079 16 7.7 2.6 1 23 464 487 464 487 0.91
3 18 10 2e+03 1.1 2.1 3 23 528 549 526 549 0.88
4 18 0.0018 0.36 12.9 1.7 2 23 598 620 597 620 0.95
5 18 0.021 4.2 9.6 0.1 1 23 628 651 628 651 0.95
6 18 3.4e-05 0.0068 18.3 0.1 2 23 748 769 747 769 0.97
7 18 2.4e-05 0.0047 18.8 2.5 2 23 838 860 837 860 0.96
8 18 0.0034 0.67 12.0 0.2 2 23 869 891 868 891 0.95
9 18 0.0012 0.25 13.4 0.2 1 23 904 927 904 927 0.97
10 18 0.00038 0.076 15.0 1.0 1 23 956 978 956 978 0.99
11 18 0.0016 0.32 13.1 0.9 1 23 986 1009 986 1009 0.96
12 18 0.0096 1.9 10.6 0.1 2 21 1017 1036 1016 1037 0.92
13 18 0.00023 0.047 15.7 0.4 3 23 1094 1114 1093 1114 0.98
14 18 7.6e-05 0.015 17.2 0.1 1 23 1149 1171 1149 1171 0.98
15 18 7.6e-05 0.015 17.2 0.2 2 23 1197 1219 1196 1219 0.93
16 18 0.12 25 7.1 0.8 2 19 1239 1256 1238 1258 0.92
17 18 0.0096 1.9 10.6 0.4 3 23 1274 1294 1274 1294 0.98
18 18 0.00066 0.13 14.3 0.2 1 23 1424 1446 1424 1446 0.97

Sequence Information

Coding Sequence
ATGACGGAAGAATCGATACTACGAGCACGTCAGAATTGCTGTCGCTTGTGCTTGGCTCCGGACAGTGaatgtatttcaatttttaacagctaTGCGGCTGATAAGGAGCCCCTAGCCAACAAAATTCAATCATGTGTCAATATTAAGGTATCGCCTATTGATAGATTATCGTTGCGGATATGCCACGCTTGCATCAGTTACTTGAACTCGTGGCAGAGTTTCAAGAATCGTTGTGTGGCGTCACAGAACAAACAACGCAGTTGGTTGGATATATCGAAAAAGTTCGAAAAGAAACAGCTCATAGCCGCGACACCATTATCTAATGCCGCGGCTGCAGCTGCCCTAGCAGGACTATCTCATGATGATGGGAGTGTACCAGGGGGAGGCGGCACAAGTGGAGCAGTTGGAGATgaccaagaaaatttaaaacttgcCTCCTCCATTCTGGAGGGTATTTCATCGCTTAAGAAAAGACGATCCCTCACAGTATATCCAATTCCTGTGCACATCAAAGATGAGCCAATTGATGAAGAAGAATACGATGCTAAGCATGATGAATCCGATATCGATCCAACACTATTTCTCGAACGAAACGAAGAAGAAGGCTCAGATAATTTGTCACAAAAAGAACAACATTTGGCCTCGTTGGGATTGAAACAATCTGCGGGAAATGTCCATCCCTTGAGTTATTTGgctGACTACAATTTTGAAGGCGAAAAATCCCAACAACAATCAGCTGATATTAAACCAGCCGATCTAACATcttcaacaacaccaacaaatgaAGTCAAAGAAGCATCATGTCGTGCTTGCAATTTGAAATTCTCCACTAGAGCGAATGCTCGACGTCACGAACGCAATCTTCATCCTCACCTGTTTTTGGGTGCTTTGTCGCAAAGCAGCATAGCCACAAAAGCACTCAGTTTAATTTCACCAATGACACAAGCTATTGCGGCCAGCGTTCCAATGGTTCAAACAATACAACCTGCTATTAAATCCGAACAGCTTGGTCTCTTTGACTATGACCAGCCGGAAAAATACCAGCACCTCCTGAGCGATGATAAGATATTGTTCATGCAGCGGCAGGAGGATTTCCTGCAGCAATATCAAAACATGACCTGCAACTGCTGCCTTCGCACTCATGCCACTTACAAGAACTTCATGGCACACATGCGTAAAAAATATCATTCGCTGCCGCGTAATTTGTGCTTCAAGTGTCTTAAGCAAAACGACTCGAAGGCGCTTTTTATATCGCATTTGAAGAAACGGAACTGCATTAACCTGTACAGGGTCTACCATAGCTTGATTGATGCCGGCGTGTTGAAAAAAGACGCATCTAGCTGTTCGCCGGACAAGCTACGAGCCAAAGAACTTCTTGTAAATAAAATCTACGAGTGCAAAATATGCTCCAAACACTATCGTTTGAAGCTGGAATTCCGCAGCCACGTTTATGAGGAACATGCAGACTACCAAAAGAAGGACGTTTCACCGGGTCATTGCGGATTTTGTGGGTTGGAAATCGAAGATCCGTTCGAAAGGAAGCGGCACTATAACAACATGGATTGTATTGTCATCCTTCGGTGCATCACATGCGATGAGAAGTTCGATAACCATCAGAAATTCTTGGACCATGTTTACTCGAAACATCTGGCTAACAACAACGAAGCTCTAAAGAGCAATCTTATGAAGGAACTTCTGCCACCTCCTCCCGCTATTACCTCAACCGAGAGCTCGCCTTCAAAGAAATCCGACATCCCTGCAAAGCCGCAATTCTTTTCACGACTACCTCAGAGCTGCAATATTTGTGGCCAGcattacaacaactacaacaacgtCTTACGTCATATGGAATCGAAGCACCCCGATCAACTACCCCAAACGTACAAATGTACCCGTTGTTTGGTTGGCTACCCACGGCTCATGAATCTACGGGAGCACATGATCGAGGTGCACGGCATGAAGGTGGACAAAGTGCGTAACAACAGTTTTGATTATATCGTGGACTCGCCAACGGTGCAGGGAAGCATTCCGCGAGGAGCCGAAAAGGGCGTTGTCGATGCCTACACTGGACGTTATGATTATGTCATGAAAGACCTCATGTCCATAACCAACGGTGGGTCAGGCGGAAATGAGGGCCTGGCCGACAACGAAGACGACGATAATAAGTCTGACTCACCGACCCCTAAAAAAATCAAGCTTGAAACCGGAGCCGTTGTGGCGGTGGGTACTGCAAGTCTAAAGGAATGTCCCATTTGCAGTGCAGTTTTCAATAATAACATTGGCCTGTCTAATCATATGCGAACCCATTCAACAGAAGATGGGGGCGCAGTTGGTGGTGGAAGTGCTGCTGGTGTAAGTACAGCTGGGGGTGTAAGTATAAGTGTTGTTGGAGGTGCAGGTGTAGAAGATGACCTccacgacgatgatgacgatgcaGCGGACAAGAAGCCAATAGATCCGCTTTTCAAAAGAAGCCTGGAGTTGGCGGCGGATAGAAGATTCCGACGAATGCGATGCCGCATTTGCCAAAAACGGTTCTCCTCCAAGAAGAGCTATCGCCGCCACATGTTGATAGACCATCAAATTCGCAACGTCCAGTTCATTAAATGCAAACTGTGCGATGCCGAATTCGCTTACGAAAAGGGTCTTAAGGTTCACATGTTCAAAATCCACAACACATTGCTCAAGGACGAAATGATTGTAAAGCAGTTCGAGTGCGACATCTGTTCTATTGTATACCGAACGGAGGAGCAGCTGTTGCTCCACAAGAAGTCAGTGCACGGCAATGAGAGTGCAGCTGCCGAAGATGACTTGCCGCCCTCAGTGGATCAGAGTATGGAAGCCTCCATTGCTCCAGTATACTGGTATCAATGCCGCTATTGCCCCTCCAACTTtaacaccaacaaaaaattgGCCATTCACATTAATTCGCACTACGAGTTCGATTCGAACGACTACTCCTGTAAGGATTGTGGAAATGTTTACAGCGGCCGCAAGAGCCTCTGGGTACATCGCTACAAGAAGCATCCACCGGTGGCCGATCCCTCAGAGTGTGGCATTTGTAAGAAAATCTTCTTCGACAAACAAATGTTGGAGAACCACGCACAATCTTGTGCCCAGAAACGTGCAGCAGCAAATGCTGCCGAATCTGTATCTACATATTTTCAACACAAAACAGGTGATGACGATGAAGTAAGTGACAAACCAGACACCATCAGTGCTATCGCAGAGAAGTCAACTGCTCCGGTGAATATGAAAATTAAACTGCCCGAAGTTGCGTGTACAATTTGTGCCCAGAAATTCACCGATCAAGAACTCTTTACCAAACACATTCAAATGCACGAGATGGAGCTGTATACGGATAATCCGTTGGCGGCAATGTTTGACACTGGTCCAGCTGATCCCAATCAATTCTATTTGGATCGGGTGAATGACAATGGACAGTATGTTTGTGACATATGTTCAAAGGCGTTTGCCCAAATGACAGCGCTGAAGGTTCATCGAAAATGGCATTTTCGAGGTGATAGCAAACAGACTGCAGTCGATTCAAACGCACCCAAAAAGACAGTGAAACGTAAGCGTGAACTTAAATGCGACTATTGTCCGTCAACTTTCATTAGCTCAAACAATCTGCGACGTCACATAGCCGAGCTACATAAATCAGAAATTTCCAATTGGCCTGAACCACCTAAAATCGAACCTGAAAAGTACCTTCATTGCACCAAGTGTGACCTGAAATTTGAAACAAAGAAAGACTGGATCGACCATAAAGTGAATGAAGCAAAAATTGCCAAACCTTTTGGTCCCTTCCAGTGGGGATGCGAAATCTGCGGGGTGTATTTGTCGCGGCGTGAAAAACTCATACATCACATGTTGGCCCATATCAAAGAAGTAAACGGCCAAGTGAATTCAGAGGCTGATAACTATCCGGGTGAGAGTAATTCGCAAGACTCGGAGACATCTAGTCATCATAGGGTGCCCGAACATCCGCCACCAGATGCAGATGACGATGAAGCCGAGGAGGAGGAAGAAGAGGAGGAGTTTGAGAATGACGATGATGAAGCTGAAGCAGAAGAAACTGTGGAAGCTGAAAATCACGACCAAAATGCCAACGACGGGCAAAATGAAAGCTCAAAGCTGAGGCAACGATTGCAGCGTGATTCAAATGATGAAAGCAACGATTCCACAACAAGCTCTGACTCCGATGGTTCTTCTTCGGATGAAGAAGATGCCGAAGGTACATCACGCCACGAAGAGACAAAAAAACGATATGCCTGCGATTTATGTCAAGTTGATTTCGAATCCTCTAGCGAACTTCAGAAACATGTCACTAGTCATTTCCTCAATGGTCCAGGTTCAGTCACATTAACCACAATTACAAAGGAAAAGTCAATACCAGCTCAGATACATCATGCGAAAGTTGACGACGACAATGACAATGATAACGAcgaagaagatgaagatgacgacgatgatgacgatgacaatTTAACCGATGCAGATCCTGTAGATTCATAA
Protein Sequence
MTEESILRARQNCCRLCLAPDSECISIFNSYAADKEPLANKIQSCVNIKVSPIDRLSLRICHACISYLNSWQSFKNRCVASQNKQRSWLDISKKFEKKQLIAATPLSNAAAAAALAGLSHDDGSVPGGGGTSGAVGDDQENLKLASSILEGISSLKKRRSLTVYPIPVHIKDEPIDEEEYDAKHDESDIDPTLFLERNEEEGSDNLSQKEQHLASLGLKQSAGNVHPLSYLADYNFEGEKSQQQSADIKPADLTSSTTPTNEVKEASCRACNLKFSTRANARRHERNLHPHLFLGALSQSSIATKALSLISPMTQAIAASVPMVQTIQPAIKSEQLGLFDYDQPEKYQHLLSDDKILFMQRQEDFLQQYQNMTCNCCLRTHATYKNFMAHMRKKYHSLPRNLCFKCLKQNDSKALFISHLKKRNCINLYRVYHSLIDAGVLKKDASSCSPDKLRAKELLVNKIYECKICSKHYRLKLEFRSHVYEEHADYQKKDVSPGHCGFCGLEIEDPFERKRHYNNMDCIVILRCITCDEKFDNHQKFLDHVYSKHLANNNEALKSNLMKELLPPPPAITSTESSPSKKSDIPAKPQFFSRLPQSCNICGQHYNNYNNVLRHMESKHPDQLPQTYKCTRCLVGYPRLMNLREHMIEVHGMKVDKVRNNSFDYIVDSPTVQGSIPRGAEKGVVDAYTGRYDYVMKDLMSITNGGSGGNEGLADNEDDDNKSDSPTPKKIKLETGAVVAVGTASLKECPICSAVFNNNIGLSNHMRTHSTEDGGAVGGGSAAGVSTAGGVSISVVGGAGVEDDLHDDDDDAADKKPIDPLFKRSLELAADRRFRRMRCRICQKRFSSKKSYRRHMLIDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDEMIVKQFECDICSIVYRTEEQLLLHKKSVHGNESAAAEDDLPPSVDQSMEASIAPVYWYQCRYCPSNFNTNKKLAIHINSHYEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPPVADPSECGICKKIFFDKQMLENHAQSCAQKRAAANAAESVSTYFQHKTGDDDEVSDKPDTISAIAEKSTAPVNMKIKLPEVACTICAQKFTDQELFTKHIQMHEMELYTDNPLAAMFDTGPADPNQFYLDRVNDNGQYVCDICSKAFAQMTALKVHRKWHFRGDSKQTAVDSNAPKKTVKRKRELKCDYCPSTFISSNNLRRHIAELHKSEISNWPEPPKIEPEKYLHCTKCDLKFETKKDWIDHKVNEAKIAKPFGPFQWGCEICGVYLSRREKLIHHMLAHIKEVNGQVNSEADNYPGESNSQDSETSSHHRVPEHPPPDADDDEAEEEEEEEEFENDDDEAEAEETVEAENHDQNANDGQNESSKLRQRLQRDSNDESNDSTTSSDSDGSSSDEEDAEGTSRHEETKKRYACDLCQVDFESSSELQKHVTSHFLNGPGSVTLTTITKEKSIPAQIHHAKVDDDNDNDNDEEDEDDDDDDDDNLTDADPVDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01357261;
90% Identity
iTF_00894192;
80% Identity
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