Basic Information

Gene Symbol
hang
Assembly
GCA_963921185.1
Location
OY992532.1:63355705-63369174[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.031 8.4 9.1 1.8 3 23 270 291 269 291 0.94
2 17 0.083 23 7.7 2.6 1 23 462 485 462 485 0.91
3 17 0.0019 0.52 12.9 1.7 2 23 596 618 595 618 0.95
4 17 0.017 4.8 9.9 0.1 1 23 626 649 626 649 0.94
5 17 3.6e-05 0.0098 18.3 0.1 2 23 746 767 745 767 0.97
6 17 2.5e-05 0.0068 18.8 2.5 2 23 836 858 835 858 0.96
7 17 0.0035 0.97 12.1 0.2 2 23 867 889 866 889 0.95
8 17 0.00098 0.27 13.8 0.2 1 23 902 925 902 925 0.97
9 17 0.0004 0.11 15.0 1.0 1 23 954 976 954 976 0.99
10 17 0.0017 0.47 13.1 0.9 1 23 984 1007 984 1007 0.96
11 17 0.0054 1.5 11.5 0.2 2 21 1015 1034 1014 1035 0.92
12 17 0.00024 0.067 15.7 0.4 3 23 1092 1112 1091 1112 0.98
13 17 8e-05 0.022 17.2 0.1 1 23 1147 1169 1147 1169 0.98
14 17 7.9e-05 0.022 17.2 0.2 2 23 1195 1217 1194 1217 0.93
15 17 0.13 36 7.1 0.8 2 19 1237 1254 1236 1256 0.92
16 17 0.01 2.8 10.6 0.4 3 23 1272 1292 1272 1292 0.98
17 17 0.0024 0.66 12.6 0.1 1 23 1418 1440 1418 1440 0.97

Sequence Information

Coding Sequence
ATGACGGAAGAATCGATACTACGAGCACGTCAGAACTGCTGTCGCTTGTGCTTGGCTCCGGACAGTGAATGTATTTCGATTTTTAACAGCTATGCGGCTGATAAGGAGCCCCTAGCCAACAAAATTCAATCATGTGTCAATATTAAGGTATCACCAATCGATAGGTTATCCTTGCGGATATGTCACGCTTGTATAAGTTACTTGAACTCATGGCAGAGTTTTAAAAATCGCTGTGTGGCTTCGCAAAACAAACAACGCAGCTGGCTGGATATATCGAAGAAGTATGAAAAGAAACAGCTAAGTGCCGCAGCTCCACTATCTAATGCTGCTGCTGGACTAGCAGGGCTAAGTGCGTGCCATGAAGATGGAAGTGCATCAGGCGGAGGAGGAGGAGGAGGTGGCCCCGGAGGGGTGGGTGATGAGCAGGACAATATTAAACTTGCCTCCTCGATTCTGGAGGGTATTTCATCGCTAAAGAAAAGACGTTCCCTCACTGTTTATccAATTCCTGTGCACATTAAAGATGAGCCACTTGATGAAGAAGATTACGATATAAAACACGAAGAATCAGATATCGATCCGACATTATTTCTGGAACGCACCGAAGAAGAAGGCTCAGATAACTTGTCACAAAAGGAACAACATTTGGCCTCTTTGGGATTGAAACAATCAGCAGGAACTGTTCATCCCTTGAGTTATTTGgCTGATTATAGTTTTGAAGGCGAAAAGCCCCAACAACCACCAGCTGATAAACCGGCTGAGATTACAGCTACAACAACACCATCTACTGAAGTTAAAGAAGCGTCATGTCGTTCTtgcaatttgaaattttctaccCGAGCAAATGCTCGACGTCACGAGAGAAATCTTCACCCACATCTATTCTTAGGTGCTTTGCCAAGCAGCATACCAACAAAAGCACTCAATCTAATTTCACCAATGACACAAGCTATTGCGGCCAGTGTCCCAATGGCTCAAACAATACAACCTGCTTTAAAACCAGAACAACTTGGGCTCTTTGAATATGACCAGCCAGAAAAGTATCAACATCTCCTTAGCGATGATAAGATACTATTCATGCAGCGCCAAGAAGATTTCCTGCAGCAATACCAAAACATGACTTGCAACTGCTGCCTTCGCACTCATGCcacttataaaaattttatggcACACATGcgtaaaaaatatcattcattgCCACGTAACCTATGCTTCAAGTGCCTGAAGCAAAATGATTCCAAGGCTCTTTTTATATCACATTTGAAAAAACGAAACTGCATTAACCTATACAAGATCTACCACAGCTTGATTGATGCGGGCGTGTTGAAAAAAGACGCATCTTCGGACAAGCTAAGAGCCAAAGAACTACTTGTGAATAAAATCTACGAGTGCAAAATATGCTCGAAACATTACCGTTTAAAGCTAGAATTTCGCAGTCACGTTTATGAGGAACATGCAGACTATCAAAAGAAAGACGTTTCACCGGGACATTGCGGATTTTGTGGCTTAGAAATTGAAGATCCGTTTGAAAGAAAGCGGCACTACAACAACATGGATTGCATTGTTATCCTACGATGCATCACATGCGATGAGAAGTTTGATAATCATCAGAAATTCTTGGATCACGTTTATTCGAAGCATTTGGCTAACAACAACGAAACCCAAAAAAGTAATCTTATGAAGGAACTTCCCCCGCCTCCTCCCACTACTACCTCAACCGAGAGTTCACCTTCGAAGAAATCGGAGGCTCCTGCAAAGCCGCAATTCTTTTCACGACTACCTCAGAGCTGCAATATTTGCGGTCAACATTACAACAACTACAACAATGTCTTACGTCACATGGAATCAAAGCACCCGGATCAATTGCCACAGACATACAAATGCACTCGCTGTTTGATTGGCTATCCGCGGCTCATGAATCTTCGCGAGCACATGATCGATGTACACGGCATGAAGGTCGATAAAGTGCGTAACAATAGCTTTGATTACATTGTGGACTCGCCAACAGTGCAGGGAAGTATACCGCGAGGAGCCGAGAAAGGGGCCGTTGATTCTTATACGGGCCGTTATGATTATGTAATGAAAGACCTGATGTCCATAACTAATGGTGGCTCAGGAGGGAATGAGGGCCCGGGTGAAAACGACGACGATGATAATAAATCTGATTCACCGActccgaaaaaaattaagcTCGAAAGCGGTGCAGTTGTGGCCGTTGGCACTGCAAGTTTAAAGGAATGTCCTATTTGCAGTGCAGTTTTTAATAACAACATTGGACTGTCCAACCACATGCGAACTCACACTGCGGAAGATATTGGTGGAgtgggtggtggtggtggtggcggtAGTGTAGGCGGTGTTGGTGTTAGTACAGGTGCTGCAGTTGGTGGAGCTGTTGAAGATGATGTTCACGACGAAGATGACGATGCAGCGGACAAGAAGCCCATCGATCCACTTTTCAAAAGAAGCCTAGAGTTAGCTGCAGATCGAAGGTTCCGAAGAATGCGTTGCCGCATTTGCCAGAAACGATTCTCTTCAAAGAAGAGCTATCGCCGCCACATGTTGATTGACCATCAAATTCGCAATGTTCAGTTCATTAAATGCAAACTTTGCGATGCCGAATTCGCTTATGAAAAGGGCCTGAAAGTACACATGTTCAAAATACACAACACATTGCTCAAAGACGAAATGATTGTTAAGCAGTACGAATGCGATATCTGTTCCATTGTATATCGGACGGAGGAGCAGCTCTTGCTTCACAAAAAGTCAGTACATGGAAATGAAAGTGCAGCGGCTGAAGATAACTTGCCGCCCTCAGTAGATCAAAGTATGGAAGCACCCACTGCCCCAGTGTTGTGGTATCAATGCCGATATTGCCCTTCGAACTTtaataccaacaaaaaacttgcCATTCATATAAATTCCCACTATGAATTCGATTCGAATGACTACTCCTGTAAGGATTGTGGAAACGTATATAGCGGCCGCAAAAGTCTTTGGGTACATCGCTACAAAAAACATCCTCCAGTCGCCGATCCCTCAGAGTGTTCGATTTGCAAGAAAATCTTCTTCGACAAACAAATGCTTGAGAATCACGCACAATCTTGTGCAAAGAAGCGCGTGGCAACAAGTGCTGCTGAAGCCGTTTCTACATACTTTCAACATAAAACAGGTGATGACGATGAAGTCAGTGACAAGCCTGATACAGTTGGTAATGACGGGGAGAAATCAACCGCTGCggtcaatttgaaaattaagctTCCTGAAGTAGCATGTACCATCTGTGCCCAGAAATTCACCGATCAAGAACTCTTCACCAAACACATCCAAATGCATGAGATGGAGTTGTATACCGATAATCCTTTGGCAGCAATGTTTGACACTGGTCCAGCTGATCCAAATCAATTCTATCTAGATCGAGTCAATGACAACGGGCAATATGTGTGTGACATATGCTCCAAGGCGTTCGCTCAAATGACAGCGCTGAAGGTTCATCGCAAATGGCATTTTCGAGGTGATAGCAAACAGACTCCACTCGATTCAAACGCACCCAAAAAGACGGTGAAACGCAAGCGTGAACTTAAATGCGACTATTGTCCGTCAACTTTCATTAGCTCAAACAATCTGCGGCGTCACATAGCCGAACTGCATAAGTCAGAAATTTCCAATTGGCCTGAACCACCTAAAATCGAACCTGAAAGGTACCTTCATTGCACCAAGTGCGACCTGAAATTTGAAACGAAAAAAGACTGGATCGACCATAAAGTTAATGAAGCGAAAATTGCCAAACCTTTTGGACCGTTCCAGTGGGGTTGCGAAATCTGCGGGGTGTATTTGTCGCGGCGCGAAAAGCTCATACATCATATGCTGGCCCATATCAAAGAAATAAATGGCCAAGTGAATTCAGAGGTTGATAACTATCCGGGTGAGAGTAATTCACAGGACTCGGAGTCGTCTAGTCATCATGGGGCACCAGAACAACGACCAGCTGATGACGAAGAACCCGAAGAGGAAGACGAAGAAGAGGAAGAAGAGGGTGATGAAGATGAAGCAGAAGAAACTGTAGAAACTGAAAATCACGACCAAAATGCAAACGACGGACAAAATGAAAGCTCAAAGTTGAGGCAGCGGTTGCAGCGTGAGTCCAATGATGACAGTAACGATTCAACCACAAGCTCTGACTCAGATGGTTCTTCTTCGGATGAGGAAGATGCTGATGGTATATCACCCCATGAAGAGATCAAAAAACGATACGCCTGCGATTTATGTCAAGTTGACTTCGAGTCCTCTGGCGAACTTCAGAAACATGTCACTAGTCATTTCCTCAATGGGCCAGGTTCAGTGACACTAACCACAATCAAAAAGGAGAAATCAATACCAGCTCAAATACATGTGAAAGTTGAAGACGACAATGATGTAGAAGATGAagatgacgacgacgatgacgaagATAATTTGACCGATGCAGAACCTGTAGAttcataa
Protein Sequence
MTEESILRARQNCCRLCLAPDSECISIFNSYAADKEPLANKIQSCVNIKVSPIDRLSLRICHACISYLNSWQSFKNRCVASQNKQRSWLDISKKYEKKQLSAAAPLSNAAAGLAGLSACHEDGSASGGGGGGGGPGGVGDEQDNIKLASSILEGISSLKKRRSLTVYPIPVHIKDEPLDEEDYDIKHEESDIDPTLFLERTEEEGSDNLSQKEQHLASLGLKQSAGTVHPLSYLADYSFEGEKPQQPPADKPAEITATTTPSTEVKEASCRSCNLKFSTRANARRHERNLHPHLFLGALPSSIPTKALNLISPMTQAIAASVPMAQTIQPALKPEQLGLFEYDQPEKYQHLLSDDKILFMQRQEDFLQQYQNMTCNCCLRTHATYKNFMAHMRKKYHSLPRNLCFKCLKQNDSKALFISHLKKRNCINLYKIYHSLIDAGVLKKDASSDKLRAKELLVNKIYECKICSKHYRLKLEFRSHVYEEHADYQKKDVSPGHCGFCGLEIEDPFERKRHYNNMDCIVILRCITCDEKFDNHQKFLDHVYSKHLANNNETQKSNLMKELPPPPPTTTSTESSPSKKSEAPAKPQFFSRLPQSCNICGQHYNNYNNVLRHMESKHPDQLPQTYKCTRCLIGYPRLMNLREHMIDVHGMKVDKVRNNSFDYIVDSPTVQGSIPRGAEKGAVDSYTGRYDYVMKDLMSITNGGSGGNEGPGENDDDDNKSDSPTPKKIKLESGAVVAVGTASLKECPICSAVFNNNIGLSNHMRTHTAEDIGGVGGGGGGGSVGGVGVSTGAAVGGAVEDDVHDEDDDAADKKPIDPLFKRSLELAADRRFRRMRCRICQKRFSSKKSYRRHMLIDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDEMIVKQYECDICSIVYRTEEQLLLHKKSVHGNESAAAEDNLPPSVDQSMEAPTAPVLWYQCRYCPSNFNTNKKLAIHINSHYEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPPVADPSECSICKKIFFDKQMLENHAQSCAKKRVATSAAEAVSTYFQHKTGDDDEVSDKPDTVGNDGEKSTAAVNLKIKLPEVACTICAQKFTDQELFTKHIQMHEMELYTDNPLAAMFDTGPADPNQFYLDRVNDNGQYVCDICSKAFAQMTALKVHRKWHFRGDSKQTPLDSNAPKKTVKRKRELKCDYCPSTFISSNNLRRHIAELHKSEISNWPEPPKIEPERYLHCTKCDLKFETKKDWIDHKVNEAKIAKPFGPFQWGCEICGVYLSRREKLIHHMLAHIKEINGQVNSEVDNYPGESNSQDSESSSHHGAPEQRPADDEEPEEEDEEEEEEGDEDEAEETVETENHDQNANDGQNESSKLRQRLQRESNDDSNDSTTSSDSDGSSSDEEDADGISPHEEIKKRYACDLCQVDFESSGELQKHVTSHFLNGPGSVTLTTIKKEKSIPAQIHVKVEDDNDVEDEDDDDDDEDNLTDAEPVDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01357261;
90% Identity
iTF_00894192;
80% Identity
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