Basic Information

Gene Symbol
hang
Assembly
GCA_905146935.1
Location
LR989929.1:24982519-24995420[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.045 5.8 8.4 1.3 3 23 272 293 271 293 0.93
2 17 0.072 9.4 7.7 2.6 1 23 467 490 467 490 0.91
3 17 0.0017 0.21 12.9 1.7 2 23 601 623 600 623 0.95
4 17 0.012 1.5 10.2 0.1 1 23 631 654 631 654 0.95
5 17 3.1e-05 0.004 18.3 0.1 2 23 751 772 750 772 0.97
6 17 2.2e-05 0.0028 18.8 2.5 2 23 842 864 841 864 0.96
7 17 0.0031 0.4 12.0 0.2 2 23 873 895 872 895 0.95
8 17 0.00086 0.11 13.8 0.2 1 23 908 931 908 931 0.97
9 17 0.00035 0.045 15.0 1.0 1 23 960 982 960 982 0.99
10 17 0.0015 0.19 13.1 0.9 1 23 990 1013 990 1013 0.96
11 17 0.0078 1 10.8 0.2 2 21 1021 1040 1020 1041 0.93
12 17 0.00048 0.062 14.6 0.2 3 23 1098 1118 1097 1118 0.98
13 17 7.3e-05 0.0094 17.2 0.2 1 23 1153 1175 1153 1175 0.98
14 17 6.9e-05 0.009 17.2 0.2 2 23 1201 1223 1200 1223 0.93
15 17 0.026 3.4 9.1 0.2 2 19 1243 1260 1242 1263 0.92
16 17 0.0088 1.1 10.6 0.4 3 23 1278 1298 1278 1298 0.98
17 17 0.00061 0.079 14.3 0.2 1 23 1426 1448 1426 1448 0.97

Sequence Information

Coding Sequence
ATGACGGAAGAATCGATACTAAGAGCACGTCAGAATTGCTGTCGCTTGTGCTTGGCTCCGGACAGTGAATGTATTTCAATTTTTAACAGCTATGCGGCTGATAAGGAGCCCCTAGCCAACAAAATTCAATCATGTGTCAATATTAAGGTTTCGCCAATCGACAGACTTTCCTTACGGATATGCCACGCTTGTATCAGTTATTTGAACTCGTGGCAGAGTTTCAAAAATCGTTGTGTGGCTTCGCAGAACAAACAACGCAGCTGGTTGGATATATCGAAAAAGTTCGAAAAGAAACAGCTTATAGCGGCGGCACCATTATCTAATGCCGCTGCTGCTGCTGCACTAGCAGGACTATCGCATGACGATGGTAATGCGTCAGGCGGAGGGGCAGCCGGAGGCGGTATCCCTGGAGCAGTTGGTGATGAGCAAGAAAATATTAAACTTGCCTCCTCGATTCTGGAGGGTATTTCATCGCTCAAGAAAAGACGATCCCTCACAGTTTATCCAATTCCGGTTCACATTAAAGATGAGCCAATTGATGAAGAAGAATACGATGCGAAACACGATGAATCGGACATCGATCCCACACTATTTCTGGAACGCACCGAAGAAGAAGGCTCAGATAATTTGTCACAAAAAGAACAACACTTGGCCTCGTTGGGATTAAAACAATCAGCGGGAAATGTCCATCCCTTAAGTTATTTGGCTGACTACAGTTTTGAAGGTGAAAAGTCTCAACAAACATCTGCTGATATCAAACCAGCAGATATATCAGCTTCAACAACACCAACTAATGAAGTAAAGGAAGCATCTTGTCGTGCTTGCAATTTAAAATTTTCTACCAGAGCAAATGCTCGACGCCACGAGCGAAATCTTCATCCTCACCTGTTCTTAGGTGGTTTGTCAAGCAACATACCCACAAAAGCACTCAATATACTATCGCCGATGACTCAAGCAATTGCAGCCAGCGTTCCAATGATTCAACCAGCACCACCGGCTATTAAATCAGAACATTTCGGTCACTTCGATTATGACCAACCGGAAAAGTATCAACATCTGCTAAGCGATGATAAGATATTATTTATGCAGCGTCAAGAAGACTTCCTGCAGCAATATCAAAACATGACCTGCAATTGTTGTCTTCGCACTCATGCCACTTATAAGAACTTTATGGCACACATGCGTAAGAAATATCATTCGTTGCCGCGTAATTTATGTTTCAAGTGTCTTAAGCAAAATGACTCAAAGGCGCTTTTTATATCGCATTTGAAGAAACGGAACTGCATTAATCTATATAGAGTCTACCATAGCTTGATTGATGCTGGCGTGTTGAAAAAAGACGCATCTAGCTGTTCTCCAGACAAGCTACGAGCCAAAGAACTTCTTGTAAATAAAATCTACGAGTGCAAAATATGCTCCAAGCATTACCGTTTGAAGTTAGAATTTCGTAGTCACGTTTATGAAGAACACGCAGACTACCAGAAGAAAGACGTTTCACCGGGTCATTGCGGATTTTGTGGCCTCGAAATTGAAGATCCTTTCGAAAGAAAGCGACACTATAACAACATGGATTGCATTGTTATTCTGCGGTGCATCACATGCGAGGAGAAGTTTGATAATCATCAAAAATTCTTGGACCACGTTTATTCGAAACATTTGGCTAACAACAACGAAACTCAAAAAAGTAATCTTATGAAGGAACTACTTCCACCTCCTCCCGCTACTACCTCAAACGAAAGCTCGCCTTCGAAGAAAACCGAGATCCCTGCAAAACCGCAATTCTTTTCACGACTACCTCAGAGCTGCAATATTTGCGGCCAACACTACAACAACTACAACAATGTCTTACGTCATATGGAATCAAAACACCCAGATCAATTACCACAAACATATAAATGTACTCGTTGCTTGATTGGCTATCCACGGCTCATGAATCTTCGTGAGCACATGATCGAGGTACACGGCATGAAAGTCGATAAAGTGCGTAACAACAGTTTTGATTACATTGTGGACTCGCCAACAGTGCAGGGAAGTATGCCGCGAGGAGCCGAAAAAGGGACTGTTGATGCATATACCGGCCGTTATGATTATGTAATGAAAGACCTCATGTCCATAACGAACGGAGGTTCAGGCGGAAATGAGGGTCTCGTCGACAACGAAGACGATGATTCTAAGTCAGACTCACCGACTCCCAAAAAAATAAAGCTCGACAGTAGTGCAGTTATGGCGGCTGGTACTTCAAATTTAAAGGAATGTCCTATTTGCAGTGCAGTTTTCAACAACAACATTGGTCTGTCCAATCATATGCGAACCCACTCTACAGAAGATGGCGGGGCAGTTGGTAGTGGCAGTGGTAGTGGTACTGCTGCTGCTGTTAGTACAGGAGGTGTGAGTGTAGTGGGTGGTGCAGGTCATGAAGAAGATCTTCATGATGAAGATGACGATGCAATGGATAAAAAACCCATTGACCCACTTTTCAAGAGAAGTCTGGAGTTGGCTGCAGATCGACGATTCCGACGAATGCGTTGTCGCATTTGCCAGAAACGGTTCTCATCCAAAAAGAGTTATCGTCGCCACATGTTGATCGACCATCAAATTCGCAATGTACAGTTCATAAAATGCAAACTTTGCGATGCCGAATTTGCGTATGAGAAGGGCCTTAAGGTACACATGTTTAAAATCCATAATACATTGCTCAAGGATGAAATGATTGTCAAGCAGTACGAATGCGATATCTGTTCGATTGTATACCGAACGGAGGAGCAGCTTTTGCTCCACAAGAAATCAGTGCACGGTAATGAAAGTGCAGCTGCTGAAGATGACCTACCGCCCTCTGTTGATCAAAGTATGGAAGCTTCAATTGCTCCAGTATACTGGTATCAATGCCGTTATTGCCCCTCCAATTTTAACACAAACAAAAAATTGGCCATTCATATTAATTCCCACTATGAATTCGATTCAAATGACTACTCCTGCAAGGATTGTGGTAACGTTTACAGCGGCCGTAAAAGTCTTTGGGTACATCGATATAAGAAACATCCTCCGGTTGCCGATCCGTCAGAGTGTGCAATTTGTAAGAAAATATTCTTTGACAAACAAATGTTGGAGAACCACACACAATCTTGTGCACAGAAACGTGCGGCAGCCAATGCTGCTGAAGCAGTATCTACATATTTCCAACATAAAACAGGTGATGACGATGAAATCAGTGACAAACCAGATACAACCGGTGCTGTCGCAGAGAAGTCAATTCCTCCGGTGAATTTAAAAATCAAGCTTCCCGAAGTTGCTTGCACTATTTGCGCCCAGAAATTCACCGATCAAGAACTCTTCGCCAAGCACATTCAAATGCACGAGATGGAGCTGTATACGGACAATCCGTTGGCAGCAATGTTTGACACTGGTCCAGCTGATCCGAATCAATTTTATCTAGATCGTGTGAACGACAATGGGCAGTATGTGTGCGATATATGTTCCAAGGCTTTTGTCCAAATGACAGCGCTGAAGGTGCATCGCAAGTGGCATTTTCGAGGTGATAGCAAACAGACTCCTGTCGATTCAAATGCACCCAAAAAGACGGTGAAACGCAAGCGTGAACTTAAATGCGACTATTGTCCGTCAACTTTCATTAGCTCAAACAACCTGCGACGTCACATAGCCGAGCTACACAAATCGGAAATATCTAATTGGCCTGAACCACCTAAAATCGAACCTGAAAAGTACCTACAATGTACCAAGTGTGACCTGAAATTTGAGACCAAGAAAGACTGGATCGATCATAAAGTTATTGAAGCGAAAATTGCCAAGCCTTTTGGTCCTTTCCAGTGGGGATGCGAAATCTGTGGAGTGTATTTGTCGCGGCGCGAAAAGCTCATTCATCACATGTTGGCCCATATAAAAGAAATAAACGGCCAATTGAATTCAGAGGCTGATAATTATCCGGGTGAGAGTAATTCGCAAGACTCGGAGACATCAAGTCATCAAGGGCCTCCCGAACATCCGCCAGCCGATGATGATGAAGCCGAGGAGGAGGAAGAAGAGGAGGAATTTGAAAATGATGAAGATGAAGTTGAAGCTGAAGAAACTGTAGAAACTGAAAATCACGACCAAAATGCAAACGACGGACAAAATGACAGTCCAAAACTGAGACAGCGATTGCAGCGTGAATCTAATGATGAAAGCAACGATTCAACGACCAGCTCCGGCTCAGATGATTCTTCTTCTGATGACGAAGATGCAGATGGTACATCACGCCATGAAGAGATACGAAAACGATATGCCTGCGATTTATGTCAAGTTGATTTCGAATCCTCTAGCGAACTTCAGAAACATGTCACTAGTCATTTCCTCAACGGGCCAGGTTCAGTCACATTAACCACAATAACAAAGGAAAACCCAGCGACGACGACGACCAAGATGATGACGAAGACGACGAAACTGATGCGACGGCGACGTGACGCTCCTAATGACTACTCTAAAAGTGCACGCTATAACCTTTTCGAGTTTATGTGA
Protein Sequence
MTEESILRARQNCCRLCLAPDSECISIFNSYAADKEPLANKIQSCVNIKVSPIDRLSLRICHACISYLNSWQSFKNRCVASQNKQRSWLDISKKFEKKQLIAAAPLSNAAAAAALAGLSHDDGNASGGGAAGGGIPGAVGDEQENIKLASSILEGISSLKKRRSLTVYPIPVHIKDEPIDEEEYDAKHDESDIDPTLFLERTEEEGSDNLSQKEQHLASLGLKQSAGNVHPLSYLADYSFEGEKSQQTSADIKPADISASTTPTNEVKEASCRACNLKFSTRANARRHERNLHPHLFLGGLSSNIPTKALNILSPMTQAIAASVPMIQPAPPAIKSEHFGHFDYDQPEKYQHLLSDDKILFMQRQEDFLQQYQNMTCNCCLRTHATYKNFMAHMRKKYHSLPRNLCFKCLKQNDSKALFISHLKKRNCINLYRVYHSLIDAGVLKKDASSCSPDKLRAKELLVNKIYECKICSKHYRLKLEFRSHVYEEHADYQKKDVSPGHCGFCGLEIEDPFERKRHYNNMDCIVILRCITCEEKFDNHQKFLDHVYSKHLANNNETQKSNLMKELLPPPPATTSNESSPSKKTEIPAKPQFFSRLPQSCNICGQHYNNYNNVLRHMESKHPDQLPQTYKCTRCLIGYPRLMNLREHMIEVHGMKVDKVRNNSFDYIVDSPTVQGSMPRGAEKGTVDAYTGRYDYVMKDLMSITNGGSGGNEGLVDNEDDDSKSDSPTPKKIKLDSSAVMAAGTSNLKECPICSAVFNNNIGLSNHMRTHSTEDGGAVGSGSGSGTAAAVSTGGVSVVGGAGHEEDLHDEDDDAMDKKPIDPLFKRSLELAADRRFRRMRCRICQKRFSSKKSYRRHMLIDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDEMIVKQYECDICSIVYRTEEQLLLHKKSVHGNESAAAEDDLPPSVDQSMEASIAPVYWYQCRYCPSNFNTNKKLAIHINSHYEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPPVADPSECAICKKIFFDKQMLENHTQSCAQKRAAANAAEAVSTYFQHKTGDDDEISDKPDTTGAVAEKSIPPVNLKIKLPEVACTICAQKFTDQELFAKHIQMHEMELYTDNPLAAMFDTGPADPNQFYLDRVNDNGQYVCDICSKAFVQMTALKVHRKWHFRGDSKQTPVDSNAPKKTVKRKRELKCDYCPSTFISSNNLRRHIAELHKSEISNWPEPPKIEPEKYLQCTKCDLKFETKKDWIDHKVIEAKIAKPFGPFQWGCEICGVYLSRREKLIHHMLAHIKEINGQLNSEADNYPGESNSQDSETSSHQGPPEHPPADDDEAEEEEEEEEFENDEDEVEAEETVETENHDQNANDGQNDSPKLRQRLQRESNDESNDSTTSSGSDDSSSDDEDADGTSRHEEIRKRYACDLCQVDFESSSELQKHVTSHFLNGPGSVTLTTITKENPATTTTKMMTKTTKLMRRRRDAPNDYSKSARYNLFEFM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01357261;
90% Identity
iTF_00894192;
80% Identity
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