Basic Information

Gene Symbol
hang
Assembly
GCA_932273905.1
Location
CAKNZR010001282.1:124798-139396[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.046 8.3 8.4 1.3 3 23 264 285 263 285 0.93
2 18 0.075 13 7.7 2.6 1 23 459 482 459 482 0.91
3 18 9.5 1.7e+03 1.1 2.1 3 23 523 544 521 544 0.88
4 18 0.0017 0.31 12.9 1.7 2 23 593 615 592 615 0.95
5 18 0.012 2.2 10.2 0.1 1 23 623 646 623 646 0.95
6 18 3.2e-05 0.0058 18.3 0.1 2 23 743 764 742 764 0.97
7 18 2.2e-05 0.004 18.8 2.5 2 23 837 859 836 859 0.96
8 18 0.0032 0.57 12.0 0.2 2 23 868 890 867 890 0.95
9 18 0.00089 0.16 13.8 0.2 1 23 903 926 903 926 0.97
10 18 0.00036 0.064 15.0 1.0 1 23 955 977 955 977 0.99
11 18 0.0015 0.27 13.1 0.9 1 23 985 1008 985 1008 0.96
12 18 0.01 1.8 10.5 0.2 2 21 1016 1035 1015 1036 0.93
13 18 0.00022 0.04 15.7 0.4 3 23 1093 1113 1092 1113 0.98
14 18 7.2e-05 0.013 17.2 0.1 1 23 1148 1170 1148 1170 0.98
15 18 7.2e-05 0.013 17.2 0.2 2 23 1196 1218 1195 1218 0.93
16 18 0.12 21 7.1 0.8 2 19 1238 1255 1237 1257 0.92
17 18 0.0091 1.6 10.6 0.4 3 23 1273 1293 1273 1293 0.98
18 18 0.0022 0.39 12.6 0.1 1 23 1422 1444 1422 1444 0.97

Sequence Information

Coding Sequence
ATGACGGAAGAATCGATACTACGAGCACGTCAGAATTGCTGTCGCTTGTGCTTGGCTCCGGACAGTGAATGTATTTCGATTTTTAACAGCTATGCGGCTGATAAGGAGCCCCTAGCCAACAAAATTCAATCATGTGTCAATATTAAGGTATCGCCAATTGATAGGCTATCCTTGCGAATATGCCACGCTTGTATCAGCTACTTAAATTCGTGGCAAAGTTTTAAGAATCGCTGTGTTGCTTCGCAAAACAAACAACGCAGCTGGTTGGATATTTCGAAGAAGTTTGAAAAAAAACAGCTTAATGCCGCAGTTCCACTATCTAACACTGCTGCTGCATTAGCAGGGCTAAGTGCATGCCATGACGATGGAAGTACATCAGGTGGAGGAGGAGCAGGTGGTGATGAGCAAGAAAATATTAAACTTGCCTCCTCGATTCTAGAGGGTATTTCATCGCTCAAGAAAAGACGTTCCCTCACAGTTTATCCAATTCCTGTGCACATTAAAGATGAGCCTATCGATGAAGAAGATTACGATACAAAACACGATGAATCAGATATCGATCCGACATTATTTCTGGAACGCACCGAAGAAGAGGGCTCCGATAACTTGTCACAAAAGGAACAACATTTGGCCTCGTTGGGTTTGAAACAATCAGCGGGAACTGTTCATCCGTTAAGTTATTTGGCTGACTACAGTTTTGAAGGCGAAAAGCCCCAACACCCACCAGCTGATAAACAGACAGAGATTACAACTACATCAACACTAATTAATGAAGTTAAAGAAGCATCATGTCGTGCTTGCAATTTAAAATTTTCTACCCGAGCAAATGCTCGACGTCACGAGCGAAATCTTCACCCTCACCTATTCTTAGGTGCTTTGCCAACAAGCATACCAACAAAGGCACTTAATATAATTTCACCAATGACTCAAGCTATTGCGGCAAGCGCCCCAATGGTTCAAACAATACAACCTGCTATGAAATCAGAACAACTGGGTCTCTTCGATTATGACCAGCCGGAAAAGTATCAAAATCTCCTTAGCGATGATAAGATATTGTTCATGCAGCGCCAAGAAGATTTCCTCCAGCAATATCAAAACATGACTTGCAACTGCTGCCTTCGCACACATGCCACTTATAAGAACTTTATGGCACACATGCGTAAAAAGTACCATTCTTTGCCACGTAATCTATGCTTCAAGTGCCTAAAACAAAATGACTCCAAGGCCCTTTTTATATCGCATTTGAAAAAACGTAACTGCATTAACCTATACAAGATCTACCACAGCTTGATTGATGCGGGCGTGTTGAAAAAAGACGCATCTAGCTGCTCTCCCGACAAGCTACGAGCCAAAGAACTTCTTGTAAATAAAATCTACGAATGCAAAATATGCTCCAAGCATTATCGCTTGAAGCTAGAATTTCGCAGTCATGTTTATGAGGAACACGCAGACTACCAAAAGAAAGACGTTTCACCGGGGCATTGCGGATTTTGTGGCTTAGAAATAGAAGATCCCTTTGAAAGAAAGCGGCACTACAACAACATGGATTGCATTGTTATCCTGCGATGCATCACATGCGATGAGAAGTTTGATAACCATCAGAAATTCTTGGACCACGTTTATTCGAAGCATTTGGCTAACAACAACGAAACTCAAAAAAGCAATCTTATGAAGGAACTTCCTCCGCCTCCTCCCGCTACTACCTCAACCGAGAGCTCGCCTTCGAAGAAATCCGAGACTCCTGCAAAGCCGCAATTCTTTTCACGACTACCTCAGAGCTGCAATATTTGCGGTCAACACTACAACAACTATAACAATGTCTTACGTCACATGGAATCAAAGCACCCGGATCAATTGCCACAAACATACAAATGCACTCGCTGTTTGATTGGATATCCACGGCTCATGAATCTTCGTGAGCACATGATCGAAGTTCACGGCATGAAGGTCGATAAAGTGCGTAACAATAGTTTTGATTATATTGTGGACTCGCCCACAGTGCAGGGAAGTATACCGCGAGGAGCCGAAAAAGGGGCCGTTGATTCATACACTGGCCGTTATGATTATGTGATGAAAGACCTAATGTCCATAACTAACGGCGGTTCAGGAGGGAACGAGGGCCCGGCCGATAACGAAGATGAAGATAATAAGTCGGATTCACCAACTCCAAAAAAAATAAAGCTCGAAAGCGGTGCAGTTGTGGCCGTTGGAACTGCAAGTTTGAAAGAATGTCCTATTTGCAGTGCAGTTTTCAATAACAACATTGGACTGTCCAATCATATGAGAACCCACTCTACGGAAGATGGTGCCGGAGGTGGTGGTGGTGGAAGTGCAGGTGGCGTTAGTGCTGGTGGTGCAGGTAGTGCAGGTGGTGCAGGTGGTGCAGGTGGTGGAGTTGTTGAAGATGATGTTCACGACGAAGATGACGATGTAGCGGACAAGAAGCCCATCGATCCACTTTTCAAAAGAAGTCTAGAGTTGGCTGCGGATCGAAGATTCCGACGAATGCGTTGCCGCATTTGCCAGAAACGATTTTCTTCCAAGAAGAGCTATCGTCGCCACATGTTGATCGACCATCAAATTCGGAACGTTCAGTTCATAAAATGCAAACTCTGTGATGCCGAATTCGCTTATGAAAAGGGTCTTAAAGTACACATGTTCAAAATCCACAACACATTGCTAAAGGACGAAATGATTGTTAAGCAGTACGAATGCGATATCTGTTCGATTGTATATCGAACGGAGGAGCAGCTTTTGCTCCATAAGAAGTCAGTACATGGAAATGAAAGTGCTGCCGCTGAAGACGACTTGCCGCCCTCAGTAGATCAAAGCATGGAAGCCTCCACTGCTCCAGTATACTGGTATCAATGCCGTTATTGCCCTTCGAACTTTAACACAAACAAAAAATTGGCCATTCATATAAATTCCCACTATGAATTTGATTCGAATGACTACTCCTGTAAGGATTGTGGAAACGTATATAGCGGCCGCAAAAGTCTTTGGGTACATCGGTACAAAAAGCATCCTCCAGTCGCCGATCCCTCAGAGTGTGTGATTTGCAAGAAAATATTCTTCGACAAACAAATGCTGGAGAATCACACACAATCTTGTGCACAGAAGCGTGCGGCAGCGAGTGCCGCTGAGGCCGCATCTACCTACTTTCAACATAAAACAGGCGATGACGATGAAGTTATTGACAAGCCAGATACAGCCGTTAATGTCGCAGAGAAATTAACTGCTGCGGTGAATATGAAAATAAAGCTTCCGGAAGTAGCATGTACTATCTGTGCCCAGAAATTCACCGATCAAGAACTATTCACCAAACACATCCAAATGCACGAGATGGAGTTGTATACCGACAATCCGTTGGCAGCAATGTTTGACACTGGTCCAGCTGATCCGAATCAGTTCTATCTGGATCGAGTCAATGACAATGGGCAATATGTGTGTGACATATGCTCCAAGGCGTTCGCCCAAATGACAGCGCTGAAGGTTCATCGCAAGTGGCATTTTCGAGGTGATAGCAAACAGACCCCAGTCGATTTAAACGCTCCCAAAAAGACGGTGAAACGCAAGCGTGAACTTAAATGCGACTATTGTCCGTCAACTTTCATTAGCTCAAACAATCTGCGACGTCACATAGCCGAGCTGCATAAATCAGAAATTTCTAACTGGCCCGAACCACCTAAAATCGAACCCGAAAAGTACCTTCACTGCACTAAGTGCGACCTGAAATTTGAAACGAAAAAAGACTGGATCGATCATAAAGTTAATGAAGCGAAGGTTGCCAAACCTTTTGGTCCTTTCCAGTGGGGCTGCGAAATTTGCGGGGTATATTTGTCGCGGCGCGAAAAGCTAATACATCACATGTTGGCCCATATCAAAGAAATAAATGGCCAAGTGAGTTCAGAGGCTGATAATTATCCAGGTGAGAGTAATTCGCAAGACTCGGAGTCATCTAGTCATCATGGGGCGCCGGAACAACCGCCAGCTGAGGATGATGAAGCCGAGGAAGAAGAGGAAGAAGAGGAATTTGAGGGTGATGAAGATGATGCTGATGCTGAACAAACTGTAGAAACTGAAAATCACGACCAAAATGCGAACGATGGACAAAATGAAAGCTCAAAGTTGAGGCAGCGATTGCAGCGTGAATCCAATGATGATAATAGCAACGATTCAACGACAAGCTCTGACTCAGATGGCTCTTCTTCGGATGATGAAGATGCAGAAGGTATATCACTCCATGAAGAGACCAAAAAGCGATACGCCTGCGATTTATGTCAAGTTGACTTTGAGTCCTCTGGCGAACTTCAGAAACATGTCACTAGTCATTTCCTCAATGGGCCAGGTTCAGTCACACTAACCACAATCACAAAGGAGAAGTCAATACCAGCTCAAATACATGCGAAAGTTGATGACGACAACCACAACGATGAAGAGGATGAAGATGAAGATGACGACGACGATGACGATGATAATTTGACCGATGCAGATCCTGTAGATTCATAA
Protein Sequence
MTEESILRARQNCCRLCLAPDSECISIFNSYAADKEPLANKIQSCVNIKVSPIDRLSLRICHACISYLNSWQSFKNRCVASQNKQRSWLDISKKFEKKQLNAAVPLSNTAAALAGLSACHDDGSTSGGGGAGGDEQENIKLASSILEGISSLKKRRSLTVYPIPVHIKDEPIDEEDYDTKHDESDIDPTLFLERTEEEGSDNLSQKEQHLASLGLKQSAGTVHPLSYLADYSFEGEKPQHPPADKQTEITTTSTLINEVKEASCRACNLKFSTRANARRHERNLHPHLFLGALPTSIPTKALNIISPMTQAIAASAPMVQTIQPAMKSEQLGLFDYDQPEKYQNLLSDDKILFMQRQEDFLQQYQNMTCNCCLRTHATYKNFMAHMRKKYHSLPRNLCFKCLKQNDSKALFISHLKKRNCINLYKIYHSLIDAGVLKKDASSCSPDKLRAKELLVNKIYECKICSKHYRLKLEFRSHVYEEHADYQKKDVSPGHCGFCGLEIEDPFERKRHYNNMDCIVILRCITCDEKFDNHQKFLDHVYSKHLANNNETQKSNLMKELPPPPPATTSTESSPSKKSETPAKPQFFSRLPQSCNICGQHYNNYNNVLRHMESKHPDQLPQTYKCTRCLIGYPRLMNLREHMIEVHGMKVDKVRNNSFDYIVDSPTVQGSIPRGAEKGAVDSYTGRYDYVMKDLMSITNGGSGGNEGPADNEDEDNKSDSPTPKKIKLESGAVVAVGTASLKECPICSAVFNNNIGLSNHMRTHSTEDGAGGGGGGSAGGVSAGGAGSAGGAGGAGGGVVEDDVHDEDDDVADKKPIDPLFKRSLELAADRRFRRMRCRICQKRFSSKKSYRRHMLIDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDEMIVKQYECDICSIVYRTEEQLLLHKKSVHGNESAAAEDDLPPSVDQSMEASTAPVYWYQCRYCPSNFNTNKKLAIHINSHYEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPPVADPSECVICKKIFFDKQMLENHTQSCAQKRAAASAAEAASTYFQHKTGDDDEVIDKPDTAVNVAEKLTAAVNMKIKLPEVACTICAQKFTDQELFTKHIQMHEMELYTDNPLAAMFDTGPADPNQFYLDRVNDNGQYVCDICSKAFAQMTALKVHRKWHFRGDSKQTPVDLNAPKKTVKRKRELKCDYCPSTFISSNNLRRHIAELHKSEISNWPEPPKIEPEKYLHCTKCDLKFETKKDWIDHKVNEAKVAKPFGPFQWGCEICGVYLSRREKLIHHMLAHIKEINGQVSSEADNYPGESNSQDSESSSHHGAPEQPPAEDDEAEEEEEEEEFEGDEDDADAEQTVETENHDQNANDGQNESSKLRQRLQRESNDDNSNDSTTSSDSDGSSSDDEDAEGISLHEETKKRYACDLCQVDFESSGELQKHVTSHFLNGPGSVTLTTITKEKSIPAQIHAKVDDDNHNDEEDEDEDDDDDDDDNLTDADPVDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2