Basic Information

Gene Symbol
hang
Assembly
GCA_951394125.1
Location
OX596029.1:90920551-90931655[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.05 4.6 8.4 1.3 3 23 270 291 269 291 0.93
2 17 0.08 7.5 7.7 2.6 1 23 465 488 465 488 0.91
3 17 0.0018 0.17 12.9 1.7 2 23 599 621 598 621 0.95
4 17 0.013 1.2 10.3 0.1 1 23 629 652 629 652 0.95
5 17 3.5e-05 0.0032 18.3 0.1 2 23 749 770 748 770 0.97
6 17 2.4e-05 0.0022 18.8 2.5 2 23 834 856 833 856 0.96
7 17 0.0034 0.32 12.1 0.2 2 23 865 887 864 887 0.95
8 17 0.00095 0.089 13.8 0.2 1 23 900 923 900 923 0.97
9 17 0.00039 0.036 15.0 1.0 1 23 952 974 952 974 0.99
10 17 0.0016 0.15 13.1 0.9 1 23 982 1005 982 1005 0.96
11 17 0.005 0.46 11.5 0.2 2 21 1013 1032 1012 1033 0.92
12 17 0.00024 0.022 15.7 0.4 3 23 1090 1110 1089 1110 0.98
13 17 7.8e-05 0.0072 17.2 0.1 1 23 1145 1167 1145 1167 0.98
14 17 7.7e-05 0.0072 17.2 0.2 2 23 1193 1215 1192 1215 0.93
15 17 0.036 3.3 8.9 0.3 2 19 1235 1252 1234 1254 0.93
16 17 0.006 0.56 11.3 0.4 3 23 1270 1290 1270 1290 0.98
17 17 0.0023 0.22 12.6 0.1 1 23 1416 1438 1416 1438 0.97

Sequence Information

Coding Sequence
ATGACGGAAGAATCGATACTACGAGCACGTCAGAATTGCTGTCGTTTGTGCTTGGCTCCGGACAGTGAATgtatttcgatttttaacaGCTATGCGGCTGATAAGGAGCCCCTAGCCAACAAAATTCAATCATGTGTCAATATTAAGGTATCACCAATTGATAGGCTATCCTTGCGGATATGCCACGCTTGTATCAGTTACTTGAATTCATggcaaagttttaaaaatcgctGTGTGGCTTCGCAAAACAAACAACGCAGCTGGTTGGATATATCGAAAAAGTTTGAAAAGAAACAGCTTAGTGCTGCAGGTTCACTATCCAATACTGCTATTGGATTAGCAGCGCTTAGTGCTTGCCATGATGATGGAAGTGCATCAGGCGGAGGAGGAGGAGGCGGTGGCCCCGGAGAAGGTGGTGACgagcaagaaaatattaaacttgCCTCTTCGATTCTGGAGGGTATTTCTTCGCTCAAGAAAAGACGTTCCCTAACAGTATATccaaTTCCTGTGCACATCAAAGATGAACCAATTGATGAAGAAGATTACGATAACAAACACGATGAATCTGATATCGATCCGACACTATTTCTGGAACGCACCGAAGAAGATGGCTCAGATAATTTGTCACAAAAGGAACAACATTTGGCCTCGTTGGGATTGAAACAATCAGCGGGAACTGTTCATCCCTTGAGTTATTTGgcTGACTACAGTTTTGAAGGCGAAAAGTCCCAACAACCACCAGCTGATAAACCTGCAGAAATTATAACTGCAACAACATCAATTAATGAAGTTAAAGAAGCATCATGCCGTGcttgcaatttaaaattttctaccaGAGCAAATGCTCGACGTCATGAGCGAAATCTTCACCCTCATCTATTTTTAGGTGCATTGCCAAGTAGCATGCCAGCAAAAGCACTTAATATAATTTCACCAATGACACAAGCTATTGCGGCCAGCGCCCCAATGGTTCAAACAATACAACCTTCTATGAAATCAGAACAACTTGGTCTCTTTGATTATGATCAAccggaaaaatatcaaaatcttcTTAGTgatgataaaatattattcatgcaacgtcaaGAAGATTTCCTGCAGCAATATCAAAACATGACTTGCAACTGCTGCCTACGAACACATGCCACTTATAAAAACTTTATGGCTCACATGCGTAAAAAGTATGATTCTTTACCACGTAATTTATGCTTCAAGTGCCTAAAACAGAATGACTCGAAGGCGCTTTTTATATCGCATTTGAAAAAACGAAACTGCATTAATCTATACAAAATCTACCACAGCTTGATTGATGCGGGAGTGTTGAAAAAAGACGCATCTAGTTGTTCTCCGGACAAGCTAAGAGCCAAAGAACTTCTTGTAAATAAAATCTACGAGTGCAAAATATGCTCTAAGCATTACCGTTTGAAACTAGAGTTTCGCAGTCACGTCTACGAGGAACACGCAGATTACCAAAAGAAAGACGTTTCACCGGGACATTGCGGATTTTGTGGCTTAGAAATTGAAGATCCCTTTGAAAGAAAGCGGCACTATAATAACATGGATTGTATTGTTATCCTGCGATGTATTACATGCGAGGAGAAATTCGATAACCATCAGAAATTCTTGGATCACGTTTATTCGAAGCATTTGGCTAACAACAACGAAACTCAAAAGAGCAATCTTATGAAGGAACTTCTCCCGCCTCCTCCAACTACTACCTCAACCGAGAGCTCGCCTTCGAAGAAATCCGAGACTCCTGCAAAGCCGCAATTCTTTTCACGACTACCTCAGAGCTGCAATATTTGCGGTCAACactacaacaactacaacaatgTCTTACGTCACATGGAATCAAAGCATCCGGATCAATTGCCACAAACATACAAATGCACTCGCTGTTTGATTGGATATCCACGGCTTATGAATCTACGTGAGCACATGATCGAGGTACACGGCATGAAGGTCGATAAAGTGCGTAACAATAGTTTTGATTATATTGTGGACTCGCCCACAGTGCAGGGGAGTATACCACGAGGAGCCGAAAAAGGTTCTGTTGATTCATACACTGGCCGTTATGATTATGTAATGAAAGACCTAATGTCCATAACTAACGGTGGTTCGGGGGGCAACGAGGGCCCAGGCGAAAACGAAGATGAAGATAATAAGTCGGATTCACCgactccaaaaaaaataaagctcgaCAGCGGTGCAGTTGTGGCCGTTGGCACTGCAAGTTTAAAAGAATGTCCTATTTGCAGTGCAGTTTTCAATAACAACATTGGACTGTCCAATCATATGCGAACCCACTCTTCGGAAGATGGCGGCGGAGTTAGTGGAGTTGGTAGTGCAGGTGCTGTTATTGCTGGCGCTGCAGGTGGTGGAGGTATTGAAGATGATGTTCACGACGAAGATGACGATGTAGCGGAAAAGAAGCCCATCGATCCACTTTTCAAAAGAAGTCTAGAATTGGCCGCAGATCGAAGATTTCGACGAATGCGTTGCCGTATTTGCCAGAAACGATTCTCCTCCAAGAAGAGCTATCGTCGCCACATGTTGATTGACCATCAAATTCGGAACGTTCAGTTCATTAAATGCAAACTTTGCGATGCagaattcgcttatgaaaaggGTCTCAAAGTACACATGTTCAAAATTCACAACACATTGCTCAAGGACGAAATGATTGTTAAGCAGTACGAATGTGATATATGTTCCATTGTTTACCGAACGGAGGAGCAACTTTTGCTACACAAGAAGTCAGTACATGGAAATGAAAGTGCAGCTGCTGAAGATGACTTGCCGCCTTCAGTAGATCAAAGTATGGAAGCACCCACTGCTCCAGTATACTGGTATCAATGCCGTTATTGCCCTTCGAActttaacacaaacaaaaaactggCTATTCATATAAATTCCCATTATGAATTTGATTCAAATGACTACTCCTGTAAGGATTGTGGAAATGTATATAGCGGCCGCAAAAGTCTTTGGGTACATCGCTACAAGAAACATCCTCCAGTTGCCGATCCCTCAGAGTGTGTGATTTGCAAGAAAACCTTCTTCGACAAACAAATGCTTGAGAACCATGCACAATCTTGTGCACAAAAGCGTGCGACAGCGAGTTCTTTTGAAGCCGTATCTACATACTATCAACATAAAACAGGTGATGACGATGAAGTCAGTGACAAGCCAGATACAGCTGGTGTTGTCGGTGAGAAATCAACCGCTGcggtaaatttgaaaattaagctTCCCGAAGTAGCATGTACTATCTGTGCCCAGAAATTTACCGATCAAGAATTATTCACCAAACACATCCAAATGCACGAGATGGAGTTGTATACCGATAATCCGTTGGCAGCAATGTTTGACACTGGTCCAGCTGATCCAAATCAGTTCTATCTAGATCGAGTCAATGACAATGGGCAATATGTGTGTGACATATGCTCTAAGGCGTTCGCCCAAATGACTGCACTGAAGGTGCATCGCAAGTGGCATTTTCGAGGTGATAGCAAACAGACCCCAGTCGATTCAAACGCACCAAAAAAGACGGTGAAACGCAAGCGTGAACTTAAATGCGACTATTGTCCGTCAACTTTCATTAGCTCAAATAATCTGCGACGTCACATAGCTGAGCTGCATAAATCAGAAATTTCGAATTGGCCCGAACCACCTAAAATCGAACCCGAAAAGTACCTACAATGCACCAAGTGTGACCTGAAATTTGAAACGAAAAAAGACTGGATCGATCATAAAGTTAATGAAGCGAAAGTAGCCAAACCTTTTGGTCCTTTCCAGTGGGGCTGCGAAATTTGCGGGATATATTTGTCGAGACGCGAAAAGCTTATACATCATATGTTGGCCCACATCAAAGAAATAAATGGCCAAGTGAGTTCAGAGGCTGATAACTATCCAGGTGAGAGTAATTCACAAGACTCGGAGTCATCTAGTCATCATGGGGCGCCAGAACAACCGCcagctgatgatgatgaagccGAGGACGAAGAGGAAGAAGAGGAATTCGataatgatgaagatgatgctGAGGAAACTGTAGAAACTGAAAATCACGACCAAAATGCAAACGACGGACAAAATGATAACTCAAAGTTGAGACAACGATTGGAGCGTGAATCCAATGATGATAGCAACGATTCAACGACAAGCTCTGAATCAGATGGTTCTTCTTCGGATGAAGAAGATGCAGAAGGTACATCGCTCCATGAAGAGATCAAAAAAACATACGCCTGCGATTTATGTCAAGTTGACTTTGAATCCTCTGGCGAACTTCAGAAACATGTCACTAGTCATTTCCTCAATGGGCCAGGTTCAGTTACACTAACAACAATCACAAAAGAGAAATCAATACCAGCTCAAATACATTCGAAAGTTGATGACGATAACaatgaagaagatgaagatgaagacgacgatgacgatgataatTTGACCGATGCAGATCCTGTAGATTCATAA
Protein Sequence
MTEESILRARQNCCRLCLAPDSECISIFNSYAADKEPLANKIQSCVNIKVSPIDRLSLRICHACISYLNSWQSFKNRCVASQNKQRSWLDISKKFEKKQLSAAGSLSNTAIGLAALSACHDDGSASGGGGGGGGPGEGGDEQENIKLASSILEGISSLKKRRSLTVYPIPVHIKDEPIDEEDYDNKHDESDIDPTLFLERTEEDGSDNLSQKEQHLASLGLKQSAGTVHPLSYLADYSFEGEKSQQPPADKPAEIITATTSINEVKEASCRACNLKFSTRANARRHERNLHPHLFLGALPSSMPAKALNIISPMTQAIAASAPMVQTIQPSMKSEQLGLFDYDQPEKYQNLLSDDKILFMQRQEDFLQQYQNMTCNCCLRTHATYKNFMAHMRKKYDSLPRNLCFKCLKQNDSKALFISHLKKRNCINLYKIYHSLIDAGVLKKDASSCSPDKLRAKELLVNKIYECKICSKHYRLKLEFRSHVYEEHADYQKKDVSPGHCGFCGLEIEDPFERKRHYNNMDCIVILRCITCEEKFDNHQKFLDHVYSKHLANNNETQKSNLMKELLPPPPTTTSTESSPSKKSETPAKPQFFSRLPQSCNICGQHYNNYNNVLRHMESKHPDQLPQTYKCTRCLIGYPRLMNLREHMIEVHGMKVDKVRNNSFDYIVDSPTVQGSIPRGAEKGSVDSYTGRYDYVMKDLMSITNGGSGGNEGPGENEDEDNKSDSPTPKKIKLDSGAVVAVGTASLKECPICSAVFNNNIGLSNHMRTHSSEDGGGVSGVGSAGAVIAGAAGGGGIEDDVHDEDDDVAEKKPIDPLFKRSLELAADRRFRRMRCRICQKRFSSKKSYRRHMLIDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDEMIVKQYECDICSIVYRTEEQLLLHKKSVHGNESAAAEDDLPPSVDQSMEAPTAPVYWYQCRYCPSNFNTNKKLAIHINSHYEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPPVADPSECVICKKTFFDKQMLENHAQSCAQKRATASSFEAVSTYYQHKTGDDDEVSDKPDTAGVVGEKSTAAVNLKIKLPEVACTICAQKFTDQELFTKHIQMHEMELYTDNPLAAMFDTGPADPNQFYLDRVNDNGQYVCDICSKAFAQMTALKVHRKWHFRGDSKQTPVDSNAPKKTVKRKRELKCDYCPSTFISSNNLRRHIAELHKSEISNWPEPPKIEPEKYLQCTKCDLKFETKKDWIDHKVNEAKVAKPFGPFQWGCEICGIYLSRREKLIHHMLAHIKEINGQVSSEADNYPGESNSQDSESSSHHGAPEQPPADDDEAEDEEEEEEFDNDEDDAEETVETENHDQNANDGQNDNSKLRQRLERESNDDSNDSTTSSESDGSSSDEEDAEGTSLHEEIKKTYACDLCQVDFESSGELQKHVTSHFLNGPGSVTLTTITKEKSIPAQIHSKVDDDNNEEDEDEDDDDDDNLTDADPVDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01357261;
90% Identity
iTF_00894192;
80% Identity
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