Dalb024218.1
Basic Information
- Insect
- Dasysyrphus albostriatus
- Gene Symbol
- hang_1
- Assembly
- GCA_946251825.1
- Location
- CAMIUB010000346.1:590524-603003[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.026 3.9 9.1 1.8 3 23 268 289 267 289 0.94 2 17 0.071 11 7.7 2.6 1 23 462 485 462 485 0.91 3 17 0.0016 0.24 12.9 1.7 2 23 596 618 595 618 0.95 4 17 0.015 2.2 9.9 0.1 1 23 626 649 626 649 0.94 5 17 3.1e-05 0.0046 18.3 0.1 2 23 746 767 745 767 0.97 6 17 2.1e-05 0.0032 18.8 2.5 2 23 835 857 834 857 0.96 7 17 0.003 0.46 12.1 0.2 2 23 866 888 865 888 0.95 8 17 0.00084 0.13 13.8 0.2 1 23 901 924 901 924 0.97 9 17 0.00034 0.051 15.0 1.0 1 23 953 975 953 975 0.99 10 17 0.0015 0.22 13.1 0.9 1 23 983 1006 983 1006 0.96 11 17 0.0046 0.69 11.5 0.2 2 21 1014 1033 1013 1034 0.92 12 17 0.00021 0.031 15.7 0.4 3 23 1091 1111 1090 1111 0.98 13 17 6.9e-05 0.01 17.2 0.1 1 23 1146 1168 1146 1168 0.98 14 17 6.8e-05 0.01 17.2 0.2 2 23 1194 1216 1193 1216 0.93 15 17 0.11 17 7.1 0.8 2 19 1236 1253 1235 1255 0.92 16 17 0.0039 0.58 11.7 0.7 3 23 1271 1291 1271 1291 0.99 17 17 0.0006 0.09 14.3 0.2 1 23 1417 1439 1417 1439 0.97
Sequence Information
- Coding Sequence
- ATGACGGAAGAATCGATACTAAGAGCACGTCAGAATTGCTGTCGCTTGTGCTTGGCTCCGGACAGTGAATGTATTTCGATTTTTAACAGCTATGCGGCTGATAAGGAGCCCCTAGCCAACAAAATTCAATCATGTGTCAATATTAAGGTATCACCAATTGATAGGTTATCCTTGCGAATATGTCACGCTTGTATCAGTTACTTGAACTCATGGCAGAGTTTTAAAAATCGCTGTGTGGCTTCGCAAAACAAACAACGCAGCTGGTTGGATATATCGAAGAAGTATGAAAAGAAACAGCTTAGTGCCGCAGCTCCACTATCTAATGCTGCTGCTGCACTAGCAGGGCTAAGTGCGTGTCATGAAGATGGAAGTTCATCAGGCGTAGGAGGAGGTGGCCCAGGAGGAGTGGGTGATGACCAAGACAATATTAAACTTGCCTCCTCCATTTTAGAGGGTATTTCATCGCTCAAGAAAAGACGTTCCCTCACAGTTTATCCAATTCCTGTGCACATCAAAGATGAGCCACTTGATGAAGAAGATTACGATACAAAACACGATGAATCAGATATCGATCCAACATTATTTCTGGAACGCACCGAAGAAGAAGGTTCAGATAATTTGTCACAAAAGGAACAACATTTGGCCTCGTTGGGTTTGAAACAATCAGCGGGAACTGTTCATCCCTTGAGTTATTTGGCTGATTATAGTTTTGAAGGCGAAAAGTCCCTACAACCACCAGCTGATAAGCCAGCTGAGACCACAGCTACAACAACACCATCGAATGAAGTTAAGGAAGCATCATGTCGTTCTTGTAATTTGAAATTTTCTACCCGCGCAAATGCTCGACGTCACGAGAGGAATCTGCATCCACATCTATTTTTGGGTGCTATGCCAAGCAACATACCTTCAAAAGCACTTAATATAATTTCACCAATGACACAAGCTATTGCGGCCAGTGCCCCAATGGTTCAAACAATACAACCTGTTTTGAAGCCAGAACAACTTGGTCTCTTTGAATATGACCAGCCAGAAAAGTATCAACATCTCCTTAGCGATGATAAGATACTATTCATGCAGCGCCAAGAAGATTTCTTGCAACAATACCAAAACATGACTTGCAACTGCTGCCTTCGCACTCATGCTACTTATAAAAACTTTATGGCACACATGCGTAAAAAATATCACTCATTGCCACGTAACCTATGCTTCAAGTGCTTGAAGCAGAATGACTCCAAGGCACTTTTTATATCGCATTTGAAAAAACGAAACTGTATTAACCTTTACAAGATCTACCATAGCCTGATTGATGCGGGCGTGTTGAAGAAAGACGCATCTAGCTCTACGGACAAGCTACGAGCCAAAGAACTACTTGTGAATAAAATCTACGAGTGCAAAATATGCTCGAAGCATTACCGTTTAAAGCTAGAATTTCGCAGTCATGTTTATGAGGAACATGCAGACTACCAAAAGAAAGACGTTTCACCGGGACATTGCGGTTTTTGTGGATTAGAAATTGAAGATCCGTTTGAAAGAAAGCGTCACTACAATAATATGGATTGCATTGTTATCCTACGATGCATCACATGCGAGGAGAAGTTTGATAATCATCAAAAATTCTTGGATCACGTTTATTCGAAACATTTAGCTAACAACAACGAAACTCAAAAAAGTAATCTTATGAAGGAACTTCCTCCGCCTCCTCCCGCTACTACCTCAACCGAGAGCTCACCTTCGAAGAAATCCGAGACTCCTGCAAAGCCGCAATTCTTTTCACGACTACCTCAGAGCTGCAATATTTGCGGTCAACATTACAACAACTACAACAATGTCTTACGTCACATGGAATCAAAGCATCCAGATCAGTTGCCACAAACATACAAATGCACTCGCTGTTTGATTGGCTATCCGCGGCTCATGAATCTTCGTGAGCACATGATTGATGTACACGGCATGAAGGTCGATAAAGTTCGTAACAATAGCTTTGATTATATTGTGGACTCGCCCACAGTGCAGGGAAGTGTACCGCGAGGAGCCGAGAAAGGGTCCGTTGATTCTTACACGGGCCGTTATGATTATGTAATGAAAGACCTGATGTCCATAACTAATGGTGGTTCAGGAGGGAATGAGGGTCCGGGGGAAAACGAAGACGATGATAATAAATCTGATTCACCGACTCCAAAAAAAATTAAGCTCGAAGGCGGTGCAATCGTGGCTGTTGGCACTGCAAGTTTAAAGGAATGTCCTATTTGCAGTGCAGTTTTTAATAACAACATTGGGCTGTCCAACCACATGCGAACTCACTCTGCGGAAGATATCGGTGGAGTTGGTGGTGGTGCTGGTGGCAGTGCAACCGGTGTTGGTGTTAATGCAGGTGCTGCAGTTAGTGGAGGCGCTGAAGATGATGTTCATGACGATGATGATGATGCAGCAGACAAGAAGCCCATCGATCCACTTTTTAAAAGAAGTCTAGAGTTGGCTGCAGATCGAAGATTCCGAAGAATGCGTTGCCGCATTTGCCAGAAACGATTCTCTTCAAAGAAGAGCTATCGCCGCCACATGTTAATCGACCATCAAATTCGCAATGTTCAGTTCATTAAATGCAAACTTTGCGATGCCGAATTCGCCTATGAAAAGGGCCTGAAAGTTCACATGTTCAAAATTCACAACACATTGCTCAAAGACGAAATGATTGTTAAGCAGTACGAATGCGATATCTGTTCGATCGTATACCGTACAGAAGAGCAGCTCTTGCTCCACAAAAAGTCAGTACATGGAAATGAAAGTGCAGCTGCTGTAGATGACTTGCCGCCCTCAGTAGATCAAAGTATGGAAGCACCCAGTGCTCCAGTGTACTGGTATCAATGCCGATATTGCCCTTCGAACTTTAATACAAACAAAAAACTGGCAATTCATATAAATTCCCACTATGAATTCGATTCAAATGATTACTCCTGTAAGGATTGTGGAAACGTATATAGCGGCCGCAAAAGTCTTTGGGTACATCGCTACAAGAAACATCCTCCAGTCGCCGATCCCTCAGAGTGTTCGATTTGCAAGAAAATCTTCTTCGACAAACAAATGCTTGAGAATCATGCACAATCTTGTGCGCAGAAGCGTGCGGCAGCAAGTGCTGCTGAATCCGTTTCTACATACTTTCAACATAAAACTGGTGATGACGATGAAATTTGTGAAAAGCCAGATACAGGAGGCGCTGTCGCAGAAAAAACTACCGCACCGGTGAATTTAAAAATTAAGCTTCCCGAAGTAGCATGTACCATCTGTGCCCAGAAATTCACCGATCAAGAACTCTTTACCAAACACATTCAAATGCACGAGATGGAGTTGTATACCGATAATCCGTTGGCTGCAATGTTTGACACTGGTCCAGCTGATCCAAATCAATTCTATCTAGATAGAGTGAATGACAACGGGCAATATGTGTGTGACATATGCTCGAAGGCGTTCGCTCAAATGACAGCGCTGAAGGTTCATCGAAAATGGCATTTTCGAGGTGATAGCAAACAGACCCCAGTCGATTCAAACGCACCCAAAAAGACGGTGAAACGCAAGCGTGAACTTAAATGCGACTACTGTCCGTCAACTTTCATTAGCTCAAATAATCTGCGACGTCACATAGCCGAGCTGCATAAGTCAGAAATTTCTAATTGGCCTGAACCACCAAAAATCGAACCTGAAAAGTACCTTCACTGCACCAAGTGTGACCTGAAATTTGAAACGAAAAAAGACTGGATCGACCATAAAGTTAATGAAGCAAAAATTGCCAAACCTTTTGGACCGTTCCAATGGGGTTGCGAAATCTGCGGGGTGTATTTGTCGCGGCGCGAAAAACTTATACATCATATGCTGTCCCATATCAAAGAAATCAATGGCCAAGTGAGTTCAGAAGCCGATAACTATCCATGTGAGAGTAATTCACAGGACTCGGAGTCGTCTAGCCATCATGGGGCCCCCGAAAAACGACCAGCTGATGACGAAGAACCTGAAGAGGAAGACGAAGAAGAGGAAGAAGAGGGTGATGAAGATGAAGCCGAAGAAACTGTAGAAACTGAAAATCACGACCAAAATGCAAACGACGGACAAAATGAAAGCTCAAAGTTGAGGCAGCGGTTGCAGCGTGAGTCCAATGATGACAGTAACGATTCAACCACAAGCTCTGACTCAGATGGTTCTTCTTCGGATGAGGAAGATGCTGATGGTATTTCACCCCATGAGGAGATCAAAAAACGATACGCCTGCGATTTATGTCAAGTTGATTTCGAGTCCTCTAGCGAACTTCAGAAACATGTGACTAGTCATTTCCTCAATGGCCCAGGTTCAGTCACACTAACAACAATCAAAAAGGAAAAGCCAATACCAGCTCAAATACATATGAAAGTTGAAGACGACAACGATGAAGAAGATGAAGACGACGACGACGATGACGAGGAAAATTTGACCGATGCAGAACCTGTAGATTCATAA
- Protein Sequence
- MTEESILRARQNCCRLCLAPDSECISIFNSYAADKEPLANKIQSCVNIKVSPIDRLSLRICHACISYLNSWQSFKNRCVASQNKQRSWLDISKKYEKKQLSAAAPLSNAAAALAGLSACHEDGSSSGVGGGGPGGVGDDQDNIKLASSILEGISSLKKRRSLTVYPIPVHIKDEPLDEEDYDTKHDESDIDPTLFLERTEEEGSDNLSQKEQHLASLGLKQSAGTVHPLSYLADYSFEGEKSLQPPADKPAETTATTTPSNEVKEASCRSCNLKFSTRANARRHERNLHPHLFLGAMPSNIPSKALNIISPMTQAIAASAPMVQTIQPVLKPEQLGLFEYDQPEKYQHLLSDDKILFMQRQEDFLQQYQNMTCNCCLRTHATYKNFMAHMRKKYHSLPRNLCFKCLKQNDSKALFISHLKKRNCINLYKIYHSLIDAGVLKKDASSSTDKLRAKELLVNKIYECKICSKHYRLKLEFRSHVYEEHADYQKKDVSPGHCGFCGLEIEDPFERKRHYNNMDCIVILRCITCEEKFDNHQKFLDHVYSKHLANNNETQKSNLMKELPPPPPATTSTESSPSKKSETPAKPQFFSRLPQSCNICGQHYNNYNNVLRHMESKHPDQLPQTYKCTRCLIGYPRLMNLREHMIDVHGMKVDKVRNNSFDYIVDSPTVQGSVPRGAEKGSVDSYTGRYDYVMKDLMSITNGGSGGNEGPGENEDDDNKSDSPTPKKIKLEGGAIVAVGTASLKECPICSAVFNNNIGLSNHMRTHSAEDIGGVGGGAGGSATGVGVNAGAAVSGGAEDDVHDDDDDAADKKPIDPLFKRSLELAADRRFRRMRCRICQKRFSSKKSYRRHMLIDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDEMIVKQYECDICSIVYRTEEQLLLHKKSVHGNESAAAVDDLPPSVDQSMEAPSAPVYWYQCRYCPSNFNTNKKLAIHINSHYEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPPVADPSECSICKKIFFDKQMLENHAQSCAQKRAAASAAESVSTYFQHKTGDDDEICEKPDTGGAVAEKTTAPVNLKIKLPEVACTICAQKFTDQELFTKHIQMHEMELYTDNPLAAMFDTGPADPNQFYLDRVNDNGQYVCDICSKAFAQMTALKVHRKWHFRGDSKQTPVDSNAPKKTVKRKRELKCDYCPSTFISSNNLRRHIAELHKSEISNWPEPPKIEPEKYLHCTKCDLKFETKKDWIDHKVNEAKIAKPFGPFQWGCEICGVYLSRREKLIHHMLSHIKEINGQVSSEADNYPCESNSQDSESSSHHGAPEKRPADDEEPEEEDEEEEEEGDEDEAEETVETENHDQNANDGQNESSKLRQRLQRESNDDSNDSTTSSDSDGSSSDEEDADGISPHEEIKKRYACDLCQVDFESSSELQKHVTSHFLNGPGSVTLTTIKKEKPIPAQIHMKVEDDNDEEDEDDDDDDEENLTDAEPVDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01357261;
- 90% Identity
- iTF_00894192;
- 80% Identity
- -