Basic Information

Insect: Syrphus vitripennis
Gene Symbol: hang
Assembly: GCA_958431115.1
Location: OY288110.1:84769285-84780851[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.045 6.8 8.4 1.3 3 23 274 295 273 295 0.93

2 17 0.073 11 7.7 2.6 1 23 469 492 469 492 0.91

3 17 0.0017 0.25 12.9 1.7 2 23 603 625 602 625 0.95

4 17 0.012 1.8 10.2 0.1 1 23 633 656 633 656 0.95

5 17 3.1e-05 0.0047 18.3 0.1 2 23 753 774 752 774 0.97

6 17 2.2e-05 0.0033 18.8 2.5 2 23 837 859 836 859 0.96

7 17 0.0031 0.47 12.1 0.2 2 23 868 890 867 890 0.95

8 17 0.00055 0.082 14.4 0.2 1 23 903 926 903 926 0.97

9 17 0.00035 0.053 15.0 1.0 1 23 955 977 955 977 0.99

10 17 0.0015 0.22 13.1 0.9 1 23 985 1008 985 1008 0.96

11 17 0.004 0.6 11.7 0.2 2 21 1016 1035 1015 1036 0.92

12 17 0.00021 0.032 15.7 0.4 3 23 1092 1112 1091 1112 0.98

13 17 7e-05 0.011 17.2 0.1 1 23 1147 1169 1147 1169 0.98

14 17 7e-05 0.011 17.2 0.2 2 23 1195 1217 1194 1217 0.93

15 17 0.12 18 7.1 0.8 2 19 1237 1254 1236 1256 0.92

16 17 0.0089 1.3 10.6 0.4 3 23 1272 1292 1272 1292 0.98

17 17 0.0021 0.32 12.6 0.1 1 23 1419 1441 1419 1441 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.045	6.8	8.4	1.3	3	23	274	295	273	295	0.93
2	17	0.073	11	7.7	2.6	1	23	469	492	469	492	0.91
3	17	0.0017	0.25	12.9	1.7	2	23	603	625	602	625	0.95
4	17	0.012	1.8	10.2	0.1	1	23	633	656	633	656	0.95
5	17	3.1e-05	0.0047	18.3	0.1	2	23	753	774	752	774	0.97
6	17	2.2e-05	0.0033	18.8	2.5	2	23	837	859	836	859	0.96
7	17	0.0031	0.47	12.1	0.2	2	23	868	890	867	890	0.95
8	17	0.00055	0.082	14.4	0.2	1	23	903	926	903	926	0.97
9	17	0.00035	0.053	15.0	1.0	1	23	955	977	955	977	0.99
10	17	0.0015	0.22	13.1	0.9	1	23	985	1008	985	1008	0.96
11	17	0.004	0.6	11.7	0.2	2	21	1016	1035	1015	1036	0.92
12	17	0.00021	0.032	15.7	0.4	3	23	1092	1112	1091	1112	0.98
13	17	7e-05	0.011	17.2	0.1	1	23	1147	1169	1147	1169	0.98
14	17	7e-05	0.011	17.2	0.2	2	23	1195	1217	1194	1217	0.93
15	17	0.12	18	7.1	0.8	2	19	1237	1254	1236	1256	0.92
16	17	0.0089	1.3	10.6	0.4	3	23	1272	1292	1272	1292	0.98
17	17	0.0021	0.32	12.6	0.1	1	23	1419	1441	1419	1441	0.97

Sequence Information

Coding Sequence: ATGACGGAAGAATCGATACTACGAGCACGGCAGAATTGCTGTCGCTTGTGCTTGGCTCCGGACAGTGAATGTATTTCGATTTTTAACAGCTATGCGGCTGATAAGGAGCCCCTAGCCAACAAAATTCAATCATGTGTCAATATTAAGGTATCACCAATTGATAGGCTATCCTTGAGGATATGCCATGCTTGTATCAGTTATTTGAATTCATGGCAGAGTTTTAAAAATCGCTGTGTTGCATCGCAGAATAAACAACGCAGCTGGTTGGATATATCAAAGAAGCTTGAAAAGAAACAGCTTAGCGCGGCAGCTACATTATCTAATGCTGCAGCTGTTGCATTAGCAGGGCTAAGTGGATGCCATGACGATGGAAGTGTATCCGCTAGCAGTGCAGGAGGAGGACTTGGTATCGGTGCTGGAGGAATTAACGATGAGCAAGAGAATATTAAGTATGCATCCTCCATTCTGGAGGGTATTTCATCGCTCAAGAAACGACGTTCCCTTACTGTTTATcctATTCCCGGGCACATCAAAGATGAGCCAATGGATGAAGAAGATTACGATGGAAAACATGATGAATCAGATATCGATCCGACTCTATTTCTGGAACGCACTGAAGAAGAAGGCTCAGATAATTTGTCACAAAAAGAACAACATTTGGCGTCGTTGGGCTTGAAACAATCTGGAGGAAGTGTTCATCCTTTGAGTTATTtggcTGACTACAGTTTTGAAGGTGAAAAGCCTCAACAACCACCAACTGATAAACCGGCTGAGCttacaacaacagcagcatTAACAAATGAAGTTAAAGAAGCATCATGCCGTGcttgcaatttaaaattctcTACTCGAGCAAATGCTCGACGTCACGAGCGAAATCTTCATCCGCATCTGTTCTTAGGTGCTTTGCCTAGCGGCCTACCAACAAAAGCAATCAATATAATGTCACCAATGACACAAGCTATTGTGGCCAGCGCcccaataatcaaaaaaatacagcCTGCTATGAAACCAGATCAACTTGGTCTCTTTGATTATGACCAGCCAGAAAAGTACCAGCATCTCCTGAGCGATGAAAAGATATTATTTATGCAGCGACAAGAAGACTTCCTGCAGCAATATCAAAATATGACTTGCAACTGCTGCCTTCGCACCCATGCCACTTATAAGAACTTTATGGCACACATGCGTAAAAAGTATCATTCATTGCCACGTAATTTATGCTTCAAGTGCCTAAAGCAAAACGACTCGAAAGCGCTTTTTATATCGCATTTGAAAAAACGAAACTGCATTAACCTATACAAGATCTATCACAGCTTGATTGATGCGGGTGTGTTGAAAAAAGACGCATCTAGCTGCTCTCCCGACAAGCTACGAGCCAAAGAACTTCTTGTAAACAAAATCTACGAGTGCAAAATATGCTCAAAGCATTACCGTTTGAAGTTAGAATTTCGTAGTCATGTTTATGAGGAACATGCTGATTACCAAAAGAAAGATGTCTCTCCGGGTCATTGCGGATTTTGTGGCTTAGAAATTGAAGATCCATTTGAAAGAAAACGCCACTACAACAATATGGATTGCATTGTTATCCTGCGATGCATCACATGCGAGGAGAAGTTTGATAACCACCAGAAATTCTTGGATCATGTTTATTCGAAGCACTTAGCTAATAACAACGAGATTCAAAAAAGTAATCTTATGAAAGAACTTGCGCCGCCTCCTCCCGCTACTACCTCAACCGAGAACTCGCCATCGAAGAAATCCGAGCCTCCTGCAAAGCCGCAATTCTTTTCACGACTACCTCAAAGCTGCAATATTTGCGGTCAACactacaacaactacaacaatgTCTTACGTCACATGGAATCAAAGCACCCGGATCAATTGCCACAAACATACAAATGCACTCGCTGTTTGATTGGCTATCCAAGGCTCATGAATCTGCGTGAGCACATGATCGAGGTGCATGGCATGAAAGTTGATAAAGTGCGTAACAATAGTTTTGATTATATTGTGGACTCACCCACAGTGCAAGGAAGTATACCGCGAGGAGCCGAAAAAGGTACAGTTGATTCATACACTGGCCGTTATGATTATGTAATGAAGGATTTAATGTCCATAACGAATGGTGGTTCAGGAGGAAATGATGGAGCGGCCGAAAACGAAGATGAAGATAATAAGTCCGATTCACCgactccaaaaaaaattaagctagaAAGTGGTGCAGTTGTGGCAGTTGGCACTGCCAGTTTAAAGGAATGTCCTATTTGTAGTGCAGTTTTTAATAACAACATTGGACTGTCCAATCATATGCGAACTCACACCACGGAAGATAGCGGCGGAGCTAGTGGTGGTAATGTAATTGCCGGAAGTGTTGTTGGtggtggtgttggtgttggtgatgatgatattcacgatgatgatgacgatgcaGCAGACAAGAAGCCCATCGATCCGCTTTTCAGAAGAAGTTTAGAGTTGGCTGCAGATCGTAGATTCCGACGAATGCGTTGCCGCATTTGCCAGAAACGATTCTCGTCCAAAAAGAGCTATCGTCGCCACATGTTGATCGACCATCAAATTCGAAATGTTCAGTTTATTAAATGTAAGCTCTGCGATGCTGAATTTGCTTATGAAAAGGGTCTTAAAGTACACATGTTCAAAATCCACAACACATTGCTCAAAGACGAAATGATTGTCAAGCAGTATGAATGCGATATCTGTTCGATTGTATACCGAACAGAGGATCAACTTTTGCTCCACAAGAAGTCAGTCCATGGTAATGAAAGTGCTGCTGCCGAAGATGACTTGCCGCCCTCGGTAGATCAAAGTATGGAAGCAACTGCTGCTCCATTATACTGGTATCAATGCCGTTATTGCCCTTCGAactttaacacaaacaaaaaattggccATTCATATAAATTCCCACTATGAATTCGATTCGAATGACTACTCATGTAAGGATTGTGGTAATGTGTATAGCGGTCGCAAAAGTCTGTGGGTACATCGCTACAAGAAACATCCTCCAGTCGCTGATCCCTCTGAGTGCACAATTTGTAAGAAAATCTTCTTCGACAAACAAATGCTGGAGAATCATGCACAATCTTGTGCACAGAAACGTGCGGGAGCAAGTGCTGAAGCTGTAACTACATACTTTCAACATAAAACAGGTGATGACGATGAAGTAAGCGACAAGCCAAATTCAGTCAATATTGTCACAGAGAAGTCAACCATTCcggtaaatttgaaaatcaagcTTCCCGAAGTAGCTTGTACTATTTGTGCCCAGAAATTCACCGATCAAGAACTTTTTACCAAACACATCCAAATGCACGAGATGGAGTTGTATACGGACAATCCGTTGGCAGCAATGTTTGACACTGGTCCAGCTGATCCCAATCAATTCTATCTAGATCGAGTCAATGACAACGGACAGTATGTGTGTGACATATGCTCCAAGGCGTTCGCCCAAATGACAGCGTTGAAGGTTCATCGCAAGTGGCATTTTCGAGGTGATAGCAAACAGACTCCAGTCGATTTAAACGCTCCGAAAAAGACAGTGAAACGTAAGCGTGAACTTAAATGCGACTATTGTCCGTCAACTTTTATCAGCTCAAACAATCTACGACGTCACATAGCCGAGCTGCATAAATCAGAAATTTCCAATTGGCCCGAACCACCTAAAATCGAACCTGAAAAGTACCTTCACTGCACCAAGTGTGACCTGAAATTTGACACGAAAAAAGACTGGATCGATCATAAAGTTAATGAAGCAAAAATTGCTAAACCTTTTGGACCTTTCCAGTGGGGTTGTGAAATTTGCGGGGTATATTTGTCACGTCGCGAAAAACTCATACATCACATGTTGGCCCATATCAAAGAAGTAAATGGCCAAGTGAATTCAGAGGCTGATAATGATAACTATCCGGGTGAAAGTAATTCGCAAGACTCGGAGTTATCTAGTCATCATGGGGCGCCTGAACAACCACcacctgatgatgatgaggcCGAAGACGAGGAGGAAGAGGAAGATGAGGGTGACGAAGATGAAGCCGATGAAACTGTAGAAACTGAAAATCACGACCAAAATGCCAATGATGGACAAAATGAAAGCTCAAAGTTGCGGCAGCGATTACAGCGTGAATCAAACGATGACAGCAACGATTCAACGACAAGTTCCGACTCAGACAATTCATCTTCGGATGAAGAAGATGCCGACGGTTCATCACGCCACGAAGAGATGAAAAAACGATACGCCTGCGATTTATGTCAAGTTGACTTTGAGTCCTCTGGCGAACTTCAGAAACATGTCACTAGTCATTTCCTCAATGGGCCAGGTTCAGTCACACTAACCACAATCACAAAGGAAAAGTCAATGCCAGCTCAAATACCTGCGAAAGTTGATGACGACAACGAGAACGacgaagaagatgaagatgacgacgacgatgatgatgataatttgaCCGATGCAGATCCTGTAGATTCATAA
Protein Sequence: MTEESILRARQNCCRLCLAPDSECISIFNSYAADKEPLANKIQSCVNIKVSPIDRLSLRICHACISYLNSWQSFKNRCVASQNKQRSWLDISKKLEKKQLSAAATLSNAAAVALAGLSGCHDDGSVSASSAGGGLGIGAGGINDEQENIKYASSILEGISSLKKRRSLTVYPIPGHIKDEPMDEEDYDGKHDESDIDPTLFLERTEEEGSDNLSQKEQHLASLGLKQSGGSVHPLSYLADYSFEGEKPQQPPTDKPAELTTTAALTNEVKEASCRACNLKFSTRANARRHERNLHPHLFLGALPSGLPTKAINIMSPMTQAIVASAPIIKKIQPAMKPDQLGLFDYDQPEKYQHLLSDEKILFMQRQEDFLQQYQNMTCNCCLRTHATYKNFMAHMRKKYHSLPRNLCFKCLKQNDSKALFISHLKKRNCINLYKIYHSLIDAGVLKKDASSCSPDKLRAKELLVNKIYECKICSKHYRLKLEFRSHVYEEHADYQKKDVSPGHCGFCGLEIEDPFERKRHYNNMDCIVILRCITCEEKFDNHQKFLDHVYSKHLANNNEIQKSNLMKELAPPPPATTSTENSPSKKSEPPAKPQFFSRLPQSCNICGQHYNNYNNVLRHMESKHPDQLPQTYKCTRCLIGYPRLMNLREHMIEVHGMKVDKVRNNSFDYIVDSPTVQGSIPRGAEKGTVDSYTGRYDYVMKDLMSITNGGSGGNDGAAENEDEDNKSDSPTPKKIKLESGAVVAVGTASLKECPICSAVFNNNIGLSNHMRTHTTEDSGGASGGNVIAGSVVGGGVGVGDDDIHDDDDDAADKKPIDPLFRRSLELAADRRFRRMRCRICQKRFSSKKSYRRHMLIDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDEMIVKQYECDICSIVYRTEDQLLLHKKSVHGNESAAAEDDLPPSVDQSMEATAAPLYWYQCRYCPSNFNTNKKLAIHINSHYEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPPVADPSECTICKKIFFDKQMLENHAQSCAQKRAGASAEAVTTYFQHKTGDDDEVSDKPNSVNIVTEKSTIPVNLKIKLPEVACTICAQKFTDQELFTKHIQMHEMELYTDNPLAAMFDTGPADPNQFYLDRVNDNGQYVCDICSKAFAQMTALKVHRKWHFRGDSKQTPVDLNAPKKTVKRKRELKCDYCPSTFISSNNLRRHIAELHKSEISNWPEPPKIEPEKYLHCTKCDLKFDTKKDWIDHKVNEAKIAKPFGPFQWGCEICGVYLSRREKLIHHMLAHIKEVNGQVNSEADNDNYPGESNSQDSELSSHHGAPEQPPPDDDEAEDEEEEEDEGDEDEADETVETENHDQNANDGQNESSKLRQRLQRESNDDSNDSTTSSDSDNSSSDEEDADGSSRHEEMKKRYACDLCQVDFESSGELQKHVTSHFLNGPGSVTLTTITKEKSMPAQIPAKVDDDNENDEEDEDDDDDDDDNLTDADPVDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01357261;
90% Identity: iTF_00894192;
80% Identity: -