Basic Information

Gene Symbol
hang
Assembly
GCA_945859775.1
Location
CAMAOS010000437.1:625150-639565[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.045 5.8 8.4 1.3 3 23 265 286 264 286 0.93
2 18 0.073 9.4 7.7 2.6 1 23 461 484 461 484 0.91
3 18 9.2 1.2e+03 1.1 2.1 3 23 525 546 523 546 0.88
4 18 0.0017 0.21 12.9 1.7 2 23 595 617 594 617 0.95
5 18 0.019 2.5 9.6 0.1 1 23 625 648 625 648 0.95
6 18 3.1e-05 0.004 18.3 0.1 2 23 745 766 744 766 0.97
7 18 2.2e-05 0.0028 18.8 2.5 2 23 835 857 834 857 0.96
8 18 0.0031 0.4 12.0 0.2 2 23 866 888 865 888 0.95
9 18 0.0011 0.15 13.4 0.2 1 23 901 924 901 924 0.97
10 18 0.00035 0.045 15.0 1.0 1 23 953 975 953 975 0.99
11 18 0.0015 0.19 13.1 0.9 1 23 983 1006 983 1006 0.96
12 18 0.0089 1.1 10.6 0.1 2 21 1014 1033 1013 1034 0.92
13 18 0.00021 0.028 15.7 0.4 3 23 1091 1111 1090 1111 0.98
14 18 7e-05 0.009 17.2 0.1 1 23 1146 1168 1146 1168 0.98
15 18 7e-05 0.009 17.2 0.2 2 23 1194 1216 1193 1216 0.93
16 18 0.11 15 7.1 0.8 2 19 1236 1253 1235 1255 0.92
17 18 0.0088 1.1 10.6 0.4 3 23 1271 1291 1271 1291 0.98
18 18 0.00061 0.079 14.3 0.2 1 23 1420 1442 1420 1442 0.97

Sequence Information

Coding Sequence
ATGACGGAAGAATCGATACTACGAGCACGTCAGAATTGCTGTCGCTTGTGCTTGGCTCCGGACAGTGAATGTATTTCAATTTTTAACAGCTATGCGGCTGATAAGGAGCCCCTAGCCAACAAAATTCAATCATGTGTCAATATTAAGGTTTCGCCTATTGATAGATTATCGTTGCGGATATGCCACGCTTGTATCAGTTACTTGAACTCGTGGCAGAGTTTCAAGAATCGTTGTGTGGCGTCACAGAACAAACAACGCAGTTGGTTGGATATATCGAAGAAGTTCGAAAAGAAACAGCTCATAGCCGCGACACCATTATCTAATGCCGCGGCTGCAGCTGCCCTAGCAGGACTATCTCATGATGATGGGAGTGTACCAGGGGGAGGCGGCACTACTGGAGATGACCAAGAAAATCTAAAACTTGCCACCTCCATTCTGGAGGGTATTTCATCGCTTAAGAAAAGACGATCCCTCACAGTATATCCAATTCCAGTGCACATCAAAGATGAGCCCATTGATGAAGAAGAATACGATGCTAAGCATGATGAATCCGATATCGATCCAACACTATTTCTAGAACGTAACGAAGAAGAAGGCTCAGATAACTTGTCACAAAAAGAACAACATTTGGCCTCGTTGGGATTGAAACAATCGGCGGGAAATGTCCATCCCTTGAGTTATTTGGCTGACTACAATTTCGAAGGCGAAAAATCCCAACAACAATCAGCTGATATTAAACCAGCCGATCTAACATCTTCAACAACACCAACAAATGAAGTAAAAGAAGCATCATGTCGTGCATGCAATTTGAAATTCTCCACCCGAGCAAATGCTCGACGTCACGAACGCAATCTTCATCCTCACCTGTTCTTGGGTGCTTTGTCGCAAAGCAGCATAGCCACAAAAGCACTCAGTTTAATTTCACCAATGACACAAGCTATTGCGGCCAGCGTTCCAATGGCTCAAACAATACAACCCGCTATTAAATCCGAACAGCTTGGTCTCTTCGACTATGACCAGCCAGAAAAATACCAACACCTCCTGAGCGACGATAAGATATTGTTCATGCAGCGACAGGAGGATTTCCTGCAGCAATATCAAAACATGACCTGCAACTGCTGCCTTCGCACTCATGCCACTTACAAGAACTTCATGGCACACATGCGTAAAAAATATCATTCGCTACCGCGTAATTTGTGCTTTAAGTGTCTCAAACAGAACGACTCGAAGGCGCTTTTCATATCGCATTTGAAGAAACGCAACTGCATTAACCTTTACAGGGTCTACCATAGCTTGATTGATGCCGGCGTGTTGAAAAAAGACGCATCTAGCTGCTCGCCGGACAAGCTACGAGCCAAAGAACTTCTTGTAAATAAAATCTACGAGTGCAAAATATGCTCCAAACACTACCGTTTGAAGCTGGAATTCCGCAGCCACGTTTACGAGGAACATGCAGACTATCAAAAGAAGGACGTTTCACCGGGTCATTGCGGATTTTGTGGGTTGGAAATCGAAGATCCGTTCGAAAGGAAGCGCCACTATAATAACATGGATTGCATTGTGATCCTGCGGTGCATCACGTGCGATGAGAAGTTCGATAACCATCAGAAATTCTTGGACCACGTTTACTCGAAACATCTGGCTAACAACAACGAAGCTCTAAAGAGCAATCTTATGAAGGAACTTCTGCCACCTCCTCCCGCTACTACCTCAACCGAGAGCTCGCCTTCGAAGAAATCCGACATCCCTGCAAAGCCGCAATTCTTTTCACGACTACCTCAGAGCTGCAATATTTGCGGCCAACATTACAACAACTACAACAACGTCTTACGTCATATGGAATCGAAGCACCCCGATCAACTACCCCAAACGTACAAATGCACTCGTTGTTTGGTTGGCTATCCAAGGCTAATGAATCTGCGAGAGCACATGATCGAGGTGCACGGCATGAAGGTGGACAAAGTGCGTAACAACAGTTTTGATTATATCGTGGACTCGCCAACGGTGCAGGGAAGCATTCCGCGTGGAGCCGAAAAGGGTGTTGTCGATGCATACACTGGACGTTATGATTATGTCATGAAAGACCTCATGTCCATAACCAACGGTGGCTCAGGCGGAAATGATGGTATGGCCGACAACGAAGACGAAGATAATAAGTCCGACTCACCGACCCCTAAGAAAATAAAGCTTGACAGCGGAGCCGTTGTGGCGGTGGGTACTGCAAGTCTAAAAGAATGTCCAATTTGCAGTGCAGTTTTCAATAATAACATTGGCTTGTCCAATCATATGCGAACCCATTCAACAGAAGATGGGGGCGCAGTTGGTGGTGGAAGTACCGCTGGTGTAAGTACAGCTGGAGGTGTAAGTATAAGTGTTGTGGGAGGTGCGGGTGTAGAAGATGACCTCCATGACGAAGATGACGATGCAGCGGACAAGAAGCCCATCGATCCGCTTTTCAAAAGAAGCCTGGAGTTGGCGGCAGATCGAAGATTCCGACGAATGCGATGCCGCATTTGCCAGAAACGGTTCTCCTCCAAGAAGAGCTATCGCCGTCACATGTTGATTGACCATCAAATTCGCAACGTCCAGTTCATTAAATGCAAATTGTGCGACGCAGAATTCGCTTACGAAAAGGGTCTTAAGGTTCACATGTTCAAAATCCACAACACATTGCTCAAGGACGAAATGATTGTCAAGCAGTTCGAGTGCGACATCTGTTCAATTGTATACCGAACGGAGGAGCAGCTGTTGCTCCACAAGAAGTCAGTGCACGGCAATGAGAGTGCAGCTGCCGAAGATGACTTGCCGCCCTCAGTGGATCAGAGTATGGAAGCCTCGATTGCTCCAGTATACTGGTATCAATGCCGCTATTGCCCCTCCAACTTTAACACCAACAAAAAATTGGCCATTCACATTAATTCCCACTACGAGTTCGATTCGAACGACTACTCCTGTAAAGATTGTGGAAATGTTTACAGCGGCCGCAAAAGCCTCTGGGTACATCGCTACAAGAAGCATCCACCGGTCGCCGATCCCTCAGAGTGTGGCATTTGTAAGAAAATCTTCTTCGACAAACAAATGTTGGAGAACCACGCACAGTCTTGTGCCCAGAAACGTGCGGCAGCCAATGCTGCCGAATCTGCATCTACATATTTTCAACACAAAACAGGTGATGACGATGAAATGAGTGACAAACCAGACACCATCAGTGCTATCGCAGAGAAGTCAACTGCTCCGGTGAATTTAAAAATTAAACTCCCCGAAGTTGCGTGTACAATTTGTGCCCAGAAATTCACCGATCAAGAACTCTTTACCAAACACATTCAAATGCACGAGATGGAGCTGTATACGGATAATCCGTTGGCGGCAATGTTTGACACTGGTCCAGCTGATCCCAATCAATTCTATTTGGATCGGGTCAATGACAATGGACAATATGTTTGTGACATATGTTCAAAGGCGTTTGCCCAAATGACGGCGCTGAAGGTTCATCGAAAATGGCATTTTCGAGGTGATAGCAAACAGACTGCAGTCGATTTAAATGCACCCAAAAAGACGGTGAAACGCAAGCGTGAACTTAAATGCGACTATTGTCCGTCAACTTTCATTAGCTCAAACAATCTGCGACGTCACATAGCCGAGCTACATAAATCAGAAATTTCCAATTGGCCTGAACCACCTAAAATCGAACCTGAAAAGTACCTTCATTGCACCAAGTGTGACCTGAAATTTGAAACAAAGAAAGACTGGATCGACCATAAAGTGAATGAAGCAAAAATTGCCAAACCTTTTGGTCCGTTCCAGTGGGGATGCGAAATCTGCGGGGTATATTTGTCGCGGCGTGAAAAGCTCATACATCACATGTTGGCCCATATCAAAGAAGTAAACGGCCAAGTGAATTCAGAGGCTGATAACTATCCGGGTGAGAGTAATTCGCAAGACTCGGAGACATCTAGTCATCATAGGGTGCCCGAACATCCGCCACCAGATGAAGATGAAGCCGAGGAGGAGGAAGAAGAAGAGGAGGAGTTTGAGAATGACGATGATGAAGCTGAAGCTGAAGAAACAGTGGAAGCTGAAAATCACGACCAAAATGCCAACGACGGACAAAATGAAAGCTCAAAACTGAGGCAACGATTGCAGCGTGATTCAAATGATGAAAGCAACGATTCCACAACAAGCTCCGACTCCGATGGTTCTTCTTCGGATGAAGAAGATGCCGATGGTACATCACGCCACGAAGAAACAAAAAAACGATATGCCTGCGATTTATGTCAAGTTGATTTCGAATCCTCTAGCGAACTTCAGAAACATGTCACTAGTCATTTCCTCAACGGTCCAGGTTCAGTCACATTAACCACAATAACAAAGGAAAAGTCAATACCAGCTCAGATACATCATGCGAAAGTTGACGACGACAATGACAATGATAACGACGAAGAAGATGAAGATGACGACGATGATGACGATGACAATTTAACCGATGCAGATCCTGTAGATTCATAA
Protein Sequence
MTEESILRARQNCCRLCLAPDSECISIFNSYAADKEPLANKIQSCVNIKVSPIDRLSLRICHACISYLNSWQSFKNRCVASQNKQRSWLDISKKFEKKQLIAATPLSNAAAAAALAGLSHDDGSVPGGGGTTGDDQENLKLATSILEGISSLKKRRSLTVYPIPVHIKDEPIDEEEYDAKHDESDIDPTLFLERNEEEGSDNLSQKEQHLASLGLKQSAGNVHPLSYLADYNFEGEKSQQQSADIKPADLTSSTTPTNEVKEASCRACNLKFSTRANARRHERNLHPHLFLGALSQSSIATKALSLISPMTQAIAASVPMAQTIQPAIKSEQLGLFDYDQPEKYQHLLSDDKILFMQRQEDFLQQYQNMTCNCCLRTHATYKNFMAHMRKKYHSLPRNLCFKCLKQNDSKALFISHLKKRNCINLYRVYHSLIDAGVLKKDASSCSPDKLRAKELLVNKIYECKICSKHYRLKLEFRSHVYEEHADYQKKDVSPGHCGFCGLEIEDPFERKRHYNNMDCIVILRCITCDEKFDNHQKFLDHVYSKHLANNNEALKSNLMKELLPPPPATTSTESSPSKKSDIPAKPQFFSRLPQSCNICGQHYNNYNNVLRHMESKHPDQLPQTYKCTRCLVGYPRLMNLREHMIEVHGMKVDKVRNNSFDYIVDSPTVQGSIPRGAEKGVVDAYTGRYDYVMKDLMSITNGGSGGNDGMADNEDEDNKSDSPTPKKIKLDSGAVVAVGTASLKECPICSAVFNNNIGLSNHMRTHSTEDGGAVGGGSTAGVSTAGGVSISVVGGAGVEDDLHDEDDDAADKKPIDPLFKRSLELAADRRFRRMRCRICQKRFSSKKSYRRHMLIDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDEMIVKQFECDICSIVYRTEEQLLLHKKSVHGNESAAAEDDLPPSVDQSMEASIAPVYWYQCRYCPSNFNTNKKLAIHINSHYEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPPVADPSECGICKKIFFDKQMLENHAQSCAQKRAAANAAESASTYFQHKTGDDDEMSDKPDTISAIAEKSTAPVNLKIKLPEVACTICAQKFTDQELFTKHIQMHEMELYTDNPLAAMFDTGPADPNQFYLDRVNDNGQYVCDICSKAFAQMTALKVHRKWHFRGDSKQTAVDLNAPKKTVKRKRELKCDYCPSTFISSNNLRRHIAELHKSEISNWPEPPKIEPEKYLHCTKCDLKFETKKDWIDHKVNEAKIAKPFGPFQWGCEICGVYLSRREKLIHHMLAHIKEVNGQVNSEADNYPGESNSQDSETSSHHRVPEHPPPDEDEAEEEEEEEEEFENDDDEAEAEETVEAENHDQNANDGQNESSKLRQRLQRDSNDESNDSTTSSDSDGSSSDEEDADGTSRHEETKKRYACDLCQVDFESSSELQKHVTSHFLNGPGSVTLTTITKEKSIPAQIHHAKVDDDNDNDNDEEDEDDDDDDDDNLTDADPVDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01357261;
90% Identity
iTF_00894192;
80% Identity
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