Basic Information

Gene Symbol
hang_1
Assembly
GCA_947049305.1
Location
CAMRIP010000196.1:2636786-2652369[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.046 5.8 8.4 1.3 3 23 269 290 268 290 0.93
2 17 0.075 9.3 7.7 2.6 1 23 464 487 464 487 0.91
3 17 0.0017 0.21 12.9 1.7 2 23 598 620 597 620 0.95
4 17 0.012 1.5 10.2 0.1 1 23 628 651 628 651 0.95
5 17 3.2e-05 0.004 18.3 0.1 2 23 748 769 747 769 0.97
6 17 2.2e-05 0.0028 18.8 2.5 2 23 841 863 840 863 0.96
7 17 0.0032 0.4 12.0 0.2 2 23 872 894 871 894 0.95
8 17 0.00052 0.064 14.5 0.1 1 23 907 930 907 930 0.97
9 17 0.00036 0.045 15.0 1.0 1 23 959 981 959 981 0.99
10 17 0.0015 0.19 13.1 0.9 1 23 989 1012 989 1012 0.96
11 17 0.0054 0.67 11.3 0.2 2 21 1020 1039 1019 1040 0.93
12 17 0.00022 0.027 15.7 0.4 3 23 1097 1117 1096 1117 0.98
13 17 3.5e-05 0.0044 18.2 0.3 1 23 1152 1174 1152 1174 0.98
14 17 7.2e-05 0.0089 17.2 0.2 2 23 1200 1222 1199 1222 0.93
15 17 0.051 6.3 8.3 0.4 2 19 1242 1259 1241 1261 0.93
16 17 0.0091 1.1 10.6 0.4 3 23 1277 1297 1277 1297 0.98
17 17 0.00063 0.078 14.3 0.2 1 23 1424 1446 1424 1446 0.97

Sequence Information

Coding Sequence
ATGACGGAAGAATCGATACTACGAGCACGTCAGAATTGCTGTCGCTTGTGCTTGGCTCCGGACAGTGAATGTATTTCGATTTTTAACAGCTATGCGGCTGATAAGGAGCCCCTAGCCAACAAAATTCAATCATGTGTCAATATTAAGGTATCACCAATCGATAGGCTATCTTTGCGGATATGCCACGCTTGTATCAGTTACTTGAATTCATGGCAAAGTTTTAAGAATCGCTGTATAGCTTCGCAAAATAAACAACGTAGCTGGTTGGATATATCAAAGAAGTTTGAGAAGAAACAACTTAGTGCCGCAGCTCCACTATCTAATGCTGCAACTGCATTAGCAGGAATAGGTACATGCCATGACGATGGAAGTGCATCGGGCGGAGGAGGAGGTGGTGGCGCCGCAGGAGTTGGTGACGAGgaagaaaatattaaacttgCTTCTTCGATTCTTGAGGGTATCTCATCGCTGAAGAAAAGACGGTCCCTCACAGTTTATccaATTCCTGTGCACATTAAAGATGAACCAATTGATGAAGATGATTACGATACAAAACACGATGAATCAGATATCGATCCGACACTATTTCTGGAACGCACTGAAGAAGATGGCTCGGATAACTTGTCACAAAAGGAACAGCATTTGGCATCGTTGGGATTGAAACAATCAGCGGGAAATCTTCATCCCTTGAGTTATTTGgcTGACTATAGTTTTGAAGGCGAAAAGCCCCAACAAACACCGGCTGATAAACCGGCCGAAATCACAACTACAGCATCATCAATTAATGAAGTTAAAGAAGCATCATGTCGTGcttgcaatttaaaattttctaccagAGCAAATGCTCGACGTCACGAGCGAAATCTTCACCCTCACCTTTTCTTAGGTGCTTTGCCAACCAGCTTACCAACAAAAGCACTTAATTTAACTTCACCAATGACACAAGCTATTGCCGCCAGCGCCCCAATGGTTCAAACAATGCAACCAGCTATTAAATCAGAACAAATTGGTCTCTTTGATTATGACCAGCcggaaaaatatcaaaatctccTTAGCGATGAGAAGATATTGTTCATGCAGCGTCAAGATGATTTCCTGCAGCAATATCAAAACATGACTTGCAATTGCTGTCTTCGCACACATGCTACTTATAAGAACTTTATGGCTCACATGCGTAAAAAGTATCATTCTTTGCCACGTAATTTATGCTTCAAGTGCCTAAAGCAAAATGACTCCAAGGCGCTTTTTATATCGCATTTGAAAAAACGAAATTGCATTAACCTATACAAAATCTACCACAGCCTGATTGATGCAGGCGTGTTGAAAAAAGACGCATCTAGCTGCTCTCCAGACAAGCTACGAGCCAAAGAACTTCTTGTAAATAAAATCTACGAGTGCAAAATATGCTCTAAGCATTATCGTTTGAAGTTAGAGTTTCGCAGTCATGTCTATGAGGAACATGCAGATTACCAAAAGAAAGACGTTTCACCGGGTCATTGCGGATTTTGTGGCTTAGAAATTGAAGATCCCTTTGAAAGAAAACGGCACTACAATAACATGGATTGTATTGTTATCTTGCGTTGCATTACATGCGAGGAGAAGTTTGATAACCATCAGAAATTCTTGGATCACGTTTATTCGAAACATTTAGCTAACAACAACGAAACTCAAAAAAGCAGTCTTATGAAGGAACTGCTCCCGCCTCCTCCCGCTACTACCTCAACCGAGAGTTCGCCTTCGAAGAAATCCGAGAATCCTGCAAAGCCGCAATTCTTTTCACGACTACCTCAGAGCTGCAATATTTGCGGTCAACActacaacaactacaacaatgTCTTACGTCACATGGAATCAAAGCACCCTGATCAATTGCCACAAACATACAAATGCACTCGTTGTTTGATTGGATATCCGCGGCTCATGAATCTTCGTGAGCACATGATCGAAGTACATGGCATGAAGGTCGATAAAGTGCGTAACAATAGTTTTGATTATATTGTGGACTCGCCCACAGTGCAGGGAAGTATACCGCGAGGAGCCGAAAAAGGTTCTGTTGATTCTTATACTGGCCGTTATGATTATGTAATGAAAGACTTGATGTCCATAACTAATGGTGGTTCCGGAGGGAACGAGGGCCCAGCTGAAAACGAAGATGAAGATAATAAGTCCGATTCACCgactccaaaaaaaataaagctcgaCAGTGGTGCAGTTGTGGCCGTTGGAACTGCAAGTTTAAAGGAATGTCCCATTTGCAGTGCAGTTTTCAACAACAATATTGGATTGTCCAATCATATGCGAACCCATTCTACGGAAGATAGCGGCGGTGGTGTTGGTGGTGTTGGTGGtgttggtggtggtggtggtggagcAGCTGGTGTTAGTGCTGGCAGTGCAGGTGGTGGAGGTGTTGAAGATAATGTTCACGACGAAGATGACGATGCAGCGGACAAGAAGCCCATCGATCCACTTTTCAAAAGAAGTCTTGAGTTAGCTGCAGATCGCAGATTCCGACGAATGCGTTGCCGCATTTGCCAAAAACGATTCTCCTCCAAGAAGAGCTATCGTCGCCACATGTTGATCGACCATCAAATTCGAAATGTTCAGTTCATTAAATGCAAACTTTGCGATGCCGAATTCGCTTACGAAAAGGGTCTTAAAGTACACATGTTTAAAATCCACAACACATTGCTCAAAGACGAAATGATTGTTAAGCAATACGAATGCGATATCTGTTCAATTGTATACCGAACGGAGGAGCAGCTTTTGGTCCATAAGAAGTCAGTCCATGGAAATGAAAGTGCAGCTGCTGAAGATGACTTGCCGCCCTCAGTAGATCAAAGCATGGAAGCCTCCATTGCTCCAGTATACTGGTATCAATGCCGTTATTGCCCTTCGAActttaacacaaacaaaaaactggCCATTCATATTAATTCCCACTATGAATTTGATTCGAATGACTATTCCTGTAAGGATTGTGGAAATGTTTATAGTGGCCGTAAAAGCCTTTGGGTACATCGCTACAAGAAACATCCCCCAGTCGCCGATCCCTCTGAGTGCGGGATTTGCAAGAAAATCTTCTTCGACAAACAAATGCTTGAGAATCACACACAATCTTGTGCACAAAAGCGTGCAGCAGCGAGTGCTGCTGAAGCCGTATCTACATACTTTCAACATAAAAcaggtgatgatgatgaagtgAGTGACAAGCCAGATACAAGCGGTGTTATCGGAGAGAAATCAACCGCTGcgatgaatttgaaaattaagctTCCCGAAGTAGCATGTACTATCTGTGCCCAGAAATTCACCGACCAAGAACTCTTCACCAAACACATCCAAATGCACGAGATGGAGTTGTATACCGATAATCCGTTGGCAGCAATGTTTGACACTGGTCCAGCTGATCCgaatcaattttatctagatcGAGTAAATGACAACGGGCAATATGTGTGTGACATATGCTCCAAGACGTTCGCCCAAATGACAGCGTTGAAGGTTCATCGCAAGTGGCATTTTCGAGGTGATAGCAAACAGACCCCCGTCGATTCAAACGCACCCAAAAAGACGGTGAAACGCAAGCGTGAACTTAAATGCGACTATTGTCCATCAACTTTCATTAGCTCAAACAATCTGCGACGTCACATAGCTGAGCTGCATAAATCAGAAATATCCAATTGGCCTGAACCACCTAAAATCGAACCCGAAAAGTACCTACAATGCACCAAGTGCAACCTGAAATTCGAGACGAAAAAAGACTGGATCGATCATAAAGTTAATGAAGCGAAGGTTGCCAAACCTTTTGGTCCTTTCCAGTGGGGTTGCGAAATTTGTGGGGTATATTTATCGCGTCGCGAAAAGCTCATACATCACATGTTGGCTCACATCAAAGAAATTAATGGCCAACTTAGTACAGGGGCTGATAACTATCCAGGTGAGAGTAATTCTCAAGACTCGGAATCATCTAGTCATCAAGGTGCACCCGAACAACCACCAGCTGATGAAGATGAAGCCGAGGAGGAGgatgaagaagaagaggaaTTCGAAGGTGATGAAGATGATGCCGAAGAAACTGTAGAAACGGAAAATCACGATCAAAATGCCAATGATGGACAAAATGAAAGTTCAAAGTTGAGGCAGCGATTGGAGCGAGAATCCAATGACGACAGCAATGACTCAACGACAAGCTCTGAATCAGAAGGTTCTTCTTCGGATGAGGAAGACGCAGAAGGTACATCACTCCATgaagagacaaaaaaaagataCGCGTGCGATTTATGTCAAGTTGACTTTGAGTCCTCTAGCGAACTTCAGAAACATGTCACAAGTCACTTCCTCAATGGGCCAGGTTCAGTCACACTAACCACTATCACAAAAGAGAAATCCGTACCAGCTCAAATACATGCGAAAGTTGATGATGACAACaatgatgaagatgaagatgatgacgacgatgacgatgataATTTGACCGATGCAGATCCTGTAGATTCATAA
Protein Sequence
MTEESILRARQNCCRLCLAPDSECISIFNSYAADKEPLANKIQSCVNIKVSPIDRLSLRICHACISYLNSWQSFKNRCIASQNKQRSWLDISKKFEKKQLSAAAPLSNAATALAGIGTCHDDGSASGGGGGGGAAGVGDEEENIKLASSILEGISSLKKRRSLTVYPIPVHIKDEPIDEDDYDTKHDESDIDPTLFLERTEEDGSDNLSQKEQHLASLGLKQSAGNLHPLSYLADYSFEGEKPQQTPADKPAEITTTASSINEVKEASCRACNLKFSTRANARRHERNLHPHLFLGALPTSLPTKALNLTSPMTQAIAASAPMVQTMQPAIKSEQIGLFDYDQPEKYQNLLSDEKILFMQRQDDFLQQYQNMTCNCCLRTHATYKNFMAHMRKKYHSLPRNLCFKCLKQNDSKALFISHLKKRNCINLYKIYHSLIDAGVLKKDASSCSPDKLRAKELLVNKIYECKICSKHYRLKLEFRSHVYEEHADYQKKDVSPGHCGFCGLEIEDPFERKRHYNNMDCIVILRCITCEEKFDNHQKFLDHVYSKHLANNNETQKSSLMKELLPPPPATTSTESSPSKKSENPAKPQFFSRLPQSCNICGQHYNNYNNVLRHMESKHPDQLPQTYKCTRCLIGYPRLMNLREHMIEVHGMKVDKVRNNSFDYIVDSPTVQGSIPRGAEKGSVDSYTGRYDYVMKDLMSITNGGSGGNEGPAENEDEDNKSDSPTPKKIKLDSGAVVAVGTASLKECPICSAVFNNNIGLSNHMRTHSTEDSGGGVGGVGGVGGGGGGAAGVSAGSAGGGGVEDNVHDEDDDAADKKPIDPLFKRSLELAADRRFRRMRCRICQKRFSSKKSYRRHMLIDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDEMIVKQYECDICSIVYRTEEQLLVHKKSVHGNESAAAEDDLPPSVDQSMEASIAPVYWYQCRYCPSNFNTNKKLAIHINSHYEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPPVADPSECGICKKIFFDKQMLENHTQSCAQKRAAASAAEAVSTYFQHKTGDDDEVSDKPDTSGVIGEKSTAAMNLKIKLPEVACTICAQKFTDQELFTKHIQMHEMELYTDNPLAAMFDTGPADPNQFYLDRVNDNGQYVCDICSKTFAQMTALKVHRKWHFRGDSKQTPVDSNAPKKTVKRKRELKCDYCPSTFISSNNLRRHIAELHKSEISNWPEPPKIEPEKYLQCTKCNLKFETKKDWIDHKVNEAKVAKPFGPFQWGCEICGVYLSRREKLIHHMLAHIKEINGQLSTGADNYPGESNSQDSESSSHQGAPEQPPADEDEAEEEDEEEEEFEGDEDDAEETVETENHDQNANDGQNESSKLRQRLERESNDDSNDSTTSSESEGSSSDEEDAEGTSLHEETKKRYACDLCQVDFESSSELQKHVTSHFLNGPGSVTLTTITKEKSVPAQIHAKVDDDNNDEDEDDDDDDDDNLTDADPVDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01357261;
90% Identity
iTF_00894192;
80% Identity
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