Basic Information

Gene Symbol
hang
Assembly
GCA_963931855.1
Location
OZ007556.1:60441007-60455867[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.043 11 8.4 1.3 3 23 264 285 263 285 0.93
2 18 0.07 18 7.8 2.6 1 23 459 482 459 482 0.91
3 18 8.8 2.3e+03 1.1 2.1 3 23 523 544 521 544 0.88
4 18 0.0016 0.42 12.9 1.7 2 23 593 615 592 615 0.95
5 18 0.018 4.9 9.6 0.1 1 23 623 646 623 646 0.95
6 18 3e-05 0.0079 18.3 0.1 2 23 743 764 742 764 0.97
7 18 2.1e-05 0.0055 18.8 2.5 2 23 829 851 828 851 0.96
8 18 0.003 0.79 12.1 0.2 2 23 860 882 859 882 0.95
9 18 0.0004 0.1 14.8 0.8 1 23 895 918 895 918 0.97
10 18 0.00034 0.088 15.1 1.0 1 23 947 969 947 969 0.99
11 18 0.0014 0.38 13.1 0.9 1 23 977 1000 977 1000 0.96
12 18 0.088 23 7.4 0.1 2 21 1008 1027 1007 1028 0.91
13 18 0.00021 0.054 15.7 0.4 3 23 1085 1105 1084 1105 0.98
14 18 6.8e-05 0.018 17.2 0.1 1 23 1140 1162 1140 1162 0.98
15 18 6.7e-05 0.018 17.3 0.2 2 23 1188 1210 1187 1210 0.93
16 18 0.032 8.3 8.8 0.3 2 19 1230 1247 1229 1249 0.93
17 18 0.0064 1.7 11.0 0.5 3 23 1265 1285 1265 1285 0.98
18 18 0.002 0.54 12.6 0.1 1 23 1411 1433 1411 1433 0.97

Sequence Information

Coding Sequence
ATGACGGAAGAATCGATACTACGAGCACGTCAGAATTGCTGTCGCTTGTGCTTGGCTCCGGACAGTGAATGTATTTCGATTTTTAACAGCTATGCGGCTGATAAGGAGCCCCTAGCCAACAAAATTCAATCATGTGTCAATATTAAGGTATCACCGATTGATAGGCTCTCCTTGCGTATATGTCACGCTTGTATCAGTTACTTGAATTCATGGCAGAGTTTTAAGAATCGATGTGTGGCTTCGCAGAACAAACAACGCAGCTGGTTGGATATAACGAAGAAGTTTGAAAAGAAACAGCTTAGTGCCGCTGCTCCATTAGCAGGGCTAAGTGCGTGCCATGAAGATGGAAGTGCATCAGCATCAGGCGGAGGAGGAGTAGGTGGCCTCGGAGGACTTGCTGATGaacaagaaaatattaaacttGCTTCCTCGATTCTGGAGGGTATTTCATCGCTCAAGAAAAGACGTTCTCTCACAGTTTAtCCAATTCCTGTGCACATCAAAGATGAGCCAATCGATGAAGAAGAATACGACGCAAAACACGATGAATCGGATATTGATCCGACATTATTTTTGGAACGCACCGAAGAAGAGGGCTCAGATAACTTGTCACAAAAGGAACAACATTTGGCCTCGTTGGGATTGAAACAATCAGCGGGCTCTGTTCATCCGTTGAGTTATTTGgcTGACTATAGTTTTGAAGGCGAAAAGCCTCAACATTCAGCAGCAGATAAACCTCCTGAAATTGCAATTACATCAACGCCAAATAATGAAGTTAAAGAAGCATCATGTCGTGCTTGTAATCTGAAATTTTCCACCCGAGCAAATGCTCGACGTCATGAGCGAAATCTTCATCCTCACCTGTTCTTAGGCGCTCTGCCAGGCAGCATACCAATCAAATCACTAAATGTAATTTCACCAATGACACAAGCTATTGCGGCAAGCGCCCCAATGACACAAACAATACAACCTGCTATAAAATCTGAACAACTTGGTCTCTTTGATTATGACCAGCCGGAAAAATATCAACATCTCCTTAGCGATGATAAGATATTATTCATGCAACGGCAAGAAGATTTCCTTCAGCAATATCAAAACATGACTTGCAACTGCTGCCTTCGCACACATGCTACATATAAAAACTTCATGGCACACATGCGTAAAAAGTATCATTCATTGCCGCGTAATTTATGCTTCAAGTGCTTAAAGCAAAACGATTCCAAGGCGCTCTTTATATCGCATTTAAAAAAACGAAACTGCATTAATCTATATAAGGTCTATCATAGCTTGATTGATGCTGGCGTTCTAAAGAAAGACGCATCTAGCTGCTCTCCGGATAAGCTGCGAGCCAAAGAactacttgtaaataaaatctaCGAATGCAAAATATGCTCCAAGCATTACCGTTTGAAGCTAGAATTTCGTAGTCACGTTTATGAGGAACATGCAGACTACCAAAAGAAAGACGTTTCACCGGGTCATTGTGGATTTTGTGGCTTAGAAATTGAAGATCCGTTTGAAAGAAAGCGCCACTACAACAACATGGATTGCATTGTTATCCTACGATGCATAACATGCGATGAGAAGTTTGATAACCATCAGAAATTCTTAGATCACGTTTATTCGAAGCATTTGGCTAACAACAACGAAACTCAAAAAAGTAACCTTATGAAGGAACTTGCGCCGCCTCTTCCCGCTACTACCTCAACTGAGAGCTCACCTTCGAAGAAATCGGAAACTGCTGTAAAGCCGCAATTCTTTTCACGATTACCTCAGAGCTGCAATATTTGTGGTCAACATTACAACAACTATAACAATGTCTTACGTCACATGGAATCAAAGCATCCAGATCAGTTGCCACAAACATACAAATGCACTCGCTGCTTGGTTGGCTATCCCCGGCTCATGAATCTTCGTGAACACATGATCGAGGTACACGGTATGAAGGTCGATAAAGTGCGTAACAATAGTTTTGACTATATTGTGGACTCGCCCACAGTTCAGGGAAGTATACCTCGGGGAGCCGAAAAGGGGACCGTTGATTCATACACTGGGCGTTATGATTATGTAATGAAAGACCTGATGTCCATAACGAATGGTGGGTCAGGAGGGAATGAGGGTCCGGGAGAAAACGAAGACGAAGATAATAAGTCCGACTCCCCgactccaaaaaaaattaagctcgaAAGTGGTGCAGTTGTGGCAGTTGGCACTGCAAGTTTAAAGGAATGTCCTATATGCAGTGCAGTTTTCAATAACAATATTGGACTTTCGAATCATATGCGAACCCACTCTTCGGAAGATGGCGGCGGAGGTGGTGGTGGAAGTGCAGGTGGTCCTGGTGTCAGTACAAGTAGTGCAGTTGGTGGTGGTGTTGAAGATGATATTCACGACGAAGATGATgatgcaggcgacaagaagtcCATGGATCCACTTTTCAAAAGAAGTCTAGAGTTGGCTGCTGATCGAAGATTCCGAAGAATGCGTTGCCGAATTTGCCAGAAACGATTCTCGTCTAAAAAGAGCTATCGTCGCCACATGTTGATCGACCATCAAATTCGGAATGTTCAGTTCATAAAATGCAAACTTTGTGATGCTGAATTCGCCTACGAAAAGGGCCTTAAAGTACACATGTTCAAAATCCACAACACATTGCTCAAGGACGAAATGATTGTTAAGCAGTACGAATGCGATATCTGTTCGATTGTATATCGGACCGAGGAACAGCTTTTGCACCACAAGAAATCAGTACATGGAAATGAAAGTGCTGCCGCTGAAGAAGACTTGCCGCCCTCAGTAGATCAAAGTATGGAAGCAATTACTGCTCCAGTGTACTGGTATCAATGCCGCTATTGTCCTTCGAActttaatacaaacaaaaaactggcGATTCATATTAATTCCCACTACGAATTCGATTCGAATGACTACTCTTGTAAGGATTGCGGAAACGTATATAGCGGCCGCAAAAGTCTTTGGGTACATCGTTACAAGAAACATCCTCCAGTCGCCGATCCCTCAGAGTGCGTGATTTGCAAGAAAATCTTCTTCGATAAACAAATGCTAGATAATCACGCACAATCTTGTGCTAAGAAGCGTGCGGCAGCTAGTGCTGCCGAAGCCGTACCTACATATTTTCAACATAAAAcaggtgatgatgatgaagtcAATGACAAGCCAGATACATCGGTTTCTGTCGGAGAGAAATCAACTCCTGcggtgaatttaaaaattaaacttcccGAAGTGGCATGTACCATCTGTGCCCAGAAATTCACCGATCAAGAACTCTTCACCAAACACATCCAAATGCACGAGATGGAGTTGTATACCGACAATCCGTTGGCAGCAATGTTTGACACAGGTCCAGCCGATCCAAACCAGTTCTACTTAGATCGAGTAAATGACAACGGGCAATATGTATGTGACATATGCTCGAAGGCGTTCGCACAAATGACAGCGTTGAAGGTTCATCGCAAGTGGCATTTTCGAGGTGATAGCAAACAGacTCCAGTCGATTCAAACGCAGCCAAAAAGACGGTGAAACGCAAGCGTGAACTTAAATGCGACTATTGTCCGTCAACTTTTATTAGCTCAAACAACCTACGACGTCATATAGCCGAGCTGCATAAATCAGAAATTTCCAACTGGCCCGAACCACCTAAAATCGAACCCGAAAAGTACCTCCAATGCACCAAGTGTGACCTGAAATTTGACACGAAAAAAGACTGGATCGACCATAAAGTTAATGAAGCGAAAATTGCCAAACCTTTTGGTCCTTTCCAGTGGGGCTGCGAAATCTGTGGGTTATATTTGTCGCGACGAGAAAAGCTTATACATCACATGTTGGCTCATATCAAAGAAATAAATGGGAAGTTGAGCTCAGAGGCCGACAACTATCCAGGTGAGAGTAATTCGCAGGACTCTGAGTCGTCAAGTCATCAGGGGGCACCCGAACAACCACCAGTTGATGATGATGAACCCGAGGAGGAGGATGAAGAAGAGGAATTTGATGGTGATGAAGATGAAGCCGAAGAAAATGTAGAAACTGAAAATCACGACCAAAATGCAAATGATGGACAAAATGAAAGCTCAAAGTTAAGAGAGCGATTGGAGCGTGAATCGAATGATGAAAGTAACGACTCAACGACAAGCTCTGACTCAGATGGTACTTCTTCGGATGAGGACGATGCAGAAGGAATATCACGACATGAAGAGATCAAAAAACGATACGCCTGCGATTTATGTCAAGTTGACTTTGAGTCCTCAGGCGAACTGCAGAAACATGTCACTAGTCATTTCCTCAATGGGCCAGGTTCAGTCACTCTAACCACAATCACAAAGGAAAAGTCAATACCAACTCAAATACATGCGAAAGTTGATGACGATaacgatgaagaagaagaagatgatgACGAAGATGACGATGACAATTTGACAGATGCAGATCCTGTAGATTCATAA
Protein Sequence
MTEESILRARQNCCRLCLAPDSECISIFNSYAADKEPLANKIQSCVNIKVSPIDRLSLRICHACISYLNSWQSFKNRCVASQNKQRSWLDITKKFEKKQLSAAAPLAGLSACHEDGSASASGGGGVGGLGGLADEQENIKLASSILEGISSLKKRRSLTVYPIPVHIKDEPIDEEEYDAKHDESDIDPTLFLERTEEEGSDNLSQKEQHLASLGLKQSAGSVHPLSYLADYSFEGEKPQHSAADKPPEIAITSTPNNEVKEASCRACNLKFSTRANARRHERNLHPHLFLGALPGSIPIKSLNVISPMTQAIAASAPMTQTIQPAIKSEQLGLFDYDQPEKYQHLLSDDKILFMQRQEDFLQQYQNMTCNCCLRTHATYKNFMAHMRKKYHSLPRNLCFKCLKQNDSKALFISHLKKRNCINLYKVYHSLIDAGVLKKDASSCSPDKLRAKELLVNKIYECKICSKHYRLKLEFRSHVYEEHADYQKKDVSPGHCGFCGLEIEDPFERKRHYNNMDCIVILRCITCDEKFDNHQKFLDHVYSKHLANNNETQKSNLMKELAPPLPATTSTESSPSKKSETAVKPQFFSRLPQSCNICGQHYNNYNNVLRHMESKHPDQLPQTYKCTRCLVGYPRLMNLREHMIEVHGMKVDKVRNNSFDYIVDSPTVQGSIPRGAEKGTVDSYTGRYDYVMKDLMSITNGGSGGNEGPGENEDEDNKSDSPTPKKIKLESGAVVAVGTASLKECPICSAVFNNNIGLSNHMRTHSSEDGGGGGGGSAGGPGVSTSSAVGGGVEDDIHDEDDDAGDKKSMDPLFKRSLELAADRRFRRMRCRICQKRFSSKKSYRRHMLIDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDEMIVKQYECDICSIVYRTEEQLLHHKKSVHGNESAAAEEDLPPSVDQSMEAITAPVYWYQCRYCPSNFNTNKKLAIHINSHYEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPPVADPSECVICKKIFFDKQMLDNHAQSCAKKRAAASAAEAVPTYFQHKTGDDDEVNDKPDTSVSVGEKSTPAVNLKIKLPEVACTICAQKFTDQELFTKHIQMHEMELYTDNPLAAMFDTGPADPNQFYLDRVNDNGQYVCDICSKAFAQMTALKVHRKWHFRGDSKQTPVDSNAAKKTVKRKRELKCDYCPSTFISSNNLRRHIAELHKSEISNWPEPPKIEPEKYLQCTKCDLKFDTKKDWIDHKVNEAKIAKPFGPFQWGCEICGLYLSRREKLIHHMLAHIKEINGKLSSEADNYPGESNSQDSESSSHQGAPEQPPVDDDEPEEEDEEEEFDGDEDEAEENVETENHDQNANDGQNESSKLRERLERESNDESNDSTTSSDSDGTSSDEDDAEGISRHEEIKKRYACDLCQVDFESSGELQKHVTSHFLNGPGSVTLTTITKEKSIPTQIHAKVDDDNDEEEEDDDEDDDDNLTDADPVDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01357261;
90% Identity
iTF_00894192;
80% Identity
-