Basic Information

Insect: Papilio dardanus
Gene Symbol: -
Assembly: GCA_013186455.1
Location: QDHC01000587.1:69212-79688[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0056 0.45 11.2 1.1 2 23 209 231 208 231 0.92

2 23 0.19 15 6.3 0.3 1 22 629 650 629 650 0.95

3 23 3.8 3e+02 2.3 0.3 1 22 692 713 692 715 0.82

4 23 0.0061 0.48 11.1 0.6 3 21 726 744 724 745 0.94

5 23 0.38 30 5.4 0.3 2 23 753 775 752 775 0.89

6 23 0.0061 0.48 11.1 0.1 3 23 796 817 794 817 0.96

7 23 0.0021 0.17 12.5 2.3 1 23 823 846 823 846 0.93

8 23 0.071 5.6 7.7 0.0 1 23 872 895 872 895 0.90

9 23 0.0031 0.25 12.0 3.5 1 23 900 922 900 922 0.97

10 23 0.004 0.32 11.6 0.3 1 23 928 951 928 951 0.95

11 23 0.0013 0.1 13.2 1.3 1 23 965 987 965 987 0.97

12 23 0.0001 0.008 16.7 1.8 1 23 1036 1059 1036 1059 0.97

13 23 0.00087 0.069 13.7 1.5 1 23 1123 1146 1123 1146 0.96

14 23 0.00062 0.049 14.2 2.1 2 23 1170 1192 1169 1192 0.95

15 23 0.049 3.9 8.2 0.1 2 23 1198 1220 1197 1220 0.93

16 23 0.0048 0.38 11.4 0.2 1 21 1263 1283 1263 1284 0.95

17 23 0.00024 0.019 15.5 1.0 1 23 1294 1316 1294 1316 0.93

18 23 5e-05 0.0039 17.6 0.3 2 23 1408 1430 1408 1430 0.93

19 23 6.4e-07 5.1e-05 23.6 1.3 3 23 1437 1457 1436 1457 0.98

20 23 0.031 2.4 8.8 1.4 3 23 1478 1498 1476 1499 0.93

21 23 0.068 5.4 7.8 0.0 1 23 1519 1541 1519 1541 0.97

22 23 0.0031 0.25 12.0 0.4 1 23 1547 1570 1547 1570 0.96

23 23 0.00014 0.011 16.2 0.4 1 23 1578 1601 1578 1601 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0056	0.45	11.2	1.1	2	23	209	231	208	231	0.92
2	23	0.19	15	6.3	0.3	1	22	629	650	629	650	0.95
3	23	3.8	3e+02	2.3	0.3	1	22	692	713	692	715	0.82
4	23	0.0061	0.48	11.1	0.6	3	21	726	744	724	745	0.94
5	23	0.38	30	5.4	0.3	2	23	753	775	752	775	0.89
6	23	0.0061	0.48	11.1	0.1	3	23	796	817	794	817	0.96
7	23	0.0021	0.17	12.5	2.3	1	23	823	846	823	846	0.93
8	23	0.071	5.6	7.7	0.0	1	23	872	895	872	895	0.90
9	23	0.0031	0.25	12.0	3.5	1	23	900	922	900	922	0.97
10	23	0.004	0.32	11.6	0.3	1	23	928	951	928	951	0.95
11	23	0.0013	0.1	13.2	1.3	1	23	965	987	965	987	0.97
12	23	0.0001	0.008	16.7	1.8	1	23	1036	1059	1036	1059	0.97
13	23	0.00087	0.069	13.7	1.5	1	23	1123	1146	1123	1146	0.96
14	23	0.00062	0.049	14.2	2.1	2	23	1170	1192	1169	1192	0.95
15	23	0.049	3.9	8.2	0.1	2	23	1198	1220	1197	1220	0.93
16	23	0.0048	0.38	11.4	0.2	1	21	1263	1283	1263	1284	0.95
17	23	0.00024	0.019	15.5	1.0	1	23	1294	1316	1294	1316	0.93
18	23	5e-05	0.0039	17.6	0.3	2	23	1408	1430	1408	1430	0.93
19	23	6.4e-07	5.1e-05	23.6	1.3	3	23	1437	1457	1436	1457	0.98
20	23	0.031	2.4	8.8	1.4	3	23	1478	1498	1476	1499	0.93
21	23	0.068	5.4	7.8	0.0	1	23	1519	1541	1519	1541	0.97
22	23	0.0031	0.25	12.0	0.4	1	23	1547	1570	1547	1570	0.96
23	23	0.00014	0.011	16.2	0.4	1	23	1578	1601	1578	1601	0.96

Sequence Information

Coding Sequence: atgCGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATATTTCCTAGCACCAGTTCGGATGACTCGGAACCTCCTGGCCTCGCATCAAAAATAAGGGATTGCGTGTCTGTAGAGATAAACGAAGATGACGACCTGCCAACTAACGTTTGCAGAAAATGCTGTGACAATGTCAATAACTGGCACATTTTTAAGGATGTATGTGAAAGGTCACAAAACAAACTACAGAGACTCATTAAAAATGATGGCAGCCAACTAGAAGAGgtgcaaattaaaaatgaaccTTTATCTGATGAGGCATATGATGATGGAGTGGTTATTGCAGGATCTTACCCTGACCTTGAGTGTGCGTCTACATCAAGTAAAGTCCAGCCCGAAGGCCCCCCTATCTTGGCTTCGCTGGGTCTCACACCGAGGAGTGATAAGGGGATGGAGAGCGAAAATAACGAGGAGGAAGACGAAGAAATGAACGAAGAGATGAATGATTCCAGTCAACAATACGCAAGCGTGGCCGCCATGCCCGAGGTGTCCATCACCGTGATGCGGCCCACGGGCGAGACGCTGCACGCGCGCCACGGCATCCACCAGCTCGCCTCCAAGGAGTGCCTCGTCTGCGGACGCTCCTACAGATACTCGCACAACGCGCGTCGACACGAACTCAACGCTCACGGCTTCGACAGATACACCAACAAAGTGACCGCCAAGAAATCACACAATACCCACATGCAACCCAAATTTAGACCCAACCCATTCAATCCCAAAGCTAGGCTCATGCCTAATCCCATTAGTCATAAAATGCAGTTGATCCCTAAAGGGATTAATGCAAAAATCGTACAGAATAAGGCCCTAGCCCCACCCAAACCGATACCGATTAAAACGCCAAAGGGTAACCAAAATAATTTGCCATATCCGCTTCGTATTAAGGCATTAAAAGACttacaaataaagaaaaaggaACCCCAAATTCTTAAGACTTTGTTGACGGCGAAACCGGAAGTCTTGGTATCCGAACCGGAAATTCTTAATTCTGGTCCGGAAAGTCCGGAGACTCTGATATCTGAACCGGAAATAGCTTCGTTTCAGGTAGAGACTATACTTTCGGAACCCGATACTTATATACAACAAGATGATGAAGATGTCGACGGGGAAATGCAGAATAATCAAAGTCAAAATTACGACACCGTTGACATGGATTCCGAAAATGAGATTGAGATAGCCCGTCAAAAAGAAAACTCTATCGAAGGTGAAGGGGATGGTGAGGGTGAGGGCGAGGGCAATGGCGAAGTCGGTGGCGGTGATCATCTGGTGGTTAACGAAGGGGAGGAAGGTCACGAAATggataatgatgatgaaaatAATATGGAAAGAAATCAAAGCGACAATGAAAATTATCAAGCAGATGAAAATGCCGATAGTCAAGACGGCTTACAGGTCGGTAATGAGAACGAAGCCCGCGATGAAGATGATGAGAATGAACATGAAACCAAAGAAGTAGAAGAAGGAAATGATGAACGAGACGAAGATCAGATGGAGTACAATCAAGACGACGATGATGAGGAACTGCCGCCTATTGCACCCGTCGTCGAAATCAACGAAGACATGCAAACAAATTCCTACAACAGCGAAGGAAACGATGAGGATCTCGATGAAACGGCCGATCCTAATGACACAGTCGAGGACGTTAAAGAACTCGATCCTGATAAGCAATATGTGACAAAGACGCAGAGAGATTTTATACACAAGTATCGCGATATTATCCAACAGATTAATACAAAGAGATGTCTCTGTTGCGATAGGGAACATCCCCGCCGCAAAGCTGTCATACAACATTTGCAGAAAAACGGACACAAAGTGCCCAAACACACGTGCTACAACTGCGTCGTTACCTTCGGCCACATCGGCGCTCTGCTCAGTCACATGCGCTCCAACACTTGCACAGATCTatggaaaattatttacaatgaaaatgGCATCACCGAAGATTTAGTTCTCGAAGACGAACCTAAAGATACCAAAGTAgcttataaagatatatttaatgcTAGGTCTTATGCTTGCAAATTGTGTCCGGCTAAATTCCAATTGAAACAGTTTATAATGAAGCACGTGCTCGACGTGCACGAAGACGGGCAGTCCCGCGTGCAGCTCGCCTGCGTGCACTGCAACTCCAGATTCAAAGACAAGGCGCTGTGGAAGAGGCACATCCGCAACGGAGAATGCACCGTTTATATTTCATGCGATTTGTGTTCCGAACGATTTGGTAATATGCAACATTTCAACGATCATGCGCTAGCCGTACACGCCGGCAGCTTCGACCAATCTGATAATCAGAACAAATGTGTCGACGGACGACCGACCGACTGCCCAGTTTGCGGAAAGAAGAACAGCAGCTATCCAAATTTAGTtaagcatttaaaaattattcacaACGAGGAGAAGCCTCATTACTGCCAGCACTGTGATTCTAAATTTGAACAAGCTGCTGATCTAAATAAACACATCTACTTGGAGCATTCTGATAGAACGTTGGGCGTGCAGAGCACCGAGCCCGACATGTCTCTTGTGAAGGAGGAGGCCGAGGAATACCACTACTCGTGCACAGAATGCAACGCCATATTCGAAACTGTCGACGCTTGGACGGATCATCAGGTGGCGGAACACAATCAAGTCGCTCACCACTGCGATCAATGCGACAAGAAGTTTTTAAGGCCGTCGGAGCTGGCGGAGCACAAGAATACGCATTTGAGAGTCAAATTTTATCCTTGCAATATTTGCTCCAATTCGTACAGCACGCCCCAAAAACTATCTGAACACGTTCAGCAAAATCATCCCGGAGCGGCGGGGGCGTACGCGCCCGTGGACTATGACTTCTTCTGCGACATCTGCATCAGGTCGTTCAAAAGCCGCCAGGCCTACTCGAACCACATGCGTATACACGCTAAAGTTCCGACCACGAATAGAAAACCCGGTGAGCCGAAAGGATTCGCTCCGCAGATCGTCGGAAAACCGATTAGATCGTTCTCCATGGTACAACCtagttttctttctttcaaacCAAATTGCAACGTTCCGAATGCGCCTTACTCATGTGATATCTGCGGAAAAGGTTTCATgcacaagaaaaatatttggaaGCACAAAAAAGTGCTGCACGCGGACACAGCGGATCGAAACGACAGCGAGGAGAATACCATGCAGGCCTCCACCGAAGAGGACGAATACAACTTAGACGAAAATGGTGCTCTACTTTCGACGCCGCAATTCAATAGCTTTAACTTTACCAATTTAGCAAACAACTTGCAGCAGCAACAGGCTGCACAGGCCCCCCAGGATGCCACACCTTATTCCTGCGAATTATGCTTCAAACAGTTTCCACTTAAATCAAGTTTATGGAAGCACAAACGCGCCAAGCACGGAATAATCAACGCCAGCGCCAGCGGTAACTCAGATTCACCAATGACTGCCGGTGAAGGCGGCAGGTCAAGTTGCACTATTtgcaaaattactttttcagACAAAAAATCTTACTACCGCCACAGAAAGAACGTCCACAAATCCTCGGCGCAAATGTGCAAAATATGCGGAAAGCCATTAAATTCGACGTTAGAATTGTATGAGCATCTTAAAGCTGCCCATGCCAGGGAgctactcgggtataatgcgAGTCAAGGTCCCGCTAAACAGGAGGTCACCCAAGAATTGGAGGCGGATTATGACGGTGACCAGGATTCAGTCGACCCAAGTGCGGATTATCAAGCTCGCTACCCGTGTGACAACTGTGGTAAACAATTTGTCGGCTTGCTCGCGTTACAGAACCACCAATGCGTAAACCAACTCCAATCATCTTCACAAACCTTCGACTGTGAAATATGCCACAAAAGTTACACCTCTATTTCTGCGCTAAAGAGCCACCGCGGATGGCATTTGCGCTCCCCGGATGGCAAAGCGGCCGCCAATAATTCGGGCCTGTGGATGCCTCAGCACAAAGTCACCAGCAAGGTCAGCAAGCACGAGGTGGTCGATCCGTCGCAGCTCGCGCGCGTCACTCATTCGACGCCGACGCCCGCCAGCGTCGCCAAGAGGAGACTGCCACCGGAAGTCGAAGTCACAGTCGTAAATCCCAACAAGAAGTTGCGTTCCGACGATTCCGTGGAATTGGAACAACACAACAATTCCTCGGCCGGGCCCGACGATAGATACTGCAACATATGCGACAAAGAGTTCACCAAGCGAGCGGCGTACCAGCGACACATGGACGAGGTGCACCAGCCCAACTCCGTGTTCTGTCCCGTCTGCGAGAAGAGCTTCACGCGCAAGTCGACGTTACTCGTCCATATGAAGAAACATTACGGCGGCGGCGAGGGCAGCTCGGCGGCCGTGGACCACAACGAGGACGATGGCCTCGCCTGCGACGTTTGCGGCGTTCACTGCGACAACGAGAACGCTCTAAGAGCCCACCAGGTGATGCACCACGGTGATGAATCGGAGGAGTCGGAAGAAGAGGGTGGCGGGGCGCCGCCGCCGGGCGAGTTCACGTGCGGCCAGTGCGGGGACGGCGTGGCGACGCCGCGCGACCTGATCGCCCACCGCACCATGCACGCCACGCCCACCAAGTTCTACTGTAACATTTGCAAGGTGTACTTCGCGCGCGCCATCGACCTGTCGTCGCACACGCGCGCGCGTCACTCCGACAACGAGAAGGTGTTCTTCCCGTGCGCGATGTGCGACAGGTTTTACATGAACAAGAAGAGTTTGCAGCGGCATATCGAGATGGCGCACTGA
Protein Sequence: MRVNYDRVCRLCLSSRGELLPIFPSTSSDDSEPPGLASKIRDCVSVEINEDDDLPTNVCRKCCDNVNNWHIFKDVCERSQNKLQRLIKNDGSQLEEVQIKNEPLSDEAYDDGVVIAGSYPDLECASTSSKVQPEGPPILASLGLTPRSDKGMESENNEEEDEEMNEEMNDSSQQYASVAAMPEVSITVMRPTGETLHARHGIHQLASKECLVCGRSYRYSHNARRHELNAHGFDRYTNKVTAKKSHNTHMQPKFRPNPFNPKARLMPNPISHKMQLIPKGINAKIVQNKALAPPKPIPIKTPKGNQNNLPYPLRIKALKDLQIKKKEPQILKTLLTAKPEVLVSEPEILNSGPESPETLISEPEIASFQVETILSEPDTYIQQDDEDVDGEMQNNQSQNYDTVDMDSENEIEIARQKENSIEGEGDGEGEGEGNGEVGGGDHLVVNEGEEGHEMDNDDENNMERNQSDNENYQADENADSQDGLQVGNENEARDEDDENEHETKEVEEGNDERDEDQMEYNQDDDDEELPPIAPVVEINEDMQTNSYNSEGNDEDLDETADPNDTVEDVKELDPDKQYVTKTQRDFIHKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNTCTDLWKIIYNENGITEDLVLEDEPKDTKVAYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVQLACVHCNSRFKDKALWKRHIRNGECTVYISCDLCSERFGNMQHFNDHALAVHAGSFDQSDNQNKCVDGRPTDCPVCGKKNSSYPNLVKHLKIIHNEEKPHYCQHCDSKFEQAADLNKHIYLEHSDRTLGVQSTEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCNICSNSYSTPQKLSEHVQQNHPGAAGAYAPVDYDFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFAPQIVGKPIRSFSMVQPSFLSFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADTADRNDSEENTMQASTEEDEYNLDENGALLSTPQFNSFNFTNLANNLQQQQAAQAPQDATPYSCELCFKQFPLKSSLWKHKRAKHGIINASASGNSDSPMTAGEGGRSSCTICKITFSDKKSYYRHRKNVHKSSAQMCKICGKPLNSTLELYEHLKAAHARELLGYNASQGPAKQEVTQELEADYDGDQDSVDPSADYQARYPCDNCGKQFVGLLALQNHQCVNQLQSSSQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDPSQLARVTHSTPTPASVAKRRLPPEVEVTVVNPNKKLRSDDSVELEQHNNSSAGPDDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCEKSFTRKSTLLVHMKKHYGGGEGSSAAVDHNEDDGLACDVCGVHCDNENALRAHQVMHHGDESEESEEEGGGAPPPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFYCNICKVYFARAIDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01141080;
90% Identity: iTF_01144706; iTF_01142543; iTF_01141080; iTF_01148254; iTF_01149759; iTF_01145413; iTF_01147532; iTF_01146661; iTF_01143991; iTF_01139097; iTF_01148988;
80% Identity: -