Basic Information

Insect: Papilio helenus
Gene Symbol: -
Assembly: GCA_026546675.1
Location: JAOCNA010000027.1:2925580-2933911[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.024 4.3 9.2 1.3 2 23 209 231 208 231 0.92

2 23 0.2 35 6.3 0.3 1 22 633 654 633 654 0.95

3 23 3.9 6.9e+02 2.3 0.3 1 22 696 717 696 719 0.82

4 23 0.0037 0.67 11.8 0.6 2 21 729 748 728 749 0.94

5 23 0.39 69 5.4 0.3 2 23 757 779 756 779 0.89

6 23 0.0044 0.78 11.5 0.1 3 23 800 821 798 821 0.96

7 23 0.0055 0.97 11.2 3.5 1 23 827 850 827 850 0.95

8 23 0.073 13 7.7 0.0 1 23 876 899 876 899 0.90

9 23 0.0032 0.56 12.0 3.5 1 23 904 926 904 926 0.97

10 23 0.0028 0.49 12.2 1.1 1 23 932 954 932 955 0.95

11 23 0.0013 0.24 13.2 1.3 1 23 969 991 969 991 0.97

12 23 0.0001 0.018 16.7 1.8 1 23 1040 1063 1040 1063 0.97

13 23 0.0033 0.59 11.9 1.8 1 23 1128 1151 1128 1151 0.96

14 23 0.00064 0.11 14.2 2.1 2 23 1175 1197 1174 1197 0.95

15 23 0.05 8.9 8.2 0.1 2 23 1203 1225 1202 1225 0.93

16 23 0.00047 0.084 14.6 0.4 1 23 1268 1290 1268 1290 0.98

17 23 0.00024 0.043 15.5 1.0 1 23 1299 1321 1299 1321 0.93

18 23 5.1e-05 0.0091 17.6 0.3 2 23 1415 1437 1415 1437 0.93

19 23 3.6e-07 6.3e-05 24.4 1.1 3 23 1444 1464 1443 1464 0.98

20 23 0.0067 1.2 11.0 0.1 3 23 1485 1505 1483 1506 0.94

21 23 0.07 12 7.8 0.0 1 23 1526 1548 1526 1548 0.97

22 23 0.0032 0.56 12.0 0.4 1 23 1554 1577 1554 1577 0.96

23 23 0.00015 0.026 16.2 0.4 1 23 1585 1608 1585 1608 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.024	4.3	9.2	1.3	2	23	209	231	208	231	0.92
2	23	0.2	35	6.3	0.3	1	22	633	654	633	654	0.95
3	23	3.9	6.9e+02	2.3	0.3	1	22	696	717	696	719	0.82
4	23	0.0037	0.67	11.8	0.6	2	21	729	748	728	749	0.94
5	23	0.39	69	5.4	0.3	2	23	757	779	756	779	0.89
6	23	0.0044	0.78	11.5	0.1	3	23	800	821	798	821	0.96
7	23	0.0055	0.97	11.2	3.5	1	23	827	850	827	850	0.95
8	23	0.073	13	7.7	0.0	1	23	876	899	876	899	0.90
9	23	0.0032	0.56	12.0	3.5	1	23	904	926	904	926	0.97
10	23	0.0028	0.49	12.2	1.1	1	23	932	954	932	955	0.95
11	23	0.0013	0.24	13.2	1.3	1	23	969	991	969	991	0.97
12	23	0.0001	0.018	16.7	1.8	1	23	1040	1063	1040	1063	0.97
13	23	0.0033	0.59	11.9	1.8	1	23	1128	1151	1128	1151	0.96
14	23	0.00064	0.11	14.2	2.1	2	23	1175	1197	1174	1197	0.95
15	23	0.05	8.9	8.2	0.1	2	23	1203	1225	1202	1225	0.93
16	23	0.00047	0.084	14.6	0.4	1	23	1268	1290	1268	1290	0.98
17	23	0.00024	0.043	15.5	1.0	1	23	1299	1321	1299	1321	0.93
18	23	5.1e-05	0.0091	17.6	0.3	2	23	1415	1437	1415	1437	0.93
19	23	3.6e-07	6.3e-05	24.4	1.1	3	23	1444	1464	1443	1464	0.98
20	23	0.0067	1.2	11.0	0.1	3	23	1485	1505	1483	1506	0.94
21	23	0.07	12	7.8	0.0	1	23	1526	1548	1526	1548	0.97
22	23	0.0032	0.56	12.0	0.4	1	23	1554	1577	1554	1577	0.96
23	23	0.00015	0.026	16.2	0.4	1	23	1585	1608	1585	1608	0.96

Sequence Information

Coding Sequence: ATGCGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAGTTACTGCCGATATTTCCTACCACCAGTTCGGATGACTCGGAACCTCCTGGCCTCGTAACAAAAATCAGGGAATGCGTGTCTGTAGAGATAAACGAAGATGACGACCTGCCAACTAATGTTTGCAGAAAATGCTGTGACAATGTCAATAACTGGCACATTTTTAAGGATGTATGTGAAAGGTCACAAAACAAACTACAGAAACTCATTAAAAATGATGGCAGCCAACTAGAAGAGGTGCAAATTAAAAGTGAACCATTATCTGATGAGGCTTATGATGATGGAGTTGTTATTGAAGGATCATACCCTGACCTTGAGTGTGCATCAACATCAAGTAAAGTACAACCAGAAGGCCCTCCTATCTTGGCTTCACTGGGTCTCACACCACGGAGTGATAAGGGTATGGAGAGCGAAAATAATGAGGAAGAAGATGAAGATATGAATGAAGAGATTAATGAGCCTGCGCAACAATATCCGGGCGTGCCCGCCATGCCCGAGGTGTCTATCACCGTGATGCGCCCCACAGGAGAGACGCTGCACGCTCGCCAAGGGATACAACAACTCGCGTCCAAAGAATGCCTCGTTTGCGGAAGATTTTACAGATATTCACATAACGCCAGGCGACATGAACTTAACGCTCACAGTTTTGACAGATACACTAACAAAGTAACCAACAAGAAATCGCACAATACACACATGCAGCCGAAACTTAGACCCAATCCGTTCAATCCCAAAGCGAGGCTCATGCCAAATCCTATTAGTCATAAAATGCAGTTGATCCCTAAAGGGATTAATGCAAAAATCATACAAAACAAGCCTTCCGCCCAACCCAAACCTATACCAATTAAAACACCAAAGGGAACCCAAAACAATTTGCCATACCCGCTTCGTATTAAGGCATTAAAAGATTTACAGATAAAGAAAAAGGAACCACAAATCCTTAAGACTCTGTTGACAACGAAACCTGAAGTTTTGGTATCCGAACCGGAAATTCTAAATTCTGGTCCAGAAAGTCCGGAGACTTTGATATCTGAACCAGAAATAGCTTCGTTTCAAGTAGAGACTATCCTTTCGGAACCGGATACATATATGCCACAAGATGATGATGATGTCGATGGTGAAATGCAAAATAATCAAGGTCATAATTACGATACTGTTGACATGGACTCCGAAAATGAGATTGAGATAGCTCGTCAAAAAGAAAACGTCGAAGGTGATGAGGATGGGGAAGGTGAAGGGGATGGGGAAGGTGAAGGGGATGGGGATGGTGAGGGCGGTGTGGGTGATCATTTAGTCATTAACGAAAGGGAGGAAGGTAACGAAATGGATAATGACGATGAAAATAACATGGAAAGAAATAGCGACAATGAAAATGATCACGCAGATGACAATGCCGATAGCCAGGATGGGTTACAAATCGACAACGAGAATGATGGCAGAGACGAAGATTATGAGAATGGACATGAAACCAAAGAGGGCGAAGAAGGTATTGATGAACGAGACGATGAACAGATGGAATACAATCAAGATGACGATGATGAGGAACTGCCTCCTATAGCACCCGTTGTCGAAATCAACGAAGACATGCAGACAAATTCGTACATCAGTGAAGGGAACGATGAAGATCTCGACGAAACCGCTGACCCTAACGACACAGTGGAGGACGTCAAAGAACTCGACCCTGATAAACTGTATGTGACAAAGACACAGCGAGATTTTATACAAAAATATCGCGATATAATTGAACAGATTAATACAAAAAGATGTCTCTGTTGTGATAGGGAACATCCCCGCCGCAAAGCAGTCATACAACATTTGCAAAAAAATGGACACAAAGTCCCCAAACACACGTGCTACAACTGCGTTGTTACCTTTGGCCATATCGGCGCACTGCTCAGTCACATGCGCTCCAATACTTGCACAGATCTATGGAAGATTATTTACAATGAAAATGGCATCACCGAAGATTTAGTTCTGGAGGACGAACCTAAAGATACCAAAGTAGCCTATAAAGATATATTTAATGCTAGGTCTTATGCTTGCAAATTGTGTCCGGCTAAATTCCAATTGAAACAGTTTATTATGAAACATGTGCTGGACGTGCATGAAGATGGCCAGTCTCGCGTACAGCTCGTCTGCGTCCACTGCAACTCGAGATTCAAAGATAAGGCGTTGTGGAAGAGGCACATCCGCAACGGAGAATGTACCGTTTATATTTCATGCGATTTGTGTTCCGAAAGATTTGGCAATATGCAACATTTCAACGACCACGCATTAGCCGTACACGCCGGGAACTTCGACCAATCTGATAATCAGAACAAATGTGTCGACGGACGTCCGACCGATTGTCCAGTTTGCGGGAAGAAGAACAGTACCTATCCAAATTTAGTGAAACATTTAAAGATTATTCACAACGAGGAGAAACCTCATTACTGCCAGCATTGCGATTCTAAATTTGAACAAACTGCTGATCTAAATAAACACATCTATATGGAACATTCTGATAGAACGTTAGGCGTCCAGAGCAACGAGCCCGACATGTCTCTCGTGAAGGAGGAAGCCGAGGAATACCACTACTCTTGCACAGAATGTAACGCCATATTCGAAACTGTCGACGCTTGGACGGATCATCAGGTGGCCGAACATAATCAAGTCGCTCACCATTGCGACCAATGCGACAAGAAATTTTTAAGGCCGTCGGAACTGGCGGAGCACAAGAATACGCATTTGAGAGTTAAATTTTATCCTTGCAATATTTGTTCCAATTCGTACAGCACACCCCAAAAACTTTCTGAACACGTTCAGCAACACCATCCCGGAGCCGCGGGGGCGTACGCGCCCGTGGACTACGACTTCTTCTGCGACATCTGCATTCGGTCGTTCAAAAGCCGCCAGGCATACTCGAACCACATGCGCATACACGCCAAAGTACCCACCACAAATAGAAAACCCGGAGAACCGAAAGGATTCGCTCCGCAAATTGTCGGTAAACCGATTAGATCCTTCTCGATGGTACAACCCAATTTTCTTCCATTCAAACCCAATTGTAACGTCCCGAATGCGCCTTACTCCTGTGATATCTGCGGAAAAGGTTTCATGCACAAGAAAAATATTTGGAAGCACAAGAAAGTGCTACATGCAGACGCCGCGGAACGAAACGACAGCGAGGAGAACACCATGCAGGCCTCCACCGAAGAGGACGAATACAATTTAGACGAAAACGGAGCTGTACTTTCGACGCCGCAATTCAATAGTTTTAACTTTACTAATTTAGCAAACAACTTGCAGCAACAGGCCGCACAGCAGCAGCCCCCCCAGGACGCCACACCTTATTCTTGCGAATTATGCTTCAAAAAGTTTCCACTTAGAACAAGTTTATGGAAACACAAACGCGCTAAGCACGGAATCATCAACGCCAGCGCCAGCGGCAGCTCAGATTCACCCATAATGGCCGGAGAAGGCGGCAGATCGAGTTGCACTATATGTAAAATTACTTTTTCAGACAAAAAATCGTACTACCGTCACAGAAAGAATGTTCACAAATCCTCTGCGCAAATGTGCAAAATATGCGGAAAACCATTGAATTCTACGTTAGAATTATACGAGCATCTCAAGGCCGCTCATGCCAGGGAATTACTCGGATATAACGCAAGTCAAGTTCCCACTAAACAGGAGCCTACCCAAGAATTGGAAGGGGAATATGACGGTGACCAGGATTCGGTCGACCCCAGTGCGGAATATCAAGCCCGCTACCCGTGCGACAACTGCGGCAAACAATTCGTCGGCTTGCTCGCTTTACAGAACCACCAATGCATACACCAGGTACAATCATCTCCTCAGACTTTCGACTGTGAAATATGTCATAAGAGTTACACTTCTATTTCGGCGCTAAAGAGTCACCGCGGCTGGCATCTACGTTCCCCGGACGGCAAAGCGGCTGCCAACAATTCGGGGCTTTGGATGCCTCAGCATAAAGTTACCAGCAAGGTCAGTAAGCACGAGGTGGTCGACCCCTCACAGCTCGCGCGCGTCACTCATTCGACGCCGACGCCGACGCCCGCCAGCGTCGCTAAAAGGAGACTGCCGCCGGAAGTCGAGGTCACCGTCGTGAATCCCAACAAGAAGTTGCGTTCCGACGATTCGGTGGAATTGGAACAACAAAACAATTCCTCCACCGGGACCGACGATAGATACTGCAACATATGTGACAAGGAGTTCACCAAGCGAGCGGCCTACCAGCGGCACATGGACGAGGTGCACCAGCCTAACTCCGTGTTCTGTCCCGTCTGCGAGAAGAGTTTCACGCGCAAGTCGACGTTGATCGTTCACATGAAGAAACATTACGGTGGCGGCGAAGGCAGCTCCACCAGCGTCGACCAGAACGAAGATGACGGTCTCGCGTGCGACATTTGCGGGGCGCAGTACGATAACGAGAACGCTCTAAGAGCCCACCGAGCTATGCACCACGGCGATGATTCGGGAGAGTCTGAAGACGAGGGCAACAGCGCGCCGCCCCCGGGCGAGTTCACTTGCGGGCAGTGCGGGGACGGAGTGGCGACGCCGCGCGACCTCATCGCCCATCGTACTATGCACGCCACGCCTACCAAGTTCTATTGTAACATCTGCAAGGTGTACTTCGCACGCGCCATCGACCTGTCATCGCACACACGCGCGCGTCACTCTGACAATGAGAAGGTGTTCTTCCCGTGTGCGATGTGCGACAGGTTCTACATGAACAAGAAGAGTTTGCAGCGGCACATCGAGATGGCCCACTGA
Protein Sequence: MRVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPGLVTKIRECVSVEINEDDDLPTNVCRKCCDNVNNWHIFKDVCERSQNKLQKLIKNDGSQLEEVQIKSEPLSDEAYDDGVVIEGSYPDLECASTSSKVQPEGPPILASLGLTPRSDKGMESENNEEEDEDMNEEINEPAQQYPGVPAMPEVSITVMRPTGETLHARQGIQQLASKECLVCGRFYRYSHNARRHELNAHSFDRYTNKVTNKKSHNTHMQPKLRPNPFNPKARLMPNPISHKMQLIPKGINAKIIQNKPSAQPKPIPIKTPKGTQNNLPYPLRIKALKDLQIKKKEPQILKTLLTTKPEVLVSEPEILNSGPESPETLISEPEIASFQVETILSEPDTYMPQDDDDVDGEMQNNQGHNYDTVDMDSENEIEIARQKENVEGDEDGEGEGDGEGEGDGDGEGGVGDHLVINEREEGNEMDNDDENNMERNSDNENDHADDNADSQDGLQIDNENDGRDEDYENGHETKEGEEGIDERDDEQMEYNQDDDDEELPPIAPVVEINEDMQTNSYISEGNDEDLDETADPNDTVEDVKELDPDKLYVTKTQRDFIQKYRDIIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNTCTDLWKIIYNENGITEDLVLEDEPKDTKVAYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVQLVCVHCNSRFKDKALWKRHIRNGECTVYISCDLCSERFGNMQHFNDHALAVHAGNFDQSDNQNKCVDGRPTDCPVCGKKNSTYPNLVKHLKIIHNEEKPHYCQHCDSKFEQTADLNKHIYMEHSDRTLGVQSNEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCNICSNSYSTPQKLSEHVQQHHPGAAGAYAPVDYDFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFAPQIVGKPIRSFSMVQPNFLPFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADAAERNDSEENTMQASTEEDEYNLDENGAVLSTPQFNSFNFTNLANNLQQQAAQQQPPQDATPYSCELCFKKFPLRTSLWKHKRAKHGIINASASGSSDSPIMAGEGGRSSCTICKITFSDKKSYYRHRKNVHKSSAQMCKICGKPLNSTLELYEHLKAAHARELLGYNASQVPTKQEPTQELEGEYDGDQDSVDPSAEYQARYPCDNCGKQFVGLLALQNHQCIHQVQSSPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDPSQLARVTHSTPTPTPASVAKRRLPPEVEVTVVNPNKKLRSDDSVELEQQNNSSTGTDDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCEKSFTRKSTLIVHMKKHYGGGEGSSTSVDQNEDDGLACDICGAQYDNENALRAHRAMHHGDDSGESEDEGNSAPPPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFYCNICKVYFARAIDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01141080;
90% Identity: iTF_01140354;
80% Identity: -