Basic Information

Insect: Papilio demoleus
Gene Symbol: -
Assembly: GCA_029286655.1
Location: JAGSMY010000016.1:7452862-7461062[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0068 0.66 11.1 1.1 2 23 297 319 296 319 0.92

2 23 0.23 23 6.3 0.3 1 22 714 735 714 735 0.95

3 23 4.6 4.4e+02 2.2 0.3 1 22 777 798 777 800 0.82

4 23 0.0044 0.43 11.7 0.6 2 21 810 829 809 830 0.94

5 23 0.46 44 5.3 0.3 2 23 838 860 837 860 0.89

6 23 0.0074 0.72 11.0 0.1 3 23 881 902 879 902 0.96

7 23 0.0052 0.51 11.5 2.4 1 23 908 931 908 931 0.95

8 23 0.086 8.3 7.6 0.0 1 23 957 980 957 980 0.90

9 23 0.0038 0.36 11.9 3.5 1 23 985 1007 985 1007 0.97

10 23 0.0049 0.47 11.6 0.3 1 23 1013 1036 1013 1036 0.95

11 23 0.0016 0.15 13.1 1.3 1 23 1050 1072 1050 1072 0.97

12 23 0.00012 0.012 16.6 1.8 1 23 1121 1144 1121 1144 0.97

13 23 0.0033 0.32 12.1 1.7 1 23 1207 1230 1207 1230 0.96

14 23 0.0017 0.17 13.0 1.4 2 23 1254 1276 1253 1276 0.95

15 23 0.06 5.8 8.1 0.1 2 23 1282 1304 1281 1304 0.93

16 23 0.0058 0.56 11.3 0.2 1 21 1347 1367 1347 1368 0.95

17 23 0.00029 0.028 15.4 1.0 1 23 1378 1400 1378 1400 0.93

18 23 6e-05 0.0058 17.6 0.3 2 23 1492 1514 1492 1514 0.93

19 23 4.2e-07 4.1e-05 24.3 1.1 3 23 1521 1541 1520 1541 0.98

20 23 0.0079 0.77 10.9 0.1 3 23 1562 1582 1560 1583 0.94

21 23 0.083 8 7.7 0.0 1 23 1603 1625 1603 1625 0.97

22 23 0.0038 0.36 11.9 0.4 1 23 1631 1654 1631 1654 0.96

23 23 0.00017 0.017 16.1 0.4 1 23 1662 1685 1662 1685 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0068	0.66	11.1	1.1	2	23	297	319	296	319	0.92
2	23	0.23	23	6.3	0.3	1	22	714	735	714	735	0.95
3	23	4.6	4.4e+02	2.2	0.3	1	22	777	798	777	800	0.82
4	23	0.0044	0.43	11.7	0.6	2	21	810	829	809	830	0.94
5	23	0.46	44	5.3	0.3	2	23	838	860	837	860	0.89
6	23	0.0074	0.72	11.0	0.1	3	23	881	902	879	902	0.96
7	23	0.0052	0.51	11.5	2.4	1	23	908	931	908	931	0.95
8	23	0.086	8.3	7.6	0.0	1	23	957	980	957	980	0.90
9	23	0.0038	0.36	11.9	3.5	1	23	985	1007	985	1007	0.97
10	23	0.0049	0.47	11.6	0.3	1	23	1013	1036	1013	1036	0.95
11	23	0.0016	0.15	13.1	1.3	1	23	1050	1072	1050	1072	0.97
12	23	0.00012	0.012	16.6	1.8	1	23	1121	1144	1121	1144	0.97
13	23	0.0033	0.32	12.1	1.7	1	23	1207	1230	1207	1230	0.96
14	23	0.0017	0.17	13.0	1.4	2	23	1254	1276	1253	1276	0.95
15	23	0.06	5.8	8.1	0.1	2	23	1282	1304	1281	1304	0.93
16	23	0.0058	0.56	11.3	0.2	1	21	1347	1367	1347	1368	0.95
17	23	0.00029	0.028	15.4	1.0	1	23	1378	1400	1378	1400	0.93
18	23	6e-05	0.0058	17.6	0.3	2	23	1492	1514	1492	1514	0.93
19	23	4.2e-07	4.1e-05	24.3	1.1	3	23	1521	1541	1520	1541	0.98
20	23	0.0079	0.77	10.9	0.1	3	23	1562	1582	1560	1583	0.94
21	23	0.083	8	7.7	0.0	1	23	1603	1625	1603	1625	0.97
22	23	0.0038	0.36	11.9	0.4	1	23	1631	1654	1631	1654	0.96
23	23	0.00017	0.017	16.1	0.4	1	23	1662	1685	1662	1685	0.96

Sequence Information

Coding Sequence: atgcGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATATTTCCTACCACCAGTTCGGATGACTCGGAACCTCCTGGCCTCGCATCAAAAATCAGGGATTGTGTGTCTGTAGAGataaatGAAGATGACGACCTGCCAACTAATGTTTGCAGAAAATGCTATGACAATGTCAATAACTGGCACATTTTTAAGGATGTATGTGAAAGGTCACAAAACAAACTACAGAGGCTCATTAAAAATGATGGCAGCCAACTAGAAGAGGTGCAAATTAAAAGTGAACCTTTATCTGATGAGGCATATGATGATGGAGTGGTTATTGAAGGATCATATCCTGACCTTGAGTGTGCATCAACATCAAGTAAATTACAACCAGAAGGCCCTCCTATCTTGGCTTCGCTGGGTCTCACACCGAGGAGTGATAAgAATAATGTAGATCCACGGATGGACTGGCAAAGGGTACATGCAATATTGGATCTGGTTCAAAAAGATGATGTCATTGACTCTCTGCAGTCTGCTGAAGAATGTGATATGTTACATCACTCTGATCATGACTCTGACTCTGAAACCGAATTGAATTCTAACACAAGTCCAAAATACTTTGTGAATAGTGAAAATGGTTACTTGTGTAGAAATGAACAAGTTATATCAAAAATACCTTTAACACCAAGAAAATGCAATGACAAAGGGATGGAGAGCGAAAATAATGAGGAGGAAGATGAAGAAATGAATGAAGAAGAGATGAATGATTCCAGTCAACAATATCCAAGCATGCCCGCTATGCCTGAGGTCTCTATCACCGTGATGCGGCCCACGGGGGAGACGCTGCACGCTCGCCAAGGCATACAACAGCTCGCTTCCAAAGAATGTCTCGTGTGCGGACGATCTTACAGATACTCACATAACGCCAGGCGACATGAACTTAATGCTCACAGTTTTGACAGATACACAAACAAAGTAACCACCAAGAAATCTCACAATACACACATGCAGCCTAAACTTAGACCCAATCCATTCAATCCCAAAGCAAGGCTCATGCCAAATCCTATTAGTCATAAAATGCAGTTAATTCCTAAAGGAATTAATGcaaaaatcatacaaaataaGTCAGTCGCCCCACCAAAACCGATACCAGTCAAAACACCAAAGGGAACCCAAAATAATTTACCATATCCGCTTCGTATTAAAGCATTAAAAgatttacaaataaagaaGAAGGAACCGCAAATTCTAAAGACTTTGCTAACAACGAAACCTGAAGTTTTGGTATCTGAACCGGAAATTCTTAATTCTGGTCCAGAAAGTCCAGAGACTTTGATATCTGAACCAGAAATAGCCTCGTTTCAGGTAGAGACCATACTTTCGGAACCCGATACTTATATTCAACAAGATGACGAAGATGTTGATGGTGAAAATCATCAAGGTCAAAATTACGATACCGTTGATATGGATTCCGAAAATGAGATTGAAATAGCTCGTCAGAAAGAAAATGCTGTTGATGGTGAAGGAGATGGTGAAGATGAGGGCGAAGGTGATGGCGAAGGCCCAGGCGATCACCTGGTAATAAATGAAGGGGAGGAAGGTAACGATATGGACAATGATGATGAGAATAATATGGAAAGAAATCAAAGTGACAATGAACATTATCAAGCGGATGAAAACGCCGATAGCCAAGATGGGTTACAAGTGGGCAACGAGAACGATGGCAGAGATGAGGATGAAGAGAATGAACATGAAACCAAAGAAGGTGAAGAAGGAAATGATGAACGAGACGATGAACAGATGGAGTATAATCAAGAAGATGATGATGAGGATCTACCGCCGATTGCGCCCGTCGTTGAAATCAACGAAGACTTGCAAACAAATTCGTACAACAGCGAAGGAAATGATGAAGATCTCGATGAAACAGCGGACCCTAACGACACAGCAGAGAACGTCAAGGAACTGGATCCTGATAAACTGTATGTGACAAAGACACAGAGAGATTTCATACTGAAATATCGTGATATAAtagaacaaattaatacaaaaagatGTCTCTGTTGTGATAGGGAACATCCTCGTCGCAAAGCTGTCATACAACATTTACAGAAAAATGGACACAAAGTTCCTAAACACACGTGCTACAACTGTGTTGTTACATTTGGTCACATCGGTGCCCTGCTCAGTCACATGCGCTCCAACACTTGTACAGATCTGTGGAAGATTATATACAATGAAAATGGCATCACGGAAGATTTAGTTCTGGAGGACGAACCTAAAGATACCAAAGTAgcatataaagatatattcaATGCTAGGTCTTATGCTTGCAAATTGTGTCCTGCCAAATTCCAATTGAAACAGTTTATTATGAAACACGTGCTAGACGTTCACGAAGACGGCCAGTCTCGCGTGCAGCTCGTCTGTGTTCACTGCAACTCGAGATTCAAAGATAAGGCATTGTGGAAGAGGCACATACGCAACGGTGAATGCACCGTGTATATTTCATGCGATTTGTGTTCCGAAAGATTCGGCAACATGCAACATTTCAACGACCACGCATTAGCGGTACACGCCGGGAGCTTCGACCAATCTGATAATCAGAACAAATGTGTCGACGGACGACCGACCGACTGTCCGGTTTGCGGGAAGAAGAACAGCAGCTATCCAAATTTAGTGAaacatttaaagattattcACAACGAGGAGAAACCTCATTACTGCCAGCATTGTGATTCTAAATATGAACAAGCTGCTGACCTTAATAAACACATCTATATGGAACATTCTGACAGAACCTTGGGAGTGCAGAGCAGCGAGCCCGACATGTCTCTTGTGAAGGAGGAAGCCGAAGAATACCACTACTCCTGCACAGAATGTAACGCCATATTCGAAACTGTCGACGCTTGGACGGATCATCAGGTGGCCGAACATAATCAAGTAGCTCACCACTGCGACCAATGTGACAAAAAATTCTTAAGACCGTCGGAACTGGCGGAGCACAAGAATACACATTTGAGAGTCAAATTTTATCCTTGCAACATTTGTTCCAATTCGTACAGCACGCCCCAGAAACTTTCTGAGCACGTTCAACAAAACCATCCCGGAGCCGCGGGAGCGTATGTGCCAATGGACTATGACTTCTTCTGTGACATCTGCATCAGGTCGTTCAAAAGCCGGCAGGCCTACTCGAACCACATGCGCATACACGCTAAAGTACCCACCACGAATAGAAAACCCGGTGAGACGAAAGGATTCGCTCCACAAATTGTCGGTAAACCGATTAGATCCTTTTCCGTGGTACAACCCAGCTTCCTTCCTTTTAAACCTAATTGTAATGTTCCAAATGCGCCTTACTCATGCGATATCTGCGGAAAAGGTTTCATgcacaagaaaaatatttggaaGCACAAAAAAGTTCTGCACGCGGACACCGCGGACCGAAATGACAGCGAGGAAAACACCATGCAAGCTTCCACCGAGGAGGACGAATATAATTTAGACGAAAATGGTTCCGTACTCTCGACGCCGCAGTTCAATagctttaattttactaatttaacaaACAACTTGCAGCAACAGGCCGCACAACCCGCGCAGGATGTCACACCTTATTCTTGCGAGTTATGCTTCAAACGGTTCCCGCTTAGAACAAGTTTATGGAAGCATAAACGCGCCAAACATGGAATTATCAACGCAAGCGCCAGTGGTAGCTCAGATTCAACTGTAATGGCCGGAGAAGGCGGCAGATCGAGTTGcactatttgtaaaattacttttgcaGACAAAAGATCATACTACCGCCATAGAAAGAATGTTCATAAGTCTTCGGCGCAAATGTGCAAAATATGCGGAAAGCCATTAAATTCGACGTTAGAATTATATGAGCATCTCAAGGCTGCCCATGCTAGGGAGTTACTCGGATATAATGCGAGTCAAGGTCCCACAAAACAGGAGGTTACCCAAGAATTAGAAGGAGAATATGACGGTGACCAGGATTCTGTCGATCCCAGCGCAGAATATCAAGCCCGATACCCGTGTGACAATTGTGGTAAACAATTCGTCGGCTTGCTCGCTTTACAGAACCACCAGTGCGTAAATCAACTTCAATCATCTCCTCAGACCTTCGATTGTGAAATATGCCACAAGAGTTATACTTCTATTTCTGCGCTAAAGAGTCATCGCGGATGGCATTTGCGTTCTCCAGATGGTAAAGCGGCAGCCAATAATTCTGGCCTCTGGATGCCTCAGCACAAAGTTACCAGCAAGGTCAGCAAACATGAGGTGGTCGACCCCTCACAGCTTGCGCGCGTCACTCACTCGACGCCGTCGCCCGCAAGCGTCGCCAAGAGAAGATTACCGCCGGAGGTCGAGGTCACCGTCGTAAACCCCAACAAGAAATTGCGTTCCGATGACTCAGTCGAATTAGAGCAACAGAACAATTCCTCGACCGGAGCCGACGATAGATACTGCAACATATGCGACAAAGAGTTCACCAAGCGAGCGGCCTACCAGCGACACATGGACGAGGTGCACCAGCCCAACTCCGTGTTCTGTCCCGTCTGCGAGAAGAGTTTCACGCGCAAGTCAACGTTGATCGTCCACATGAAGAAACACTACGACGTTGGCGAGGGAAGCTCCGCGGCCGTGGAACAGAACGAGGACGACAACCTCGCGTGCGACATTTGCGGAGCTCAATATGATAACGAGAACGCTTTAAGAGCGCATCGTGCGATGCATCACGGTGATGATTCGGCGGAGTCGGAAGACGAGGGCAGCAGTGCGCCTCCCCCGGGTGAGTTCACGTGCGGCCAGTGCGGGGACGGCGTGGCGACCCCGCGCGACCTGATCGCCCACCGTACCATGCACGGCACCCCCACCAAGTTTTATTGCAACATTTGCAAGGTATACTTCGCACGCGCCATCGACCTGTCGTCGCACACGCGCGCACGGCACGCCGATAACGAGAAGGTGTTCTTCCCGTGCGCGATGTGCGACAGGTTCTACATGAACAAGAAGAGTTTGCAGCGACACATCGAGATGGCGCACTGA
Protein Sequence: MRVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPGLASKIRDCVSVEINEDDDLPTNVCRKCYDNVNNWHIFKDVCERSQNKLQRLIKNDGSQLEEVQIKSEPLSDEAYDDGVVIEGSYPDLECASTSSKLQPEGPPILASLGLTPRSDKNNVDPRMDWQRVHAILDLVQKDDVIDSLQSAEECDMLHHSDHDSDSETELNSNTSPKYFVNSENGYLCRNEQVISKIPLTPRKCNDKGMESENNEEEDEEMNEEEMNDSSQQYPSMPAMPEVSITVMRPTGETLHARQGIQQLASKECLVCGRSYRYSHNARRHELNAHSFDRYTNKVTTKKSHNTHMQPKLRPNPFNPKARLMPNPISHKMQLIPKGINAKIIQNKSVAPPKPIPVKTPKGTQNNLPYPLRIKALKDLQIKKKEPQILKTLLTTKPEVLVSEPEILNSGPESPETLISEPEIASFQVETILSEPDTYIQQDDEDVDGENHQGQNYDTVDMDSENEIEIARQKENAVDGEGDGEDEGEGDGEGPGDHLVINEGEEGNDMDNDDENNMERNQSDNEHYQADENADSQDGLQVGNENDGRDEDEENEHETKEGEEGNDERDDEQMEYNQEDDDEDLPPIAPVVEINEDLQTNSYNSEGNDEDLDETADPNDTAENVKELDPDKLYVTKTQRDFILKYRDIIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNTCTDLWKIIYNENGITEDLVLEDEPKDTKVAYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVQLVCVHCNSRFKDKALWKRHIRNGECTVYISCDLCSERFGNMQHFNDHALAVHAGSFDQSDNQNKCVDGRPTDCPVCGKKNSSYPNLVKHLKIIHNEEKPHYCQHCDSKYEQAADLNKHIYMEHSDRTLGVQSSEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCNICSNSYSTPQKLSEHVQQNHPGAAGAYVPMDYDFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGETKGFAPQIVGKPIRSFSVVQPSFLPFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADTADRNDSEENTMQASTEEDEYNLDENGSVLSTPQFNSFNFTNLTNNLQQQAAQPAQDVTPYSCELCFKRFPLRTSLWKHKRAKHGIINASASGSSDSTVMAGEGGRSSCTICKITFADKRSYYRHRKNVHKSSAQMCKICGKPLNSTLELYEHLKAAHARELLGYNASQGPTKQEVTQELEGEYDGDQDSVDPSAEYQARYPCDNCGKQFVGLLALQNHQCVNQLQSSPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDPSQLARVTHSTPSPASVAKRRLPPEVEVTVVNPNKKLRSDDSVELEQQNNSSTGADDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCEKSFTRKSTLIVHMKKHYDVGEGSSAAVEQNEDDNLACDICGAQYDNENALRAHRAMHHGDDSAESEDEGSSAPPPGEFTCGQCGDGVATPRDLIAHRTMHGTPTKFYCNICKVYFARAIDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01147532; iTF_01142543; iTF_01143991; iTF_01148254; iTF_01140354; iTF_01144706; iTF_01146661; iTF_01148988; iTF_00958109; iTF_01149759;
90% Identity: iTF_01140354;
80% Identity: -