Basic Information

Insect: Papilio protenor
Gene Symbol: -
Assembly: GCA_029286645.1
Location: JAGSMZ010000022.1:3007466-3015912[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.029 2.5 9.2 1.3 2 23 208 230 207 230 0.92

2 23 0.24 21 6.3 0.3 1 22 627 648 627 648 0.95

3 23 4.7 4.1e+02 2.3 0.3 1 22 690 711 690 713 0.82

4 23 0.0045 0.39 11.8 0.6 2 21 723 742 722 743 0.94

5 23 0.47 41 5.4 0.3 2 23 751 773 750 773 0.89

6 23 0.0053 0.46 11.5 0.1 3 23 794 815 792 815 0.96

7 23 0.0066 0.57 11.2 3.5 1 23 821 844 821 844 0.95

8 23 0.088 7.6 7.7 0.0 1 23 870 893 870 893 0.90

9 23 0.0038 0.33 12.0 3.5 1 23 898 920 898 920 0.97

10 23 0.0033 0.29 12.2 1.1 1 23 926 948 926 949 0.95

11 23 0.0016 0.14 13.2 1.3 1 23 963 985 963 985 0.97

12 23 0.00012 0.011 16.7 1.8 1 23 1034 1057 1034 1057 0.97

13 23 0.0033 0.29 12.2 1.7 1 23 1120 1143 1120 1143 0.96

14 23 0.00077 0.067 14.2 2.1 2 23 1167 1189 1166 1189 0.95

15 23 0.061 5.3 8.2 0.1 2 23 1195 1217 1194 1217 0.93

16 23 0.00057 0.049 14.6 0.4 1 23 1260 1282 1260 1282 0.98

17 23 0.00029 0.026 15.5 1.0 1 23 1291 1313 1291 1313 0.93

18 23 6.1e-05 0.0054 17.6 0.3 2 23 1407 1429 1407 1429 0.93

19 23 4.3e-07 3.7e-05 24.4 1.1 3 23 1436 1456 1435 1456 0.98

20 23 0.0081 0.71 11.0 0.1 3 23 1477 1497 1475 1498 0.94

21 23 0.084 7.3 7.8 0.0 1 23 1518 1540 1518 1540 0.97

22 23 0.0038 0.33 12.0 0.4 1 23 1546 1569 1546 1569 0.96

23 23 0.00018 0.015 16.2 0.4 1 23 1577 1600 1577 1600 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.029	2.5	9.2	1.3	2	23	208	230	207	230	0.92
2	23	0.24	21	6.3	0.3	1	22	627	648	627	648	0.95
3	23	4.7	4.1e+02	2.3	0.3	1	22	690	711	690	713	0.82
4	23	0.0045	0.39	11.8	0.6	2	21	723	742	722	743	0.94
5	23	0.47	41	5.4	0.3	2	23	751	773	750	773	0.89
6	23	0.0053	0.46	11.5	0.1	3	23	794	815	792	815	0.96
7	23	0.0066	0.57	11.2	3.5	1	23	821	844	821	844	0.95
8	23	0.088	7.6	7.7	0.0	1	23	870	893	870	893	0.90
9	23	0.0038	0.33	12.0	3.5	1	23	898	920	898	920	0.97
10	23	0.0033	0.29	12.2	1.1	1	23	926	948	926	949	0.95
11	23	0.0016	0.14	13.2	1.3	1	23	963	985	963	985	0.97
12	23	0.00012	0.011	16.7	1.8	1	23	1034	1057	1034	1057	0.97
13	23	0.0033	0.29	12.2	1.7	1	23	1120	1143	1120	1143	0.96
14	23	0.00077	0.067	14.2	2.1	2	23	1167	1189	1166	1189	0.95
15	23	0.061	5.3	8.2	0.1	2	23	1195	1217	1194	1217	0.93
16	23	0.00057	0.049	14.6	0.4	1	23	1260	1282	1260	1282	0.98
17	23	0.00029	0.026	15.5	1.0	1	23	1291	1313	1291	1313	0.93
18	23	6.1e-05	0.0054	17.6	0.3	2	23	1407	1429	1407	1429	0.93
19	23	4.3e-07	3.7e-05	24.4	1.1	3	23	1436	1456	1435	1456	0.98
20	23	0.0081	0.71	11.0	0.1	3	23	1477	1497	1475	1498	0.94
21	23	0.084	7.3	7.8	0.0	1	23	1518	1540	1518	1540	0.97
22	23	0.0038	0.33	12.0	0.4	1	23	1546	1569	1546	1569	0.96
23	23	0.00018	0.015	16.2	0.4	1	23	1577	1600	1577	1600	0.96

Sequence Information

Coding Sequence: atgCGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATATTTCCTACCACCAGTTCGGATGACTCGGAACCTCCTGGCCTCGCATCAAAAATCAGGGAATGCGTGAATGTAGAGATAAACGAAGATGACGACCTGCCAACTAATGTTTGCAGAAAATGCTGTGACAATGTCAGTAACTGGCACATTTTTAAGGATGTATGTGAAAGGTCACAAAACAAACTACAGACACTCATTAAAAATGATGGCAGCCAACTAGAAGAGGTGCAAATTAAAAGTGAACCTTTATCTGATGAGGCTTATGATGATGGAGTGGTTATTGAAGGATCATACCCTGACCTTGAGTGTGCATCAACATCAAGTAAAGTACAACCAGAAGGCCCTCCTATCTTGGCTTCACTGGGTCTCACACCGAGGAGTGATAAGGGTATGGAGAGCGAAAATAATGAGGAAGAAGATGAAATGAATGAAGAGATGAATGAGTCAGCTCAACAATATCCGGGCGTGCCCGCCATGCCCGAGGTGTCTATCACTGTGATGCGCCCCACAGGAGAGACGCTGCACGCCCGCCAAGGGATACAACAACTCGCGTCCAAAGAGTGCCTCGTTTGCGGACGATTTTACAGATATTCACATAACGCCAGGCGACATGAACTTAACGCTCACAGTTTTGACAGATACACTAACAAAGTAACCAACAAGAAATCTCACAATACACACAGGCAGCCGAAACTTAGACCCAATCCGTTCAATCCCAAAGCGAGGCTCATGCCTAATCCTATTAGTCATAAAATGCAGTTGATCCCTAAAGGGATTAATGCAAAAATCATACAGAATAAACCTGCCACCCCATCCAAACCTATACCAATTAAAACACCAAAGGGAACCCAAAATAATTTGCCATACCCGCTTCGTATTAAGGCATTGAAAGATTTACAGATAAAGAAAAAGGAACCACAAATCCTTAAGACTCTGTTGACAACGAAACCTGAAGTTTTGGTATCCGAACCGGAAATTCTTAATTCTGGTCCAGAAAGTCCGGAGACTTTGATATCTGAACCAGAAATCGCATCGTTCCAAGTAGAGACTATCCTTTCGGAACCGGATACATATATGCCacaagatgatgatgatgtcgaTGGTGAAATGCAAAATAATCAAGGTCATAATTACGATACTGTTGACATGGACTCCGAAAATGAGATTGAGATAGCTCGTCAAAAAGAAAACGTCGAAGGTGATGGGGATGGCGAAGGTGAAGGGGATGGTGATGGGGATGGCGATGGTGAAGGCGGTGTGGGTGATCATTTGGTCATTAACGAAAGGGAGGAAGGTAACGAAATGGATAATGACGATGAAAATAACATGGAACGAAATCCAAGCGACAATGAAAATGATCACGCAGATGACAATGATAGCCAGGATGGGTTACAAATCGACAACGAGAATGATGGCAGAGACGAAGATTATGAGAATGGACATGAAACCAAAGAAGGTATTGATGAACGAGACGATGAACAGATGGAATACAATCAAGATGACGATGATGAGGAACTGCCACCTATAGCACCCGTTGTCGAAATCAACGAAGACATGCAGACAAATTCGTACAACAGTGAAGGTAACGATGAAGATCTCGACGAAACTGCTGACCCTAACGACACAGTGGAGGACGTCAAGGAACTCGACCCTGATAAGCTATATGTGACAAAGACACAGCgagattttatacaaaaatatcgcGATATAATCGAACAGATTAATACAAAAAGATGCCTCTGTTGTGATAGGGAACATCCCCGCCGCAAAGCTGTCATACAACATTTGCAGAAAAATGGACACAAAGTCCCCAAACACACGTGCTACAACTGCGTTGTTACCTTTGGCCATATCGGCGCTCTGCTCAGTCACATGCGCTCCAATACTTGCACAGATCTATGGAAGattatttacaatgaaaatgGCATCACTGAAGATTTAGTTTTGGAGGACGAACCTAAAGATAccaaagtagcctataaagatatatttaacgCTAGGTCTTATGCTTGCAAATTATGTCCGGCTAAATTCCAATTGAAACAGTTTATAATGAAACATGTGCTGGACGTGCATGAAGATGGCCAGTCTCGCGTACAGCTCGTCTGCGTCCACTGCAACTCGAGGTTCAAAGATAAGGCGTTGTGGAAGAGACACATCCGCAACGGAGAATGTACTGTTTATATTTCATGCGACTTGTGTTCCGAAAGATTTGGCAATATGCAACATTTCAATGACCACGCATTAGCCGTACATGCCGGGAACTTCGACCAATCTGATAATCAGAACAAATGTGTCGACGGTCGTCCGACCGATTGTCCAGTTTGCGGGAAGAAGAACAGCACCTATCCAAATTTAGTGAAACATTTAAAGATTATTCACAACGAGGAGAAACCTCATTACTGCCAGCATTGCGATTCTAAATTTGAACAAACTGCTGATCTAAATAAACACATCTATATGGAACATTCTGATAGAACATTAGGCGTGCAGAGCAACGAGCCCGACATGTCTCTCGTGAAGGAGGAAGCCGAGGAGTACCACTACTCTTGCACAGAATGTAACGCCATATTCGAAACTGTCGACGCTTGGACGGATCATCAGGTGGCGGAACATAATCAAGTCGCTCACCATTGCGACCAATGCGACAAGAAATTTTTAAGGCCGTCGGAACTGGCGGAGCACAAGAATACGCATTTGAGAGTTAAATTTTATCCTTGCAACATTTGTTCCAATTCATACAGCACACCCCAAAAACTTTCTGAACACGTTCAGCAACACCATCCCGGAGCCGCGGGGGCGTACGCGCCTGTGGACTATGACTTCTTCTGCGACATCTGCATTCGGTCGTTCAAAAGCCGCCAGGCGTATTCGAACCACATGCGCATACACGCCAAAGTACCCACCACAAATAGAAAACCCGGAGAACCGAAAGGATTCGCTCCGCAAATTGTCGGTAAACCGATTAGATCCTTCTCGATGGTACAACCCAGTTTTCTTCCATTCAAACCCAATTGTAACGTCCCGAATGCGCCTTATTCCTGTGATATCTGCGGAAAAGGTTTCATGcacaagaaaaatatttggaaGCACAAGAAAGTGCTACATGCAGACACCGCGGAACGAAACGACAGCGAGGAGAACACCATGCAGGCCTCCACCGAAGAGGACGAATACAATTTAGATGAAAACGGTGCTGTTCTGTCGACGCCGCAATTCAATAGTTTTAACTTCACTAATTTAGCAAACAATTTGCAGCAACAGGCCGCACAGCCCCCCCAGGACGCCACACCTTATTCTTGCGAATTGTGTTTTAAACGGTTTCCACTTAGAACAAGTTTATGGAAACACAAACGCGCTAAACACGGAATCATCAACGCCAGCGCCAGCGGAAGTTCAGATTCGCCAATAATGGCTGGAGAAGGCGGCAGATCGAGTTGCACTATatgtaaaattactttttcagaCAAAAAATCGTACTACCGTCACAGAAAGAATGTTCACAAATCCTCGGCGCAAATGTGCAAAATATGCGGAAAACCATTGAATTCTACGTTAGAATTATACGAGCATCTCAAGGCCGCCCATGCCAGAGAATTACTCGGATATAACGCAAGTCAAGTGCCCACTAAACAGGAGCCTACTCAAGAATTGGAAGGGGAATATGACGGTGACCAGGATTCGGTCGACCCCAGTGCGGAATATCAAGCCCGCTACCCGTGCGACAACTGCGGCAAACAATTCGTCGGCTTGCTCGCTTTACAGAACCACCAATGCATACACCAGTCACAATCATCTCCTCAGACTTTCGACTGTGAAATATGTCATAAGAGTTATACTTCTATTTCTGCGCTAAAGAGTCACCGCGGCTGGCATCTACGTTCCCCGGACGGCAAAGCGGCTGCCAACAATTCGGGGCTTTGGATGCCTCAGCATAAAGTTACCAGCAAGGTCAGTAAGCACGAGGTGGTCGACCCCTCGCAGCTTGCGCGCGTCACTCACTCGACGCCGACGTCGACGCCCGCCAGCGTCGCTAAAAGGAGACTGCCGCCGGAAGTCGAGGTCACCGTCGTGAATCCCAACAAGAAGTTGCGTTCCGACGATTCGGTGGAATTGGAACAACAAAACAATTCCTCCACCGGGACCGACGATAGATACTGCAATATATGTGACAAGGAGTTCACCAAGCGAGCGGCTTACCAGCGGCACATGGACGAGGTGCACCAGCCCAACTCCGTGTTCTGTCCCGTCTGCGAGAAGAGTTTCACGCGCAAGTCGACGTTGATCGTCCACATGAAGAAACATTACGGTGGCGGTGAGGGCAGCTCCACCGGCGTCGACCAGAACGAAGATGACGGCCTCGCGTGCGACATTTGCGGGGCGCAGTACGATAATGAGAATGCTCTAAGAGCCCACCGAGCCATGCACCATGGTGATGATTCTGGTGAGTCGGAAGACGAGGGTAGCAGCGCGCCGCCCCCTGGCGAGTTCACGTGCGGGCAGTGCGGGGACGGTGTGGCGACGCCGCGCGACCTCATCGCCCACCGCACTATGCACGCCACGCCTACCAAGTTCTACTGCAACATCTGTAAGGTGTACTTCGCACGCGCCATCGACCTGTCATCGCACACGCGCGCGCGTCACTCTGACAATGAGAAGGTGTTTTTCCCATGTGCTATGTGTGACAGGTTTTACATGAACAAGAAGAGTTTGCAGCGGCACATCGAGATGGCGCACTGA
Protein Sequence: MRVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPGLASKIRECVNVEINEDDDLPTNVCRKCCDNVSNWHIFKDVCERSQNKLQTLIKNDGSQLEEVQIKSEPLSDEAYDDGVVIEGSYPDLECASTSSKVQPEGPPILASLGLTPRSDKGMESENNEEEDEMNEEMNESAQQYPGVPAMPEVSITVMRPTGETLHARQGIQQLASKECLVCGRFYRYSHNARRHELNAHSFDRYTNKVTNKKSHNTHRQPKLRPNPFNPKARLMPNPISHKMQLIPKGINAKIIQNKPATPSKPIPIKTPKGTQNNLPYPLRIKALKDLQIKKKEPQILKTLLTTKPEVLVSEPEILNSGPESPETLISEPEIASFQVETILSEPDTYMPQDDDDVDGEMQNNQGHNYDTVDMDSENEIEIARQKENVEGDGDGEGEGDGDGDGDGEGGVGDHLVINEREEGNEMDNDDENNMERNPSDNENDHADDNDSQDGLQIDNENDGRDEDYENGHETKEGIDERDDEQMEYNQDDDDEELPPIAPVVEINEDMQTNSYNSEGNDEDLDETADPNDTVEDVKELDPDKLYVTKTQRDFIQKYRDIIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNTCTDLWKIIYNENGITEDLVLEDEPKDTKVAYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVQLVCVHCNSRFKDKALWKRHIRNGECTVYISCDLCSERFGNMQHFNDHALAVHAGNFDQSDNQNKCVDGRPTDCPVCGKKNSTYPNLVKHLKIIHNEEKPHYCQHCDSKFEQTADLNKHIYMEHSDRTLGVQSNEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCNICSNSYSTPQKLSEHVQQHHPGAAGAYAPVDYDFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFAPQIVGKPIRSFSMVQPSFLPFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADTAERNDSEENTMQASTEEDEYNLDENGAVLSTPQFNSFNFTNLANNLQQQAAQPPQDATPYSCELCFKRFPLRTSLWKHKRAKHGIINASASGSSDSPIMAGEGGRSSCTICKITFSDKKSYYRHRKNVHKSSAQMCKICGKPLNSTLELYEHLKAAHARELLGYNASQVPTKQEPTQELEGEYDGDQDSVDPSAEYQARYPCDNCGKQFVGLLALQNHQCIHQSQSSPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDPSQLARVTHSTPTSTPASVAKRRLPPEVEVTVVNPNKKLRSDDSVELEQQNNSSTGTDDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCEKSFTRKSTLIVHMKKHYGGGEGSSTGVDQNEDDGLACDICGAQYDNENALRAHRAMHHGDDSGESEDEGSSAPPPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFYCNICKVYFARAIDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01141080;
90% Identity: iTF_01140354;
80% Identity: -