Kina003329.1
Basic Information
- Insect
- Kallima inachus
- Gene Symbol
- lrrfip2
- Assembly
- None
- Location
- HiC:18372646-18425621[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-76 4.5e-72 243.3 24.3 1 292 41 318 41 325 0.87 2 2 1 2.3e+04 -7.4 15.2 1 44 322 365 322 396 0.57
Sequence Information
- Coding Sequence
- ATGGTCAATATGCATGAAAATACGAGTGCAGCGACAGTCAAGATGGACCCGTCGCGGCGTCAGCGCACCCAGACCAAGGCCACGGCAGAGGAGCAGGCTCTTGACCAGATCGCGAGAGAGGCGGAACAGCGGTTAGCTGCTCGAAGAGCGGCGCGGGCGGAGGCTCGGGAGATCCGTATGAGGGAGCTAGAGCGACAGCAGCGCGAGCAGGAGGACCATGCCGACAAGGCGTATGATATGTACGCAGAGACAGTGGGACGGCGGGCTGGCAGTCGGCTAGCGACAATGAGTCCCAGCGCGCTGCACTCACCGAGACGAAGCTCAGAGGACTCGGATGATGTCCTCAGTATCAAGGATCTTAGGCATGAGTTAAAAGAAGTAGAAGAGAAATTCCGCAAGGCGATGATATTAAACGCACAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTGGAACTGCTCAAGGATCGGATAGAGGAATTGCAAGAGGAATACGCCCAGCTGCAGCGCGAGCACAGGGAGAAGTGCTCGAGCCACGAGCGGCTGAAGCGCGAGCACGCGTCGCTCGAGCGCGAGGTGGTGCTGGCGCGGGACGCGGTGCGCGCGCGGGACGCGGCGGCCGCGGCGGCCGGACGGGCCTTCGTCGAGGCGGCCGTCGCGCCCGACGCGCTCGCCGGCGAGCCCTGCGGACACGTGCCGCCGCTCGCGCTCGTCTCGCACGACTCGCAGCGCCTGCTCGACGACGCGGGCGAGGGCACGCTCGACGTGCGACTGTCGCGGCTGGCGAGCGCGCGCGCGGCGCTCGAGGGCGAGGTGCGCAAGCTGAAGCTGCAGCTGCACGAGGAGCGCGCGGCGCGGCAGAACGGCGTCGCGCACGCCGAGCGCGACGAGCACGCCGGCGAGCTGGACGCGCTGCGCAAGGCGGCCGCGGACGCCAAGGCGCGGGCGTCGCGCGCGGAGGCCGAGGCGGCGCTGCACGCGGCGGCCGTGGTGCGGCTCGAGGCGCAGGTGGCGCGGCTGCGCGCGCGGCAGGACCACCAGGACGAGCACGAGGAGCTGCTCAAGCAGGAGCGGCGCCGGCTGCAGCGGGAGGCGAGAGAGGCACTAAACCGAGTTGAAGAGTTGGAAACGGAGAACAGTCACCTCACGAAACGGCTCGACAAACTCAAGAATGCTAAGTCTGCATTGTTAAAGGACCTGTGA
- Protein Sequence
- MVNMHENTSAATVKMDPSRRQRTQTKATAEEQALDQIAREAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRAGSRLATMSPSALHSPRRSSEDSDDVLSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEYAQLQREHREKCSSHERLKREHASLEREVVLARDAVRARDAAAAAAGRAFVEAAVAPDALAGEPCGHVPPLALVSHDSQRLLDDAGEGTLDVRLSRLASARAALEGEVRKLKLQLHEERAARQNGVAHAERDEHAGELDALRKAAADAKARASRAEAEAALHAAAVVRLEAQVARLRARQDHQDEHEELLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00986117; iTF_00778024; iTF_00621251; iTF_00779518; iTF_00247211; iTF_01091952; iTF_01017750; iTF_01181904; iTF_00824762; iTF_00896827; iTF_01080733;
- 90% Identity
- iTF_01080733;
- 80% Identity
- -