Mach020272.1
Basic Information
- Insect
- Morpho achilles
- Gene Symbol
- lrrfip2
- Assembly
- GCA_947086495.1
- Location
- CAMTZB010000019.1:18182702-18190825[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.4e-77 3.2e-72 244.3 24.5 1 268 7 268 7 287 0.90 2 2 1 3.4e+04 -6.5 17.9 1 49 288 335 288 361 0.70
Sequence Information
- Coding Sequence
- ATGGTCTCCTTTTCACAGGCGGAACAGCGTCTGgcggcgcggcgggcggcgAGGGCGGAAGCGCGCGAGATCCGGATGAGAGAGCTTGAACGGCAGCAGCGGGAACAGGAGGACCATGCCGACAAAGCGTACGACATGTACACAGAGACTGTGGGCAGGCGCGCTGGCAGTCGACTGGCCGCCCTTAGCCCTAGCTCTATGCACTCGCCGCGTCGAAGCTCCGAAGATTCAGATGACGTACTTAGCATCAAGGATCTTAGGCATGAACTCAAAGAAGTAGAAGAGAAGTTCCGGAAGGCGATGATATTGAACGCGCAACTGGATAACGACAAAGCGGCGCTCGGGTACCAGTTAGAACTACTTAAGGACAGAATAGAGGAGCTTCAAGAAGAGTACGCACAACTACAGCGCGAACACAGAGAGAAGTGCTCCTCACACGAGCGGCTGAGGCGGGAGCACGCGTCGCTGGAGCGCGAGGTGGTGCTGGCGCGGGACGCGGTGCGCGCGCGggacgccgccgccgccgccgcgggCCGCGCCTTCGTGGAGGCGGCTTCGGCGCCCGGCGCGGACGCGGGCGAGGCGTGCGGCAGCGTGCCGCCGCTCGCGCTCGTATCGCACCAGTCGGAGCAATTGCTCAACGACGCCGGAGAGGGCACGCTAGATGTACGGCTGGAGAGGTTGGTCAGTGCGAAGGCGGCGCTGGAAGGCGAAGTGCGCAAACTCAAGCTGCAGTTGAACGACGAGCGCGCCGCCAGGCAAAATGGCGTCGCGTCACATCTGGACCGGGATCACGATAGTGAATTGGAAACGTTACGCAAAGCAGTAGTGGACGCTAAGGGACGGGCGACCAGAGCGGAAGCGGAAGCGGCCTTGCAAGCAGCTGCCGTGGCCCGTCTTGAAGCCCAAGTAGCCCGGCTGCGAGCGCGCCAGGACCACCAGGACGAGCACGAGGAACAGCTCAAGCAGGAGCGGCGGAAGCTGCAGAGAGAGGCCCGAGAAGCACTTAATCGAGTTGAAGAGTTGGAGACCGAGAACAGCCACCTCACGAAGCGGCTCGACAAACTCAAGAATGCCAAGTCGGCGCTCCTTAAGGACCTGTGA
- Protein Sequence
- MVSFSQAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYTETVGRRAGSRLAALSPSSMHSPRRSSEDSDDVLSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEYAQLQREHREKCSSHERLRREHASLEREVVLARDAVRARDAAAAAAGRAFVEAASAPGADAGEACGSVPPLALVSHQSEQLLNDAGEGTLDVRLERLVSAKAALEGEVRKLKLQLNDERAARQNGVASHLDRDHDSELETLRKAVVDAKGRATRAEAEAALQAAAVARLEAQVARLRARQDHQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00843553;
- 90% Identity
- iTF_01080733;
- 80% Identity
- -