Hmis018957.1
Basic Information
- Insect
- Hypolimnas misippus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_008963455.1
- Location
- JBBEEQ010000024.1:1620293-1625143[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-74 1.5e-69 235.3 31.5 1 289 7 274 7 284 0.88 2 2 1 3.1e+04 -6.9 15.1 1 48 281 327 281 356 0.60
Sequence Information
- Coding Sequence
- atgtttgtatCGTTGCAGGCGGAACAACGGCTAGCTGCTCGTCGAGCGGCGCGGGCGGAGGCGCGGGAGATTCGCATGCGGGAGCTGGAGCGCCAGCAGCGCGAGCAGGAGGACCATGCCGACAAGGCGTATGACATGTACGCAGAGACAGTGGGTCGGCGGGCAGGCAGTCGGCTAGCGGCGATGAGTCCCAGCGCGCTGCACTCGCCGAGACGAAGCTCGGAAGACTCGGACGACGTCCTCAGCATCAAAGACCTTAGGcatGAGCTCAAGGAGGTGGAAGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAACGACAAGGCTGCGCTCGGATACCAGCTCGAGCTGCTTAAGGACCGGATAGAGGAGCTGCAGGAGGAGTACGCGCAGCTGCAGCGCGAGCACCGGGAGAAGTGCTCGAGCCACGAGCGGCTGAAGCGCGAGCACGCGTCGCTGGAGCGCGAGCTGGCGCTGGCGCGCGACGCGGTGCGCGCGCGCgacgcggcggcggcggcggcggggcAGGCCTTCGTGGACGCGGCGGCCGGCGAGCGCTGCGGGCACGTGCCGCCGCTCGCGCTCGTGTCGCACCACTCGCAGCGCCTGCTGGACGACGCGGGCGAGGGCACGCTCGACGTGCGGCTCGAGCGGCTCGCGAGCGCGAAGACGGCGCTCGAGGGCGAGGTGCGCAAGCTGAAGCTGCAGCTGAACGAGGAGCGCGCGGCGCGGCAGAACGGCGTCGCGCACGCCGAGCGGGACGCGGACGGCGAGCTGgaggcggcgcggcgcgcggcggccgaGGCGAAGGCGCGCGCCGCGCGGGCGGAGGCCGAGGCGGCGCTGCACGCGGCCGCCGTGGTGCGCCTCGAGGCGCAGGTGGCGCGGCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCTGCTGAAGCAGGAGCGGCGCAAGCTGCAGCGCGAGgCGAGAGAAGCGTTAAACCGAGTCGAAGAATTGGAAACAGAGAACAGTCACCTCACGAAGCGGCTCGACAAACTCAAGAACGCCAAGTCAGCGCTTCTAAAAGACCTGTGA
- Protein Sequence
- MFVSLQAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRAGSRLAAMSPSALHSPRRSSEDSDDVLSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEYAQLQREHREKCSSHERLKREHASLERELALARDAVRARDAAAAAAGQAFVDAAAGERCGHVPPLALVSHHSQRLLDDAGEGTLDVRLERLASAKTALEGEVRKLKLQLNEERAARQNGVAHAERDADGELEAARRAAAEAKARAARAEAEAALHAAAVVRLEAQVARLRARQDHQDEHEELLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00843553;
- 90% Identity
- iTF_01080733;
- 80% Identity
- -