Math011095.2
Basic Information
- Insect
- Mellicta athalia
- Gene Symbol
- lrrfip2
- Assembly
- GCA_905220545.1
- Location
- HG992182.1:2429117-2437692[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6e-74 2e-69 235.5 20.5 1 262 17 272 17 287 0.91 2 2 2 4.7e+04 -7.5 18.0 1 44 295 338 295 368 0.69
Sequence Information
- Coding Sequence
- ATGGGCTTTTATTTCCAACCAGTGTGTTCCCAACTCGGTATTCTCTCGGCGGAACAGCGGCTagcggcgcggcgcgcggcgcgggcgGAGGCGCGCGAGATCCGCATGCGGGAGCTGGAGCGGCAGCAGCGGGAGCAGGAGGACCACGCCGACAAGGCGTACGACATGTACGCCGAGACAGTGGGCCGGCGGGCGGGCAGTCGGCTAGCGGCGATGAGTCCCGGCGCGCTTCATTCGCCGCGCCGGAGCTCCGAGGACTCCGATGACGTGCTCAGCATCAAGGACCTTAGGCACGAGCTGAAGGAGACGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTCGACAACGACAAGGCGGCGCTCGCCTACCAGCTGGAGCTGCTCAAGGACCGCATCGAGGAGCTGCACGAGGAGTACTCGCAGCTGCAGCGCGAGCACCGCGAGAAGTGCTCGAGCCACGAGCGACTGCGGCGCGAGCACGCGGCGCTGGAGCGCGACGTGCTGGCGGCGCGGGACGCCGTGCGCGCGCGCGAcgcggcggcggaggcggcgGGCCGCGCCTTCGTGgacgccgccgccgcgcccgccgcgcccgccggcCCGCCCTGCGGCGCCGTGCCGCCGCTGGCGCTCGTGTCGCACGCCTCGCGCCGCCTGCTCGACGACGCCGGCGAGGGCACGCTCGACGTGCGACTGGAGCGGCTGGCGAGCACCAAGGCGTCCCTGGAGAGCGAGGTGCGCAAGCTGAAGCTGCAGCTGAACGAGGAGCGCGCGGCGCGGTTGAACGGCGCAGCGGCCGAGCGCGACGAGGGCGAGCTGGATGCGCTGCGGCGCGCCGCGGCCGAGGGCAaggcgcgggcggcgcgcgcggaGGCAGAGGCGGCGCTGcacgcggccgccgcggcgcgGCTGGAGGCGCAGCTGGCGCGGCTGCGGGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCTGCTCAAGCAGGAGCGCCGCCGCCTGCAGCGCGAGgCGCGAGAGGCACTAAATCGAGTAGAAGAACTAGAAACGGAAAACAGTCACCTCACGAAACGGCTCGACAAACTCAAGAATGCTAAGTCTGCGCTATTAAAGGACCTGTGA
- Protein Sequence
- MGFYFQPVCSQLGILSAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRAGSRLAAMSPGALHSPRRSSEDSDDVLSIKDLRHELKETEEKFRKAMILNAQLDNDKAALAYQLELLKDRIEELHEEYSQLQREHREKCSSHERLRREHAALERDVLAARDAVRARDAAAEAAGRAFVDAAAAPAAPAGPPCGAVPPLALVSHASRRLLDDAGEGTLDVRLERLASTKASLESEVRKLKLQLNEERAARLNGAAAERDEGELDALRRAAAEGKARAARAEAEAALHAAAAARLEAQLARLRARQDHQDEHEELLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00843553;
- 90% Identity
- -
- 80% Identity
- -