Hbla023521.1
Basic Information
- Insect
- Hoplodrina blanda
- Gene Symbol
- retn
- Assembly
- GCA_949316365.1
- Location
- OX438594.1:10029344-10041870[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-19 7.4e-16 58.9 0.0 17 89 96 166 90 166 0.94 2 2 7.3 1.6e+04 -3.1 0.0 25 38 294 307 256 308 0.57
Sequence Information
- Coding Sequence
- ATGGAGATATTTAGAagCCGCATCCGACATTTCCATTGTTGCAATTTTATTGCCGGTGTTACCGTGCTGGCGGAGATCGTAAACTACGCAACAGCGCCCGATACTATCGGCGGCTCGCAGCGCGGCCTGATGGCTGATGGGCCGCACGACCGCACCGCGCCGCATTATCGCGCGCCACCGCCACCACAGCCGCGATTTTCATTCGTTTCTAATAAATTGATACGAGGGCTACGCGACGCGCCATTGGTCGACTCTCTCCCCGGACTTCGATCCTCGGACCCTGACCGCACTCCAATCAATCGGCTACCAATAATGGCGAAGTCGGTGTTAGATTTGTATGAGCTGTACAACCTGGTGATTGCTCGCGGAGGGCTAGTGGAGGTGATCAACAAGAAGCTGTGGCAGGAGATCATTAAGGGACTGAGGCTGCCGTCGTCCATCACATCTGCTGCCTTCACGTTACGCACACAatacaTGAAATACCTGTACGACTATGAgtgtgaaaagaaaaacctGTCAACCAGGAGCGAGCTGGACGCAGCCATTGAAGGCAACAAGCGTGAGGGACGTCGAGCTTCAGGACAGTACGACGCACAAGCTGCTTTAGCTATGCCCCCATTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCGCTGTCGCTGTCACTGGGGGGCGTGGCTCCGCGCTtgccgccgctgccgccgcaCGCGCCGCACCTAGCACAGCACGACATAGAGTACAGGGTTCGCGAGTACATGAAGATGATACAGCAGCAGAGGGAGCTAATGAGAAATGGCTCTGAATCGCCCCCCAGCAATGGACCAGCGCCAATAATGTCTCCTCGTGACGCAGCCGCCCTTAGTGCCATTGACGTCTCCCGCCTCACACTATGGTCGCTctacaacaataacaacaacaatagcCCACAACCGGACCTTGAGCCTCAAcgCGAGGCTCTAAACCTGAGCGAGAGCCCCAACTCGATGACGAGCGGCGGCAAGCGCGAAGCGTGCCGCTCCCCCGCACCGCCCGCCAAGCGCCGCACGCCGCGCCCCCCTTCACGGCCCGCCTCCCCCCGCGACCTGCACTCGCCGCCGCAGCACCGCCACAGCCGCCGGGACGCCACGTCACCGCCACAAATCAATGGCATGCCCAATACCAACGGTGTCAATGGGGCTGCTTTCAAAATAACAACCAGAGGTGACGCGAGCACAGGTGACCAGCAACTGGTAGTGTCAATAGAATTGAACGGCGTCACGTATGAAGGAGTGCTGTTCCCCTCAGGAAACGGACAGAACGGACACAGACAAATGGTGTCCTAA
- Protein Sequence
- MEIFRSRIRHFHCCNFIAGVTVLAEIVNYATAPDTIGGSQRGLMADGPHDRTAPHYRAPPPPQPRFSFVSNKLIRGLRDAPLVDSLPGLRSSDPDRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSMTSGGKREACRSPAPPAKRRTPRPPSRPASPRDLHSPPQHRHSRRDATSPPQINGMPNTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00176890; iTF_00446900; iTF_01084918; iTF_01342004; iTF_00830948; iTF_00952487; iTF_00905896; iTF_00273394; iTF_00036405; iTF_00038477; iTF_01264183; iTF_00274232; iTF_00784984; iTF_00951576;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -