Dmen030872.2
Basic Information
- Insect
- Diarsia mendica
- Gene Symbol
- retn
- Assembly
- GCA_949316265.1
- Location
- OX438902.1:15512194-15522390[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-19 9.7e-16 59.6 0.0 16 89 53 124 47 124 0.94 2 2 4.2 2.2e+04 -2.5 0.0 25 38 251 264 213 267 0.55
Sequence Information
- Coding Sequence
- ATGGGCGGCCGCGCCGCGCTCGCGGACGCCTCTCATTGGCCCGCCGCGGGGTTGTCGGGCTCCAAGGGCCTTGATACTGCTCTCGATAAGCGGAGAGGCGTCAAATGTCGATTCGATCGATTATCGCCCGTGTCGTCGCGCGCCGTCGACTGTGACCACCGCACTCCAATCAACCGGCTACCAATAATGGCGAAGTCGGTGCTGGACCTGTACGAGCTGTACAACCTGGTGATAGCCCGCGGTGGGCTGGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATTATCAAGGGGCTGCGGCTGCCATCGTCTATCACGTCTGCTGCCTTCACGTTACGCACACAATACATGAAATACCTGTATGACTACGAGTGTGAGAAGAAGAACCTTTCCACCAGGAGTGAGCTGGATGCAGCTATTGAAGGCAACAAGCGTGAGGGTCGCCGCGCCTCGGGACAGTACGACGCACAAGCTGCTTTAGCTATGCCCCCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCGCTGTCGCTGTCGCTGGGGGGCGTGGCCCCGCGcctgccgccgctgccgccgcacGCGCCGCATCTAGCGCAGCATGACATCGAGTACAGGGTGCGCGAGTACATGAAGATGATACAGCAGCAGAGGGAGCTTATGAGAAATGGTTCCGAATCACCCCCCAGCAACGGCCAAGCGCCAATAATGTCACCCCGCGACGCCGCCCTCAGTGCCATCGACGTCTCCCGCCTCACCCTCTGGTCGCTCtacaacaataacaacaacaacagccCACAACCAGACCTTGAGCCACAACGCGAGGCTCTGAATCTGAGCGAGAGCCCCAACTCGATCACAAGCGGAGGCAAGCGCGAGGCATGCCGGTCTCCCGCACCGCCCGCTAAGCGCCGCACACCGCGGCCCATCTCCCGCCCCGCCTCGCCCCGCGACCACCTGCACTCGCCGCCACAGCACCGCCACAGCCGCAGGGACACCACGTCACCACCACAGATCAACGGCATGCCCAATTCTAATGGTGTCAATGGAGCTGCCTTCAAGATTACCACCAGAGGAGACGCAAGCACAGGAGACCAGCAACTAGTAGTGTCAATAGAGCTGAACGGAGTAACGTATGAAGGAGTACTCTTCCCCTCAGGCAACGGTCAGAACGGACACAGACAAATGGTGTCctaa
- Protein Sequence
- MGGRAALADASHWPAAGLSGSKGLDTALDKRRGVKCRFDRLSPVSSRAVDCDHRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGQAPIMSPRDAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSITSGGKREACRSPAPPAKRRTPRPISRPASPRDHLHSPPQHRHSRRDTTSPPQINGMPNSNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00809841;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -