Mcon011256.1
Basic Information
- Insect
- Mamestra configurata
- Gene Symbol
- retn
- Assembly
- GCA_002192655.2
- Location
- NDFZ01005480.1:548748-558308[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-20 1e-16 61.6 0.1 14 89 3 76 1 76 0.94 2 2 2.7 9e+03 -2.3 0.0 25 38 204 217 165 220 0.57
Sequence Information
- Coding Sequence
- ATGTACAAACTACAAAGCACTCCAATCAACCGGCTACCGATAATGGCGAAGTCGGTGCTGGATTTGTATGAGCTCTACAACCTGGTGATTGCTCGCGGCGGCTTGGTGGAAGTCATCAACAAGAAGTTGTGGCAGGAGATCATCAAGGGGCTGCGGCTGCCGTCGTCCATCACGTCTGCAGCCTTTACGTTACGCACACAaTACATGAAATACCTGTATGACTACGAGTGCGAGAAGAAGAACTTATCGACCAGGAGCGAGCTGGATGCAGCCATCGAAGGCAACAAGCGTGAAGGGCGCCGCGCCTCGGGCCAGTACGACGCACAAGCTGCGTTAGCCATGCCCCCACTAAATCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCGCTGTCGCTGTCGCTGGGGGGCGTCGCGCCGCGCCTGCCTCCGCTGCCGCCGCACGCGCCGCACCTCGCGCAGCACGACATCGAGTACCGGGTGCGGGAGTACATGAAGATGATACAGCAGCAGAGGGAGCTTATGAGAAATGGATCCGAATCGCCCCCTAGCAATGGTCCGGCGCCAATAATGTCACCTCGCGACGCAGCCGCCCTCAGTGCCATCGACGTCTCACGCCTCACTCTCTGGTCGCtctacaataataacaacaacaacagcccCCAACCGGACCTTGAGCCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCTCTGTCGAGCGGCCACCGCCACAGCCGCAGGGACGCCACCTCACCGCAACAGATCAACGGCATGCCCAATACTAACGGAGTTAATGGAGCTGCCTTCAAGATTACTACTAGAGGAGACGCGACGACAGGAGACCAACAACTAGTGGTATCAATAGAGCTGAACGGAGTAACGTATGAAGGAGTACTATTCCCATCAGGCAATGGCCAGAACGGACACAGACAAATGGTGTCTTAA
- Protein Sequence
- MYKLQSTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSLSSGHRHSRRDATSPQQINGMPNTNGVNGAAFKITTRGDATTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00809841;
- 90% Identity
- -
- 80% Identity
- -