Alit023264.2
Basic Information
- Insect
- Agrochola litura
- Gene Symbol
- retn
- Assembly
- GCA_949152395.1
- Location
- OX424504.1:9274330-9281245[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-19 5.5e-16 60.2 0.0 17 89 17 87 7 87 0.95 2 2 4.9 1.9e+04 -2.5 0.0 25 38 215 228 177 233 0.60
Sequence Information
- Coding Sequence
- ATGGTCTTGTTAGTAAATCATCACACAGATTCACCTTACTGGTTTGGAGGCACTCCAATCAATCGGCTACCGATAATGGCGAAGTCGGTGCTAGACTTGTACGAGCTATACAACCTGGTGATAGCTCGCGGCGGCCTGGTGGAGGTCATCAATAAGAAGTTGTGGCAAGAGATCATCAAGGGACTGCGGCTGCCATCGTCCATCACGTCTGCTGCTTTCACATTACGTACACAATACATGAAATACCTGTATGACTACGAGTGCGAGAAGAAGAACCTATCAACCAGAAGCGAGCTGGATGCAGCCATTGAAGGGAACAAGCGTGAAGGACGTCGCGCCTCTGGGCAGTATGACGCACAAGCTGCTTTAGCTATGCCCCCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCACTGTCGCTGTCGCTGGGGGGTGTCGCACCGCGGCTGCCACCGCTGCCGCCGCATGCGCCGCATCTCGCACAGCACGACATCGAGTACAGGGTACGCGAGTATATGAAGATGATACAGCAGCAGAGGGAGCTTATGAGAAATGGCTCCGAGTCGCCCCCCAGCAATGGCCCAGCACCAATAATGTCTCCTCGTGACGCAGCCGCCCTCAGTGCCATCGACGTCTCCCGCCTCACTCTCTGGTCACTCtacaacaataataacaacaacagCCCACAACCGGACCTTGAACCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCAGTGACGAGCGGCGGCAAGCGCGAGGCGTGCCGctcgcccgcgccgcccgccaaGCGCCGCACGCCGCGCCCCGTCAGCCGCCCCCCCTCCCCCTCACCGCGCGCCGAGCTGCACGAGGCGCAGCACCGCCACAGCCGCAGGGACGCCACGTCGCCACCACAGATCAACGGTATGCCCAATTCCAACGGTATCAATGGAGCTGCCTTCAAGATTACTACCAGAGGAGATGCGAGCACAGGTGACCAGCAACTGGTAGTGTCAATAGAGCTGAACGGAGTAACGTATGAAGGAGTACTCTTTCCGTCAGGCAACGGTCAAAATGGACACAGACAAATGGTGtcttaa
- Protein Sequence
- MVLLVNHHTDSPYWFGGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSVTSGGKREACRSPAPPAKRRTPRPVSRPPSPSPRAELHEAQHRHSRRDATSPPQINGMPNSNGINGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00809841;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -