Llea017115.1
Basic Information
- Insect
- Lithophane leautieri
- Gene Symbol
- retn
- Assembly
- GCA_949152455.1
- Location
- OX424475.1:6437628-6444135[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-19 5e-16 59.6 0.0 17 89 25 95 12 95 0.91 2 2 4.7 1.1e+04 -2.5 0.0 25 38 223 236 185 241 0.60
Sequence Information
- Coding Sequence
- ATGGGAGGGCTGTTCTTGTTTCGGGTATTTGCGATTTGGTATGCAGCGTTGAAGGTTCGGCTTGTTGATCTTCGCACTCCAATCAATCGGCTACCGATAATGGCGAAGTCGGTGCTAGACCTGTACGAGCTGTACAATCTGGTGATAGCTCGCGGCGGGCTGGTGGAGGTCATCAATAAAAAGCTGTGGCAGGAGATCATCAAGGGACTGCGGCTGCCATCGTCCATCACGTCTGCTGCCTTTACGTTACGCACACAatacaTGAAATACCTGTATGACTACGAGTGCGAGAAGAAGAACCTTTCAACCAGGAGCGAGCTGGATGCAGCCATTGAAGGGAACAAGCGTGAGGGACGTCGTGCCTCTGGGCAGTATGACGCACAAGCTGCTTTAGCTATGCCCCCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCACTGTCGCTGTCGCTGGGGGGTGTCGCGCCGCGTCTGCCACCGCTGCCACCGCACGCGCCGCATCTCGCACAGCACGATATTGAGTACAGGGTACGCGAGTATATGAAGATGATACAGCAGCAGAGGGAGCTTATGAGAAATGGCTCCGAATCACCCCCCAGCAATGGCCCAGCACCAATAATGTCACCTCGTGATGCAGCCGCCCTCAGTGCCATCGACGTCTCCCGCCTCACTCTCTGGTCACTctacaataataacaataacaacagcCCACAACCGGACCTTGAACCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCGGTGACGAGCGGCGGCAAGCGCGAGGCGTGCCgctcgcccgcgccgcccgccaagcgccgcacgccgcgccccGCCAGCCGCCCCCcctcgcccgcgcccgcgccgcacgaCGCGCCGCACCGCCACAGCCGCAGGGACGTCACGTCGCCGCCGCAGATTAACGGTATGCCCAATTCCAACGGTGTCAATGGAGCTGCTTTCAAGATTACTACCAGAGGTGACGCGAGCACAGGTGACCAGCAACTGGTAGTGTCAATAGAGCTGAACGGAGTAACGTATGAAGGAGTACTCTTTCCCTCAGGCAACGGTCAAAATGGACACAGACAAATGGTGTCTTAA
- Protein Sequence
- MGGLFLFRVFAIWYAALKVRLVDLRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSVTSGGKREACRSPAPPAKRRTPRPASRPPSPAPAPHDAPHRHSRRDVTSPPQINGMPNSNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00809841;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -