Ppra038615.1
Basic Information
- Insect
- Pseudoips prasinana
- Gene Symbol
- retn
- Assembly
- GCA_951640165.1
- Location
- OX621251.1:23612481-23619464[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-20 3e-16 61.6 0.0 14 89 5 78 1 78 0.93 2 2 5 3.1e+04 -2.6 0.0 25 38 206 219 168 220 0.56
Sequence Information
- Coding Sequence
- ATGAACTTTCTCTTTGTTGCAGGAACACCAATCAATCGGTTACCGATAATGGCAAAATCTGTCCTGGATCTCTACGAGCTGTACAACTTGGTGATCGCTCGCGGCGGCCTCGTCGAGGTAATCAACAAAAAACTGTGGCAGGAGATCATCAAAGGACTCCGGCTCCCGTCGTCCATCACTTCTGCAGCATTCACGTTACGCACACAATATATGAAGTACCTGTACGACTATGAGTGCGAGAAGAAGAACTTGTCAACGCGGAGTGAGCTCGATGCCGCCATCGAAGGGAACAAGCGGGAGGGGAGACGCGCCTCGGGGCAGTACGATGCACAAGCGGCATTAGCTATGCCGCCACTAAACCGCGTGCCAGCGTCGCTCGCGCAGCTGTCACAGCACATGCAGCCACTGTCGCTATCGCTCGGAGGCGTCGCGCCACGCTTACCGCCGCTGCCGCCGCACGCGCCGCACCTCGCGCAGCACGACATCGAGTACCGCGTGCGCGAGTACATGAAGATGATACAACAGCAACGCGAACTCATGAGAAATGGATCAGAATCTCCACCAAGCAATGGTCCCGCCCCAATGATGTCCCCCCGCGACGCTGCTGCCCTCAGTGCCATCGACGTATCCCGCCTCACGCTGTGGTCCCtctacaacaacaacaacaacagtcCCGCGCCTGACCTCGAGCCGCAACGCGAGGCCCTGAACCTAAGCGAGAGTCCAAACTCGAGCGCAAGCGGCGGCAAGCGCGAGGCGTGCCGCTCGCCCGCGCCACCCGCCAAGCGCCGCACGCCGCGCCCGCCctcgccgcccgcgccgccccCCGCGCGCCCCCGCCTGTCACCACCGCCGCACGCGCTTAACGGCGCCGCCAATGGTGTCAACGGAGCAGCCTTCAAGATCACAACTAGAGGAGATGCGAATACTGGAGACCAACAACTCGTAGTATCAATAGAACTGAACGGCGTCACGTACGAAGGCGTCCTCTTCCCCTCCGGCAACGGGCAAAACGGACACAGGCAAATGGTCTCTTAA
- Protein Sequence
- MNFLFVAGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGPAPMMSPRDAAALSAIDVSRLTLWSLYNNNNNSPAPDLEPQREALNLSESPNSSASGGKREACRSPAPPAKRRTPRPPSPPAPPPARPRLSPPPHALNGAANGVNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00809841;
- 90% Identity
- iTF_00967835;
- 80% Identity
- -