Hnat010644.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Heliconius nattereri
Gene Symbol
lrrfip2
Assembly
GCA_013403645.1
Location
JAAIXI010000237.1:10025354-10039536[+]

Transcription Factor Domain

TF Family
LRRFIP
Domain
LRRFIP domain
PFAM
PF09738
TF Group
Unclassified Structure
Description
LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.4e-68 8.4e-64 215.8 22.1 1 263 122 391 122 419 0.87
2 2 1 1.9e+04 -6.0 13.9 1 48 415 461 413 487 0.62

Sequence Information

Coding Sequence
aTGGGTGAACGTTGTGAAATAGCTACTCCGGAAAACAGTGACGATGAGAGCGGAGATGCATTTACAGATGGTGATTTTGGTGATTCTGAGGAAGATACGGTTGTAGGacataatttgataaaaactACACATATGCCGGTCAATGAAAGTGTAAATactgaaattaaattgaacaGTAGTATAGATTGTATAGACTATAGTTTAGACCAATCAAGTAGTGTACATGAGGAGATTGACGATATTAGTGAAAATATGCAGCTAAATGACTTTACAAACGGTGATAATTCATCGGCGGACTTAGGAAGAGATTCACAAAGCGACAACGGCTCCATCGTTGGGATTCTCGGAGATCAACATAATcatGCGGAACAACGGCTGGCGGCGCGTCGTGCGGCGCGGGCAGAGGCGCGCGAGATCCGCATGCGGGAGCTAGAACGTCAGCAGAGAGAACAAGAAGACCATGCTGATAAAGCGTACGATATGTACGCAGAAACGGTGGGAAGAAGGACAGGCAGTCGGCTAGCGGCGTTAAGTCCCAGCGCAATGCACTCTCCTCGGCGTAGTTCAGAGGACTCGGACGATGTTCTTAGCGTCAAGGACCTtaagtacGAGCTAAAAGAAGTAGAAGAGAAGTTCCGCAAGTCGATGATCCTTAATGCCCAATTAGACAATGACAAAGCGGCGCTTGGATATCAGATCGAGTTGTTAAAGGATAGGGTAGAGGAGTTTCAGGAGGAATATGCGCAATTACAGcGCGAACACAAAGAAAAATGCTCATCATACGAGCGTCTAAAACGTGAACACGCGTCCTTAGAACGCGAAGTGTCACTCGCACGGGACGCCGTGCGCGCGCGGGACGCCGCCGCTGCGGCTGCGGGACGCGCCTTCGTGGAGGCCGCCGCCGCGCCCGACGCGCCGCCCGGCGACCGCTGCGGCAGCGTGCCGCCGCTGGCGCTGGTGTCGCACACGTCGGAGCAACTTCTCAACGACGCGGGGGAGGGGACGTTGCGGGACGCGTTGACAAGTCTGACAGCGTGCTGCCGTTGGTaTGTGCGGCTCGAGCGTCTAGCAAGTGCTAAAGCGGAATTAGAAGGCGAAGTGCGTAAACTCAAGCTGCAGTTAAACGACGAGCGTGCGGCGAGACAAAATGGCGTCGCGCATATGCACCGGGACATTGATGGAGAGTTGGAAACTCTCCGTAAATCGGTATCGGAAGCTAAAGGTCGCGCGGCTCGAGCAGAAGCCGAGGCGGCCATACAAGCGGCGGCGGTCGTGCGGCTGGAGGCACAAGTCGTGCGCCTAAAGGCCAGGCAGGACCACCAAGATGAGCACGAGGAGATGCTGAAGCAGGAGAGGCGGAAGCTGCAGAGGGAGGCGAGAGAAGCACTAAACCGAGTCGAAGAACTAGAAACAGAAAACAGTCATCTAACAAAACGTCTTGACAAACTAAAGAACGCCAAGTCAGCTCTATTAAAGGACCTGTGA
Protein Sequence
MGERCEIATPENSDDESGDAFTDGDFGDSEEDTVVGHNLIKTTHMPVNESVNTEIKLNSSIDCIDYSLDQSSSVHEEIDDISENMQLNDFTNGDNSSADLGRDSQSDNGSIVGILGDQHNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRTGSRLAALSPSAMHSPRRSSEDSDDVLSVKDLKYELKEVEEKFRKSMILNAQLDNDKAALGYQIELLKDRVEEFQEEYAQLQREHKEKCSSYERLKREHASLEREVSLARDAVRARDAAAAAAGRAFVEAAAAPDAPPGDRCGSVPPLALVSHTSEQLLNDAGEGTLRDALTSLTACCRWYVRLERLASAKAELEGEVRKLKLQLNDERAARQNGVAHMHRDIDGELETLRKSVSEAKGRAARAEAEAAIQAAAVVRLEAQVVRLKARQDHQDEHEEMLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00212485; iTF_00780267; iTF_00781847; iTF_00782658; iTF_00213464; iTF_00457248; iTF_00775268; iTF_00774505; iTF_00458066;
90% Identity
iTF_00781847;
80% Identity
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