Hmel004115.1
Basic Information
- Insect
- Heliconius melpomene
- Gene Symbol
- Lrrfip2
- Assembly
- None
- Location
- Hmel220003o:9726322-9736479[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.5e-62 1.4e-57 195.3 34.7 1 264 122 365 122 392 0.85 2 2 1 1.9e+04 -6.0 15.3 1 48 388 434 386 461 0.67
Sequence Information
- Coding Sequence
- ATGGGTGAGCGTTGTGAAATGGCTACTCCGGAAAACAGTGACGATGAGAGCGGAGATGCATTTACAGATGGTGATTTTGGTGATTCCGAGGAAGATACGTTTGTAGGACATAATTTAATAAAAACTACACATATGCCTGTCAATGAAAGTGTAAATTCTGAAATTAAATTGAACAGTAATATAGATTGTATAGACAATAGTTTAGACCAATCGAGTAGGGTACACGAGGACATTGACGATATTAGTGAAAATATGCAGCTAAATGACTTTACAAACGGTGATAATTCATCGGCGGACTTAGGAAGAGATTCACAAAGCGACAACGGCTCCATCGTTGGGATTCTCGGCGATCAACATAATCATGCGGAACAACGGCTGGCGGCGCGTCGTGCGGCGCGGGCAGAGGCGCGCGAGATCCGCATGCGGGAGCTAGAACGTCAGCAGAGAGAACAAGAAGATCATGCTGATAAAGCGTACGATATGTACGCAGAAACGGTGGGAAGAAGGACAGGCAGTCGGCTAGCGGCGTTAAGTCCCAGCGCAATGCACTCTCCTCGGCGTAGTTCAGAGGACTCGGACGATGTTCTTAGCGTCAAGGACCTTAGGCACGAGCTAAAAGAAGTAGAAGAGAAGTTCCGCAAGGCGATGATCCTTAATGCGCAATTAGACAATGACAAAGCGGCGCTTGGATACCAGCTCGAGTTGTTAAAGGATAGGATAGAGGAGTTACAGGAGGAATATGCGCAATTACAGCGCGAACACAAAGAAAAATGCTCATCGCACGAGCGTCTAAAACGTGAACACGCGTCCTTAGAACGCGAAGTGTCACTCGCACGGGACGCAGTGCGCGCGCGAGACGCCGCCGCCGCGGCTGCGGGACGCGCCTTCGTGAGGCCGCTGCCGCGCCCGACGCGCCGCCCGGCGACCGCTGTGGCAGCGTGCCGCCGCTCGCGCTGGTGTCGCACACATGTGCGGCTCGAGCGTCTAGCAAGTGCTAAAGCGGAATTAGAAAGCGAAGTGCGTAAACTCAAGCTGCAGTTAAACGACGAGCGTGCGGCGAGACAAAATGGCGTCGCGCATATGCACCGGGATGTTGATGGCGAGTTGGAAACCCTCCGTAAATCGGTATCGGAAGCTAAAGGTCGCGCGGCTCGAGCAGAAGCCGAGGCGGCCATACAAGCGGCGGCGGTCGCGCGGCTGGAGGCACAAGTCGTGCGACTAAAGGCCAGGCAGGACCACCAAGATGAGCACGAGGAGATGCTGAAGCAGGAGAGGCGGAAGCTGCAGAGGGAGGCGAGAGAAGCACTAAACCGAGTCGAAGAACTAGAAACAGAAAACAGTCATCTAACAAAACGTCTTGACAAACTGAAGAACGCCAAGTCAGCTCTATTAAAGGACCTGTGA
- Protein Sequence
- MGERCEMATPENSDDESGDAFTDGDFGDSEEDTFVGHNLIKTTHMPVNESVNSEIKLNSNIDCIDNSLDQSSRVHEDIDDISENMQLNDFTNGDNSSADLGRDSQSDNGSIVGILGDQHNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRTGSRLAALSPSAMHSPRRSSEDSDDVLSVKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEYAQLQREHKEKCSSHERLKREHASLEREVSLARDAVRARDAAAAAAGRAFVRPLPRPTRRPATAVAACRRSRWCRTHVRLERLASAKAELESEVRKLKLQLNDERAARQNGVAHMHRDVDGELETLRKSVSEAKGRAARAEAEAAIQAAAVARLEAQVVRLKARQDHQDEHEEMLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00781041;
- 90% Identity
- iTF_00781847;
- 80% Identity
- -