Dvan008312.1
Basic Information
- Insect
- Dione vanillae
- Gene Symbol
- lrrfip2
- Assembly
- GCA_037178615.1
- Location
- JAZFAU010000099.1:2561611-2572945[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-75 6.2e-71 240.2 21.1 1 264 122 379 122 406 0.88 2 2 1 3.7e+04 -7.3 15.1 11 161 412 459 393 479 0.50
Sequence Information
- Coding Sequence
- ATGGGCGAACGTTGTGAATTGGCTACTCCTGAAAACAGTGACGATGAGAGTGGAGATGCTTTTACAGATGGTGACTTTGGTGATTCAGAAGAAGAAACGGTAGTAGAACGTAGCTCGATTAAAACCGCACATATGCCTGTTAATGAAAGTGTTAATTCTGAAATTCAAGTGAATAGCAGTGTCGATTGTATAGATAATTGTTTAGACCAATCGAATAGTGTATACGAGGAGTTTGATGATAGTAATGGAAATATGCAGCACAGTGACTTTAAAAACGGTGATAATTCATCGGCGGATTTAAGAAGAGACTCACAAAGCGACAACGGCTCCATTGTTGGAATTCTTGGGGATCAACATAATCATGCAGAACAGCGGCTAGCGGCGCGTCGTGCGGCGCGGGCAGAGGCGCGCGAGATCCGCATGCGGGAGCTAGAACGTCAGCAGCGGGAACAAGAGGACCATGCTGATAAAGCGTATGATATGTACTCGGAAACAGTGGGAAGGAGGACAGGCAGTCGGCTAGCGGCGTTGAGCCCAAGCACATTGCATTCGCCTCGTCGTAGTTCAGAGGATTCGGACGATGTTCTTAGCATCAAGGACCTTAGGCATGAGCTAAAAGAAGTGGAAGAGAAATTCAGAAAGGCGATGATCCTTAATGCCCAATTGGACAATGACAAGGCGGCGCTCGGATACCAGCTGGAGTTGTTGAAGGATAGAATAGAGGAGCTGCAAGAGGAATATGCGCAATTACAGCGCGAACACAAAGAGAAATGCTCGTCGCACGAGCGCTTGAAACGCGAGCACGCGTCGCTGGAGCGCGAGGTGTGCCTGGCGCGGGACGCGGTGCGCGCGCGcgacgcggcggcggcggcggcgggccgCGCCTTCGTGGAGGCGGCCGCCGCGCCCGACGCGCCGCCCGGCGACCGCTGCGGCAGCGTGCCGCCGCTCGCGCTCGTGTCGCACGGCTCCGAGCGCCTGCTCAACGACGCCGGCGAGGGCACGCTCGACGTGCGGCTCGAGCGCCTCGCCGCCGCCAAGACGGCGCTGGAGGGCGACGTGCGCAAGCTCAAGCTGCAGTTGAACGAGGAGCGCGCGGCCAGGCAGAACGGCGTCGCGCACGCGCACCGCGACGTTGACGGCGAGCTGGAGACTCTCCGCAAGTCGGTGTCAGAGGCGAAGGGTCGCGCGGCGCGCGCGGAGGCGGAGGCGGCCATACAGGCGGCGGCGGTCGCGCGGCTGGAGGCGCAGGTCGCGCGGCTCAAGGCCAGGCAGGACCACCAGGACGAGCACGAGGAGATGCTCAAGCAGGAGAGGCGGAAGCTGCAGCGAGAGGCGAGAGAAGCGCTAAACCGAGTGGAAGAACTAGAAACAGAAAATAGTCATCTTACGAAACGTCTTGACAAATTGAAGAACGCCAAGTCCGCTCTATTAAAGGACCTGTGA
- Protein Sequence
- MGERCELATPENSDDESGDAFTDGDFGDSEEETVVERSSIKTAHMPVNESVNSEIQVNSSVDCIDNCLDQSNSVYEEFDDSNGNMQHSDFKNGDNSSADLRRDSQSDNGSIVGILGDQHNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYSETVGRRTGSRLAALSPSTLHSPRRSSEDSDDVLSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEYAQLQREHKEKCSSHERLKREHASLEREVCLARDAVRARDAAAAAAGRAFVEAAAAPDAPPGDRCGSVPPLALVSHGSERLLNDAGEGTLDVRLERLAAAKTALEGDVRKLKLQLNEERAARQNGVAHAHRDVDGELETLRKSVSEAKGRAARAEAEAAIQAAAVARLEAQVARLKARQDHQDEHEEMLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00781041;
- 90% Identity
- iTF_00781847;
- 80% Identity
- -