Beup005921.1
Basic Information
- Insect
- Boloria euphrosyne
- Gene Symbol
- lrrfip2_1
- Assembly
- GCA_951802675.2
- Location
- OX637874.1:14037265-14058197[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-76 3.5e-72 244.0 25.5 1 264 120 380 120 402 0.91 2 2 1 3.2e+04 -6.2 19.2 1 44 403 446 403 478 0.70
Sequence Information
- Coding Sequence
- ATGGGCGAGCAATCCTTTTTGGCCACTCCTGAAAACACCGACGAAGAGAGTGGAGATGCTTTTACAGATGGTGATTTTGGTGATTCTGAAGAAGAGACTGTGGTAGAGCGTAATTTACTAAAAACAGCACATATGCCTATCAATGAAAGTGTTAATTCCGAAATTAAAGTGAATAGCGATATCGACTGTACGGATGACAGTTTAGACCAAACGAATGGTGTTCAAGAGTTTGCTGATTTGAAGGAAGAAAATATGCATTTAAGTGACTTTGCTAACGGTGACAGCTCATCAGATTTACGGAGAGATTCGCAAAGTGATGGCTCCATCGTTGGAATTCTCGGCGACCAGCATAGTCACGCAGAACAACGACTAGCGGCGCGTCGTGCAGCGCGGGCGGAGGCGCGGGAGATCCGTATGCGCGAGTTGGAAAGGCAGCAGCGCGAGCAAGAAGACCATGCTGATAAGGCGTATGATATGTACGCAGGGAAAGAGAAGACGGTGGGAAGGCGGACAAGCAGTCGGCTAGCGGTGTTGAGCCCCAGCGCGCTACACTCGCCTCGGCGCAGTTCTGAGGATTCTGACGATGTGCTTAGCATCAAAGACCTTAGGCATGAACTAAAAGAAGTGGAGGAGAAGTTCCGCAAAGCGATGATCCTCAACGCCCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTCGAGCTGCTAAAGGACAGGATAGAGGAGCTGCAGGAGGAGTACGCGCAGTTACAGCGCGAACACAAAGAGAAGTGCTCCGCGCACGAGCGGCTGAAGCGCGAGCACGCGTCGCTGGAGCGCGAGGTGGCGCTGGCGCGCGACGCCGTGCGCGCGCGcgacgcggcggcggcggcggcgggccgCGCCTTCGTGGAGGcagccgccgcgcccgccgcgcccgccggcGCCGCCTGCGGCCGCGTGCCGCCGCTCGCGCTCGTCACGCGCGACAGCGAGCGCCTGCTGCACGACGCCGGCGAGGGCACGCTCGACGTGCGGCTGGAGCGGCTGGCGGGCGCGAAGGCGGCGCTGGAGGGCGAGGTGCGCAAGCTGAAGCTGCAGCTGAACGAGGAGCGCGCCGCCAGGCACAACGGCGTGGCGCACCTGCACCAGGACGTCGAGGCGGAGCTGGAGGCGCTGCGCAAGGCGGCGTCGGAGGCGaaggcgcgggcggcgcgcgcggagGCGGAGGCGGCGCTgcaggcggcggcggcggcgcgcgcggacGCGCAGGCGGCGCGGCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCTGCTCAAGCAGGAGCGCCGGCGTCTGCAGCGggagGCGAGAGAAGCGCTAAATCGAGTGGAAGAATTAGAAACCGAAAATAGCCATCTTACAAAACGCCTAGACAAATTGAAAAACGCTAAGTCTGCGCTATTAAAAGACCTGTGA
- Protein Sequence
- MGEQSFLATPENTDEESGDAFTDGDFGDSEEETVVERNLLKTAHMPINESVNSEIKVNSDIDCTDDSLDQTNGVQEFADLKEENMHLSDFANGDSSSDLRRDSQSDGSIVGILGDQHSHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKEKTVGRRTSSRLAVLSPSALHSPRRSSEDSDDVLSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEYAQLQREHKEKCSAHERLKREHASLEREVALARDAVRARDAAAAAAGRAFVEAAAAPAAPAGAACGRVPPLALVTRDSERLLHDAGEGTLDVRLERLAGAKAALEGEVRKLKLQLNEERAARHNGVAHLHQDVEAELEALRKAASEAKARAARAEAEAALQAAAAARADAQAARLRARQDHQDEHEELLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00781041;
- 90% Identity
- iTF_00213464; iTF_00248100;
- 80% Identity
- -