Haoe013984.1
Basic Information
- Insect
- Heliconius aoede
- Gene Symbol
- lrrfip2
- Assembly
- GCA_037355905.1
- Location
- JBAIZZ010000358.1:138309-147666[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-77 4.8e-73 246.2 21.0 1 261 122 376 122 402 0.91 2 2 1 2e+04 -5.7 10.2 1 39 402 440 400 450 0.84
Sequence Information
- Coding Sequence
- ATGGGTGAACGTTGTGAAATGGCTACTCCCGAAAACAGTGCCGATGAGAGTGGAGGTGCATTTACAGATGGTGATTTTGGTGATTCTGAGGAAGAAACTGTAGTAGGacataatttgattaaaactACACGTATGCCGGTTAATGAAAGTGTCAATGATGAAATTAAACTGAACAGTAGTATAGATTGTATAGACAATAGTTTAGACCGATCAAGTAGTGTACACGAGGACATTGatgatattaatgaaaatatgcaGCTCAATGACTTTATAAACGGTGATAACTCATCGGCGGATTTAGGAAGAGATTCACAAAGCGACAACGGCTCCATCGTTGGAATTCTTGGAGATCAACATAATcatGCGGAACAACGGCTGGCGGCGCGTCGTGCGGCGCGGGCGGAGGCGCGCGAGATCCGGATGCGGGAGCTGGAGCGTCAGCAGAGAGAACAAGAAGACCATGCTGATAAAGCGTACGACATGTACGCAGAAACGGTGGGAAGACGGACAGGCAGTCGGCTAGCGACGTTAAGTCCCAGCGTAATGCACTCTCCTCGGCGTAGTTCAGAGGACTCGGACGATGTTTTCAGCATCAAGGATCTTaggcatGAACTAAAAGAAGTAGAAGAGAAGTTCCGCAAGGCGATGATCCTTAATGCCCAATTAGACAATGACAAAGCGGCACTTGGATACCAGCTCGAGTTATTAAAGGATAGGATAGAGGAGTTACAGGAGGAATATGCGCAATTACAGcGCGAACACAAAGAAAAATGTTCATCACACGAACGTCTGAAACGTGAACACGCATCCTTAGAACGCGAAGTGTCACTCGCGAGGGACGCTGTGCGCGCGCGggacgccgccgccgccgctgcGGGACGCGCCTTCGTGGAGGCCGCCGCCGCGCCCGACGCGCCGCCCGGCGACCGCTGCGGCAGCGTGCCGCCGCTGGCGCTGGTGTCGCACACGTCCGAGCAGCTGCTCAACGACGCGGGGGAGGGGACGCTAGATGTGCGGCTCGAGCGTCTAGCAAGTGCTAAAGCAGAATTAGAAGGCGAAGTGCGTAAACTCAAGCTGCAGTTAAACGACGAGCGCGCGGCGAGGCAAAATGGCGTAGCGCATATGCACCGGGATATTGATGGCGAGTTGGAAACCCTCCGTAAATCGGTATCAGAGGCCAAAGGTCGCGCCGCCCGAGCGGAGGCCGAGGCGGCCATACAAGCGGCAGCAGTCGCACGGCTCGAGGCGCAAGTCGCGCGACTAAAGGCCAGGCAGGACCACCAAGACGAGCATGAGGAAATGCTGAAGCAGGAGAGGCGGAAGCTGCAGAGGGAGgaTGTAGTCGATTTCTGGGCCGTTATTAATAATGGTAGCTaa
- Protein Sequence
- MGERCEMATPENSADESGGAFTDGDFGDSEEETVVGHNLIKTTRMPVNESVNDEIKLNSSIDCIDNSLDRSSSVHEDIDDINENMQLNDFINGDNSSADLGRDSQSDNGSIVGILGDQHNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRTGSRLATLSPSVMHSPRRSSEDSDDVFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEYAQLQREHKEKCSSHERLKREHASLEREVSLARDAVRARDAAAAAAGRAFVEAAAAPDAPPGDRCGSVPPLALVSHTSEQLLNDAGEGTLDVRLERLASAKAELEGEVRKLKLQLNDERAARQNGVAHMHRDIDGELETLRKSVSEAKGRAARAEAEAAIQAAAVARLEAQVARLKARQDHQDEHEEMLKQERRKLQREDVVDFWAVINNGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00781041;
- 90% Identity
- iTF_00781847;
- 80% Identity
- -