Bsel021592.1
Basic Information
- Insect
- Boloria selene
- Gene Symbol
- lrrfip2_1
- Assembly
- GCA_905231865.2
- Location
- HG993135.1:1746226-1759937[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-75 3.4e-71 240.7 26.1 1 264 125 382 125 404 0.91 2 2 1 2.8e+04 -6.1 19.6 1 47 405 450 405 478 0.72
Sequence Information
- Coding Sequence
- ATGACGTTAAATATGGGCGAACAATCCTTTTTGGCCACTCCTGAAAACAGCGACGAAGAGAGTGGAGATGCTTTTACAGATGGTGATTTTGGTGATTCTGAAGAAGAGATTGTGGTAGAGCGTAATTTAGTAAAAACAGCACACATGCCTATCAATGAAAGTCTTAATTCTGAAATTAAAGTGAATAGTGATATCGATTGTACGGATGACAGTTTAGACCAAGCGAATGGTGTTCAAGAGAAATTCGCTGATTTGAAGGAAGAAAATATGCACTTAAGTGACTTTGCTAACGGTGACAGCTCATCCGACTTACGAAGAGATTCGCAAAGTGATGGCTCCATCGTTGGAATTCTCGGTGATCAGCATAATCACGCAGAACAACGACTAGCGGCGCGTCGTGCAGCGCGGGCGGAGGCGCGGGAGATCCGTATGCGCGAGTTGGAACGGCAGCAGCGCGAGCAAGAGGACCATGCTGATAAAGCGTATGATATGTACGCAGAGACGGTGGGAAGGCGGACAAGCAGTAGGCTAGCAGTGTTAAGCCCCAGCGCTCTACACTCGCCTCGGCGCAGTTCTGAGGATTCTGACGATGTGCTTAGCATCAAGGACCTTAGGCATGAACTAAAAGAAGTGGAGGAGAAGTTCCGCAAAGCGATGATCCTAAACGCCCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTCGAGTTGCTGAAGGACAGGATAGAGGAGCTGCAGGAGGAGTACGCGCAGTTACAGCGCGAGCACAAAGAGAAGTGCTCCTCGCACGAGCGACTAAAGCGCGAGCACGCGTCGCTAGAGCGCGAGGTAGCGATGGCGCGCGACGCCGTACGAGCTCGCGACGCGGCGGCGGCGGCGGCGGGTCGCGCGTTCGTGGAGGCGGCCGCCGCGCCCGCCGCGCCCGCCGGCGCCGCCTGCGGTCGCGTGCCGCCGCTCGCGCTCGTCACGCGCGACAGCGAGCGACTGCTAGATGACGCCGGCGAGGGCACGCTCGACGTGCGGCTGGAACGGCTAGCGGGCGCGAAGGCAGCGCTGGAGGGGGAGGTACGCAAGCTGAAGCTGCAGCTGAACGAGGAGCGCGCCGCGAGACAGAACGGCGTGGCGCATCTACACCAAGACGTCGAGGCGGAGCTGGAGGCGCTACGCAAGTCGGCGTCGGAGGCGAAGGCGCGTGCGGCGCGCGCGGAGGCGGAGGCGGCGCTGCAGGCGGCGGCGGCGGCGCGCGCGGACGCGCAGGCGGCGCGGCTGCGGGCGCGCCAGGACCACCAGGACGAGCACGAGGAGATGCTCAAGCAGGAGCGGCGCCGGCTCCAGCGCGAGGCGAGAGAAGCGCTAAATCGAGTAGAAGAATTAGAAACGGAAAATAGCCATCTTACAAAACGCCTGGACAAATTGAAAAACGCTAAGTCCGCGCTATTAAAAGACCTGTGA
- Protein Sequence
- MTLNMGEQSFLATPENSDEESGDAFTDGDFGDSEEEIVVERNLVKTAHMPINESLNSEIKVNSDIDCTDDSLDQANGVQEKFADLKEENMHLSDFANGDSSSDLRRDSQSDGSIVGILGDQHNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRTSSRLAVLSPSALHSPRRSSEDSDDVLSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEYAQLQREHKEKCSSHERLKREHASLEREVAMARDAVRARDAAAAAAGRAFVEAAAAPAAPAGAACGRVPPLALVTRDSERLLDDAGEGTLDVRLERLAGAKAALEGEVRKLKLQLNEERAARQNGVAHLHQDVEAELEALRKSASEAKARAARAEAEAALQAAAAARADAQAARLRARQDHQDEHEEMLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00781041;
- 90% Identity
- iTF_00212485;
- 80% Identity
- -