Djun009313.1
Basic Information
- Insect
- Dione juno
- Gene Symbol
- lrrfip2
- Assembly
- GCA_037127375.1
- Location
- JAXRJS010000041.1:12008588-12019464[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-77 3.8e-73 247.0 22.0 1 264 122 379 122 406 0.90 2 2 1 2.8e+04 -6.5 14.2 9 161 410 459 400 477 0.46
Sequence Information
- Coding Sequence
- ATGGGTGAGCGTTGTGAATTGGCTACACCTGAAAACAGTGACAATGAGAGTGGAGATGCTTTTACAGATGGTGACTTTGGTGATTCAGAGGAAGAAACGGTGGTAGAACGTAGCTCCATTAAAACCACACATATGCCTGTTAATGAAAGTGTTAATTCTGAGATTCAAGTGAAAAATAGTGTCGATTGTATAGATAATTGTTTAGACCAATCGAATAGTGTATATGACGAGTTTGATGatagtaatgaaaatatgCAGCCGAATGACTTTACAAACGGTGATAATTCATCGACGGATTTAAGAAGAGATTCTCAAAGCGACAACGGCTCCATTGTTGGAATTCTTGGAGATCAACATAATCATGCGGAGCAGCGTCTGGCGGCGCGTCGTGCAGCGCGGGCAGAGGCGCGCGAGATCCGCATGCGGGAGCTAGAGCGTCAGCAGCGCGAACAGGAGGACCATGCTGATAAAGCGTATGATATGTATTCCGaaaCAGTGGGAAGGAGGACGGGCAGTCGGCTAGCGACACTAAGCCCCAGCACATTGCATTCGCCACGTCGTAGTTCAGAGGATTCGGAAGATGTTCTTAGCATCAAGGACCTCAGGCACGAGCTAAAAGAAGTAGAAGAAAAATTCCGTAAGGCGATGATCCTAAATGCCCAACTAGACAACGACAAGGCGGCGCTCGGGTACCAACTAGAGTTGTTGAAGGATAGAATAGAAGAGCTGCAAGAGGAATATGCGCAATTACAGCGCGAACACAAGGAGAAGTGCTCGTCGCACGAGCGTCTGAAGCGCGAGCACGCGTCGCTGGAGCGCGAGGTGGCGCTGGCGCGGGACGCGGTGCGCGCGCGCgacgcggcggcggcggcggcgggccGCGCCTTCGTGGAGGCGGCGGCCGCGCCCGACGCGCCGCCCGGCGCGCGCTGCGGCCGCGTGCCGCCGCTCGCGCTCGTGTCGCACGGCTCCGAGCAGCTGCTCAACGACGCCGGCGAGGGCTCGCTCGACGTGCGGCTCGAGCGCCTGGCGAGCGCGAAGTCGTCGCTGGAGGGGGAGGTGCGCAAGCTGAAGCTGCAGCTGCACGAGGAGCGCGCGGCGCGGCACAACGGCGTGGCGCACCTGCACCGCGACGTGGACGGCGAGCTGGAGACCCTTCGCAAATCGGTGTCAGAAGCAAAAGGTCGCGCGGCTCGTGCGGAAGCCGAGGCGGCGATACAAGCGGCGGCGGTCGCGCGGCTGGAGGCGCAGGTCGCGCGGCTCAAGGCGAGGCAGGACCACCAGGACGAGCACGAGGAGATGCTCAAGCAGGAGAGGCGGAAGCTGCAGAGGGAGGCGAGAGAAGCTCTAAACCGAGTGGAAGAATTAGAAACAGAAAATAGCCATCTAACGAAACGTCTTGACAAATTGAAGAACGCCAAGTCCGCTCTATTAAAGGACCTGTGA
- Protein Sequence
- MGERCELATPENSDNESGDAFTDGDFGDSEEETVVERSSIKTTHMPVNESVNSEIQVKNSVDCIDNCLDQSNSVYDEFDDSNENMQPNDFTNGDNSSTDLRRDSQSDNGSIVGILGDQHNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYSETVGRRTGSRLATLSPSTLHSPRRSSEDSEDVLSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEYAQLQREHKEKCSSHERLKREHASLEREVALARDAVRARDAAAAAAGRAFVEAAAAPDAPPGARCGRVPPLALVSHGSEQLLNDAGEGSLDVRLERLASAKSSLEGEVRKLKLQLHEERAARHNGVAHLHRDVDGELETLRKSVSEAKGRAARAEAEAAIQAAAVARLEAQVARLKARQDHQDEHEEMLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00781041;
- 90% Identity
- iTF_00781847;
- 80% Identity
- -