Dtan001024.1
Basic Information
- Insect
- Drosophila tani
- Gene Symbol
- fru_1
- Assembly
- GCA_008042535.1
- Location
- VNJO01011674.1:268782-270857[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-12 1.2e-08 34.7 0.1 1 44 388 431 388 432 0.91 2 2 7.9 2.2e+04 -4.4 1.1 4 18 528 541 528 543 0.77
Sequence Information
- Coding Sequence
- ATGGGCGGCCCCACAGCGCCCGGCAGCACGGTGGCCAGCACCGGCGGAGGTGAGGTGGGTCAGACGTACTGCCTGCGCTGGAACAACCACCAGACGAACCTGGTACAGATCCTGCACGCCCTCCACGAGGTGGGCAGCTATGTGGACTGCACCCTGGTCGTCGACGATGAGCAGTTCCAGGCTCATCGCGTTGTCCTGGCGGCCAACTCGCCGTATTTCCAGCACATCCTGCGCGATGTGCCGCAGGATCACTGCAGCATCATTCTGCCCGGGGTCAAGGGCTTCGAGATTGCAGCCCTGCTGCAGTACATGTACACGGGCGAGACGACGGTGACCAAGAGCCAGGAGCCGGAGATCCTGCGCACCGCCAAGGAGCTGCAGGTCAAGGGACTCTACGATAACCTCATGAAGTTCAATCAccactccagctccagctctagTGCCACACCCACCTCGAGCTCAACGGCTGGCAAGCCCCTGAATGgcggcagccacagccactCCTCGTCCGTGATCTCCACATCCACCCACATCTCGCCCAGCGCCGCCATTTCGAGCAGCTGctcgccaccaccgccgccgccgcagttTGGCGGCTATCAGCCTGCCTTCAGTCACCACTATCCGCCGCAGTCGATGCCGGCGAGCAGCCAAGGTCCTTCGGGATCGGAGCCCCCCCTCACACCCACTCATGTGACGGCTCCGCCCTCTGGGGGACCGGCAGAGACGGGCGGTGGCCAGTGGCCCATGACCCCgtccgctgccgctgccatgCTGAACTCCGTTTACGAATCCGCCGCCGACATGAACCCGCTCAAGCGCAAGAAGCTGACGGCCATCTCAAGCATCCTGCTCAGCGGCAACCGCGACACACCGATCCTGCGCAATGTCCTGGCCCAGGCTAATCCCGCCGACTCCTCACAACCCGGACCGCTGATCATTAATGGCGAGAAGACGCCCACGCATCCGCACCAGAACCCGCAGCACTCTACGGCGGCCGGTGGGGTTGGAGTGAGTGGCGGCGAGCGGAATCACAGCTTCAATGGCTCCGACTATGGCGGCGACAAGGAGCCCCTGTCGCCGTACACCGATCGATCCTTCGAGGAGGAGAGCGGCCAGTCCGGCGGCAAGAAGCCGGAGTGGAAGCGCTACAAGCAGTACACGCGGGCGGACATGATGTGCGCCATCCAGGCGGTGCGCGAGGGCATGAGTGCGCTCCAGGCGAGTCGCAAGTACGGCCTGCCCAGCCGCACCCTCTACGACAAGGTGCGCAAGCTGAACATCACCACCGGACGGGGCACACATCGCACGCCCAAGCGTAGTCCTCCGGGGGCAGAGGCCTCGCAGGGATTCCCCTATtccgctgcagcggcagccgctgctgcccaCAACTATGGCCACGGGCATGTCCATCCCTCGGAGCTGAAGCGTGACCCGAAGGCGGATCATGTGCCCGCTCACCATGGCATGCCGCCCACCATTCCCCCCTCGGCGGCCGCTCTGCTGGACCATGCCTTCTTGCAGCAGGCTTTGGAGAATCGAGGCGGCGACATGGCCGGTCGGGAAGCCCTCCATGCCATGGCCCTGGCTGCCGCCGCACATGCTGCAGCCAATCGCATGTCCAGCAGTCCGGCGGAGACGGATCAACGCTCCAATGGCCATGGCATCCGATCGCCGAGTCCGGGCCGTCACTATCAGGACCAGGAGGCCATGGACCTGGAGATGGAGAAGCATGAGCAGCGCTTGATCAAGCGAGAGCGCGACCAGGACGAGCGCGAAGAcgccgacgacgaggaggatcaCGAGCAGGAGCATGTGGAGGATCTGTCGCTGGCGCGGAAGGAGCGACCTCCATCGCCCTACTCGCCCCAGGCTGAGACAGGAGCAGCTGGGGTGATCATGCATTCGGGCAGTGCCAATGGCAAGGAGCATGAGCGGGAGAGGGAGCATGAACGAGAGCGGGAGCGAGAGCAGGAGGACTACCCGCACTCGCCGCCGCCCTTTGCCATGGGCATGGGCCTGAAGCGGGAACTCCTCGAGGGCGAggaggcccaggcccaggcgcGGGCCGACTGA
- Protein Sequence
- MGGPTAPGSTVASTGGGEVGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFQAHRVVLAANSPYFQHILRDVPQDHCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHHSSSSSSATPTSSSTAGKPLNGGSHSHSSSVISTSTHISPSAAISSSCSPPPPPPQFGGYQPAFSHHYPPQSMPASSQGPSGSEPPLTPTHVTAPPSGGPAETGGGQWPMTPSAAAAMLNSVYESAADMNPLKRKKLTAISSILLSGNRDTPILRNVLAQANPADSSQPGPLIINGEKTPTHPHQNPQHSTAAGGVGVSGGERNHSFNGSDYGGDKEPLSPYTDRSFEEESGQSGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGAEASQGFPYSAAAAAAAAHNYGHGHVHPSELKRDPKADHVPAHHGMPPTIPPSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRMSSSPAETDQRSNGHGIRSPSPGRHYQDQEAMDLEMEKHEQRLIKRERDQDEREDADDEEDHEQEHVEDLSLARKERPPSPYSPQAETGAAGVIMHSGSANGKEHEREREHEREREREQEDYPHSPPPFAMGMGLKRELLEGEEAQAQARAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00590167;
- 90% Identity
- iTF_00606404; iTF_00527233; iTF_00533028; iTF_00489453; iTF_00489302; iTF_00533174; iTF_00527384; iTF_00540999; iTF_00541155; iTF_00594472; iTF_00594627; iTF_00485227; iTF_00485063; iTF_00491437; iTF_00491592; iTF_00488590; iTF_00488744; iTF_00571824; iTF_00571979; iTF_00525809; iTF_00613432; iTF_00569617; iTF_00569764; iTF_00490004; iTF_00490160; iTF_00561684; iTF_00561842; iTF_00524343; iTF_00524492; iTF_00590167; iTF_00590317; iTF_00483061; iTF_00609097; iTF_00482907; iTF_00609247; iTF_00477945; iTF_00478097; iTF_00593914; iTF_00593762; iTF_00617562; iTF_00617731; iTF_00492157; iTF_00492314; iTF_00612893; iTF_00612738; iTF_00480095; iTF_00480249; iTF_00531583; iTF_00531739;
- 80% Identity
- iTF_00606404;