Basic Information

Insect: Drosophila parvula
Gene Symbol: fru
Assembly: GCA_018904695.1
Location: JAEIIG010034681.1:11149-13266[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 4.6e-12 1.1e-08 34.7 0.1 1 44 395 438 395 439 0.91

2 2 8 1.8e+04 -4.5 1.1 4 18 535 548 535 550 0.77

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	4.6e-12	1.1e-08	34.7	0.1	1	44	395	438	395	439	0.91
2	2	8	1.8e+04	-4.5	1.1	4	18	535	548	535	550	0.77

Sequence Information

Coding Sequence: ATGGGCGGTCCCACAGCGCCCGGTAGCACGGTCGCCAGCAGCGGCGCTGGCGGCGGCGAGGTGGGCCAGACGTACTGTCTGCGCTGGAACAACCACCAGACGAACCTGGTGCAGATCCTGCACGCCCTACACGAGGTGGGCAGCTATGTGGACTGCACCCTGGTCGTCGACGACGAGCAGTTCCAGGCCCATCGCGTCGTCCTGGCTGCCAACTCGCCGTATTTCCAGCACATCCTTCGCGATGTACCGCAGGATCACTGCAGCATCATCCTGCCTGGGGTCAAGGGCTTTGAAATTGCGGCCCTGCTGCAGTACATGTACACGGGCGAGACGACGGTGACCAAGAGCCAGGAGCCGGAGATCCTGCGCACCGCCAAGGAGCTGCAGGTCAAGGGGCTCTACGACAACCTGATGAAGTTCAATCATCACTCCAGCTCCAGCGCCAGTGCCACGCCCACCTCGAGCTCGACGGCAGGCGGCAAGCCGCTGAACGGCGGCAGCCACAGCCACTCCTCATCCGTGATCTCCACATCCACCCACATCTCGCCCAGCGCCGCCATCTCGAGCAGCTGCTCGCCACCACCTCCGCCGCCGCCTCAGTTCGGCGGCTATCAGCCCGCCTTCAGTCACCACTATCCGCCGCAGTCACTGCCGGCCAACAGCCAAGGTCCTGCCGGCTCGGAGCCCCCCCTGACGCCCACCCATGTGTCGGCACCGCCCTCAGGCGCATCAACGGAGACGGGCGGTGGCGGCCAGTGGCCCATGACCCCGTCCGCAGCCGCTGCCATGTTGAACTCCGTTTACGAATCCGCTGCCGACATGAATCCCCTTAAGCGCAAGAAGCTGTCGGCCATTTCGAGCATGCTGCTCAGCGGCAACCGCGACACGCCGATCCTGCGCAATGTCCTGGCCCAGGCCAATCCTGCCGACTCCTCCCAGCCCGGACCGCTCATCCTCAACGGCGAGAAGACGCCAACCCATCCACACCAGAATCCCCAGCACTCGACTGCCGGCGGAGTGGGAGTGAGTGGCGGAGGCGGCGGCGAGAGGAACCACAGCTTCAATGGGTCCGACTATGGCGGCGACAAGGAGCCCCTTTCCCCGTACACGGATCGCTCCTTCGAGGAGGAGAGCGGCCAGTCCGGCGGAAAGAAGCCGGAATGGAAGCGCTACAAGCAATACACGCGGGCGGACATGATGTGCGCCATCCAGGCGGTGCGCGAGGGCATGAGTGCGCTCCAGGCGAGCCGAAAGTACGGCCTGCCCAGTCGCACCCTCTACGACAAGGTGCGCAAGCTGAACATCACCACGGGCCGTGGTACACATCGCACCCCGAAGCGCAGTCCCCCCGGAGCGGAGGCCTCGCAGGGATTCCCCTATTCCGCTGCTGCGGCAGCCGCTGCTGCCCACAACTATGGCCATGGACACGTGCATCCCTCGGACCTGAAGCGTGACCCGAAGGGGGATCATGTGCCCGCTCACCATGGCATGCCGCCCACCATTCCCCCCTCGGCCGCGGCTCTGCTGGACCATGCCTTCCTGCAGCAGGCTCTGGAGAACCGAGGCGGCGACATGGCCGGACGGGAGGCCCTCCATGCCATGGCCCTGGCTGCTGCTGCCCATGCCGCGGCCAATCGCATGTCCAGCAGTCCGGCTGACACGGATCAGCGTTCCAATGGCCATGGCATGCGATCGCCGAGTCCCGGCCGTCACTATCAGGACCAGGAGGCCATGGACCTGGAGATGGAGAAGCACGAGCAGCGTTTAATCAAGCGAGAGCGCGACCAGGACGAGCGCGAAGATGCCGACGACGAGGAAGATCAGGAGCAGGAGCACGTGGAGGATCTGTCGCTGGCTAGGAAGGAGCGACCCCCCTCGCCCTACTCGCCGCAGCCGCCCCAGGTGGGAGGAGAAGCTGCCGGCGTGATCATGCATGCCAGCAGTGCGTCGGCCAACGGCAAGGAGCATGAGCACGAACAGGAGCGGGAGCGGGAGCGGGAGCGGGAGCGAGAGCAGGAGGACTACCCGCACTCGCCGCCGCCCTTCGCCTTGGGCATGGGTCTGAAGCGGGAGCTCATCGAGGGCGAGGAGGCCCAGGCCCAGGCGCGGGCCGACTGA
Protein Sequence: MGGPTAPGSTVASSGAGGGEVGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFQAHRVVLAANSPYFQHILRDVPQDHCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHHSSSSASATPTSSSTAGGKPLNGGSHSHSSSVISTSTHISPSAAISSSCSPPPPPPPQFGGYQPAFSHHYPPQSLPANSQGPAGSEPPLTPTHVSAPPSGASTETGGGGQWPMTPSAAAAMLNSVYESAADMNPLKRKKLSAISSMLLSGNRDTPILRNVLAQANPADSSQPGPLILNGEKTPTHPHQNPQHSTAGGVGVSGGGGGERNHSFNGSDYGGDKEPLSPYTDRSFEEESGQSGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGAEASQGFPYSAAAAAAAAHNYGHGHVHPSDLKRDPKGDHVPAHHGMPPTIPPSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRMSSSPADTDQRSNGHGMRSPSPGRHYQDQEAMDLEMEKHEQRLIKRERDQDEREDADDEEDQEQEHVEDLSLARKERPPSPYSPQPPQVGGEAAGVIMHASSASANGKEHEHEQEREREREREREQEDYPHSPPPFALGMGLKRELIEGEEAQAQARAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00525809;
90% Identity: iTF_00606236;
80% Identity: iTF_00569764;