Basic Information

Insect: Drosophila rufa
Gene Symbol: fru
Assembly: GCA_018153105.1
Location: JAECXS010000002.1:5281414-5283483[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 4.5e-12 8.6e-09 34.8 0.1 1 44 390 433 390 434 0.91

2 2 7.9 1.5e+04 -4.4 1.1 4 18 530 543 530 545 0.77

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	4.5e-12	8.6e-09	34.8	0.1	1	44	390	433	390	434	0.91
2	2	7.9	1.5e+04	-4.4	1.1	4	18	530	543	530	545	0.77

Sequence Information

Coding Sequence: ATGGGCGGCCCCACAGCGCCCGGCAGCACGGTCGCCAGCAGCGGCGTCGGTGGCGGAGGCGAGGTGGGTCAGACGTACTGCCTGCGCTGGAACAACCACCAGACGAACCTGGTACAGATCCTGCACGCCCTCCACGAGGTGGGCAGCTATGTGGACTGCACCCTGGTCGTCGACGACGAGCAGTTCCAGGCCCATCGCGTCGTCCTGGCGGCCAACTCGCCGTATTTCCAGCACATCCTGCGCGATGTGCCGCAGGATCACTGCAGCATCATCCTGCCCGGAGTGAAGGGCTTCGAGATTGCGGCCCTGCTGCAGTACATGTACACGGGCGAGACGACGGTGACCAAGAGCCAGGAGCCGGAGATCCTGCGCACCGCCAAGGAGCTGCAGGTCAAGGGGCTCTACGACAACCTGATGAAGTTCAATCACCACTCCAGCTCCAGCTCCAGTGCCACGCCCACCTCGAGCTCGACGGCAGGCAAGCCGCTGAATGGCGGCAGCCACAGCCACTCCTCGTCCGTGATCTCCACATCCACCCACATCTCGCCCAGCGCCGCCATCTCGAGCAGCTGCTCGCCACCACCGCCGCCGCCGCAGTTCGGCGGCTATCAGCCCGCCTTCAGTCACCACTATCCGCCGCAGTCGCTGCCGGCGAGCAGCCAAGGTCCTTCGGGATCGGAGCCCCCCCTAACGCCCACCCATGTGACGGCTCCGCCCTCTGGGGGACCGACGGAGACGGGCGGTGGCCAGTGGCCCATGACCCCGTCCGCTGCCGCTGCCATGCTGAACTCCGTTTACGAATCCGCCGCCGACATGAATCCCCTCAAGCGCAAGAAGCTGACGGCCATCTCGAGCATACTGCTCAGCGGCAACCGCGACACACCGATCCTGCGCAATGTCCTGGCCCAGGCCAATCCCGCCGACTCCTCGCAACCCGGACCGCTGATCATCAATGGCGAGAAGACGCCCACGCATCCGCACCAGAACCCGCAGCACTCGACGGCCGGCGGCGTGGGTGTGAGTGGCGGCGAGCGGAATCACAGCTTCAATGGCTCCGACTATGGCGGCGACAAGGAACCGCTGTCGCCGTACACCGATCGATCCTTCGAGGAGGAGAGCGGCCAGTCCGGCGGCAAGAAGCCGGAGTGGAAGCGCTACAAGCAGTACACGCGGGCGGACATGATGTGCGCCATCCAGGCGGTGCGCGAGGGCATGAGTGCGCTCCAGGCGAGTCGCAAGTACGGCCTGCCCAGCCGCACCCTCTACGACAAGGTGCGCAAGCTGAACATCACCACGGGCCGCGGCACACATCGCACGCCCAAGCGTAGTCCTCCTGGGGCAGAGGCCTCGCAGGGATTCCCCTATTCCGCCGCAGCGGCAGCCGCTGCTGCCCACAACTATGGCCACGGGCATGTCCATCCCTCGGAGCTGAAGCGTGACCCGAAGGCGGATCATGTGCCCGCTCACCACGGCATGCCGCCCACCATTCCCCCCTCGGCGGCCGCTCTGCTGGACCATGCCTTCCTGCAGCAGGCTCTGGAGAACCGGGGAGGCGACATGGCCGGTCGGGAGGCCCTCCATGCCATGGCCCTGGCTGCCGCCGCCCATGCCGCGGCCAATCGCATGTCCAGCAGCCCGGCGGAGACGGATCAGCGCTCCAATGGCCATGGCATGCGATCGCCGAGTCCCGGCCGCCACTATCAGGACCAGGAGGCCATGGACCTGGAGATGGAGAAGCACGAGCAGCGGCTGATCAAGCGAGAGCGCGACCAGGACGAGCGCGAAGACGCCGACGACGAGGAGGATCACGAGCAGGAGCATGTGGAGGATCTGTCGCTGGCGCGGAAGGAGCGACCCCCATCGCCCTACTCCCCGCAGCCCCAGGCTGAGGCAGGAGCAGCTGGGGTGATCATGCATTCGGGCAGTGCCAATGGCAAGGAGCATGAGCGGGAGCGGGAGCGGGAGCAAGAGGATTACCCGCACTCGCCGCCGTCCTTCGCCATGGGCATGGGCCTGAAGCGGGAACTGCTCGAGGGCGAGGAGGCCCAGGCCCAGGCGCGGGCCGACTGA
Protein Sequence: MGGPTAPGSTVASSGVGGGGEVGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFQAHRVVLAANSPYFQHILRDVPQDHCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHHSSSSSSATPTSSSTAGKPLNGGSHSHSSSVISTSTHISPSAAISSSCSPPPPPPQFGGYQPAFSHHYPPQSLPASSQGPSGSEPPLTPTHVTAPPSGGPTETGGGQWPMTPSAAAAMLNSVYESAADMNPLKRKKLTAISSILLSGNRDTPILRNVLAQANPADSSQPGPLIINGEKTPTHPHQNPQHSTAGGVGVSGGERNHSFNGSDYGGDKEPLSPYTDRSFEEESGQSGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGAEASQGFPYSAAAAAAAAHNYGHGHVHPSELKRDPKADHVPAHHGMPPTIPPSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRMSSSPAETDQRSNGHGMRSPSPGRHYQDQEAMDLEMEKHEQRLIKRERDQDEREDADDEEDHEQEHVEDLSLARKERPPSPYSPQPQAEAGAAGVIMHSGSANGKEHEREREREQEDYPHSPPSFAMGMGLKRELLEGEEAQAQARAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00590317; iTF_00527233; iTF_00489453; iTF_00489302; iTF_00527384; iTF_00604769; iTF_00604934; iTF_00602509; iTF_00602682; iTF_00505329; iTF_00505483; iTF_00511932; iTF_00512087; iTF_00494312; iTF_00494467; iTF_00491437; iTF_00491592; iTF_00488590; iTF_00488744; iTF_00571824; iTF_00571979; iTF_00507539; iTF_00507691; iTF_00529491; iTF_00529644; iTF_00565460; iTF_00565300; iTF_00483061; iTF_00609097; iTF_00482907; iTF_00609247; iTF_00533174; iTF_00533028; iTF_00477945; iTF_00478097; iTF_00593914; iTF_00593762; iTF_00605659; iTF_00605499; iTF_00606236; iTF_00606404; iTF_00612893; iTF_00612738; iTF_00480095; iTF_00480249; iTF_00486495; iTF_00486644; iTF_00531583; iTF_00531739; iTF_00588064; iTF_00588227;
90% Identity: iTF_00606236;
80% Identity: iTF_00590317;