Basic Information

Insect: Drosophila pectinifera
Gene Symbol: fru
Assembly: GCA_008042775.1
Location: VNKC01000580.1:57966-60074[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.6e-12 9.1e-09 34.7 0.1 1 44 390 433 390 434 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.6e-12	9.1e-09	34.7	0.1	1	44	390	433	390	434	0.91

Sequence Information

Coding Sequence: ATGGGCGGCCCCACAGCGCCCGGCAGCACGGtcgccagcagcggcggcgtcggTGGCGGAGGTGAGGTGGGCCAGACGTACTGCCTGCGCTGGAACAACCACCAGACGAACTTGGTACAGATCCTGCACGCCCTGCACGAGGTGGGCAGCTATGTGGACTGCACCCTGGTCGTCGACGACGAGCAGTTCCAGGCCCATCGCGTTGTCCTGGCGGCCAACTCGCCGTATTTCCAGCACATTTTGCGCGATGTGCCCCAGGATCACTGCAGCATCATCCTGCCGGGAGTCAAGGGCTTCGAGATAGCTGCCCTGCTACAGTACATGTACACGGGGGAGACGACGGTGACCAAGAGCCAGGAGCCGGAAATCCTGCGCACCGCCAAGGAGCTGCAGGTCAAGGGACTCTACGACAACCTCATGAAGTTCAATCAtcactccagctccagctccagtgccacgcccacctcaAGCTCGGCAGCTGGGAAACCGCTGAATGgaggcagccacagccacagccactcCTCGTCCGTGATCTCCACATCCACCCACATCTCGCCCAGCGCCGCCATCTCGAGCAGCTGctcgccaccaccgccgccgccccagTTTGGCGGCTATCAGCCCGCCTTCAGTCACTATCAGCCGCAGTCGCTGCCGGCGAACAGCCAAGGACCTGCTGGTTCGGAGCCCCCCTTGACACCCACTCATGTGACGGCACCGCCCTCGGGTCCGGCGGAGACGGGCGGTGGCCAGTGGCCCATGACCccgtccgccgccgccgccatgcTGAACTCCGTTTACGAATCCGCCGCCGACATGAATCCCCTCAAGCGCAAGAAGCTGTCGGCCATCTCGAGCATGCTGCTCAGCGGCAATCGCGACACTCCCATCCTGCGCAACGTCCTTGCTCAGGCCAATCCCGCCGACTCCTCGCAGCCCGGACCGCTGAGCATTAATGGCGAGAAGACGCCCACGCATCCGCACCAGAATCCACAGCACTCGACCGCCGGAGTGGGAGTGAGTGGCGGCGAGCGGAACCACAGCTTCAATGGCTCCGATTATGGCGGCGACAAGGAGCCCCTCTCCCCGTACACCGACCGATCCTTCGAGGAGGAGAGCGGCCAGTCCGGAGGCAAGAAGCCGGAGTGGAAGCGCTACAAGCAGTACACGCGGGCGGACATGATGTGCGCCATCCAGGCGGTGCGCGAGGGCATGAGCGCGCTCCAGGCGAGTCGGAAGTACGGCCTGCCCAGTCGCACCCTCTACGACAAGGTGCGCAAGCTGAACATCACCACGGGCCGGGGCACACATCGCACGCCAAAGCGTAGTCCTCCCGGGGCAGAGGCCTCCCAGGGATTCCCCTAttccgctgcagcagccgctgctgcagcccACAACTACGGCCATGGACATGTACATCCCTCGGAGCTGAAGCGTGACCCGAAGACGGATCATGTGCCCGCTCACCACGGCATGCCGCCCACCATTCCTCCTTCGGCGGCCGCTCTGCTGGACCATGCCTTCCTGCAGCAGGCCCTGGAGAACCGAGGCGGCGACATGGCGGGCCGGGAGGCACTCCATGCCATGGCCTTGGCCGCTGCTGCCCATGCCGCAGCCAATCGCATGTCCAGTAGTCCGACGGAGACGGATCAGCGTTCCAATGGCCACGGCATGCGATCGCCCAGTCCCGGCCGTCACTACGGTGGTCAGGACCAGGAGGCCATGGACCTGGAGATGGAGAAGCACGAGCAGCGCTTGATCAAGCGAGAGCGCGACCAGGATGAGCGCGAGGAcgccgacgacgaggaggatcACGAGCAGGAGCATGTGGAGGATCTGTCGCTGGCGAGGAAGGAGCGACCCCCATCGCCCTACTCGCCACTGCCGCCGGCTGAGCCAGGAGTGGCTGGGGTGATCATGCATGCCAGCGGTGCGCCAGCCAACGGCAAGGAGCATGAGCACGAGCGGgaacgagagcgagagcgagagcgggagcgggagcgggagcgagaGGACTACCCGCACTCGCCGCCGTTTGCCATGGGCATGGACCTGAAGCGGGAGCTGCTAGAGGGCGAggaggcccaggcccaggcgcGGGCCGACTGA
Protein Sequence: MGGPTAPGSTVASSGGVGGGGEVGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFQAHRVVLAANSPYFQHILRDVPQDHCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHHSSSSSSATPTSSSAAGKPLNGGSHSHSHSSSVISTSTHISPSAAISSSCSPPPPPPQFGGYQPAFSHYQPQSLPANSQGPAGSEPPLTPTHVTAPPSGPAETGGGQWPMTPSAAAAMLNSVYESAADMNPLKRKKLSAISSMLLSGNRDTPILRNVLAQANPADSSQPGPLSINGEKTPTHPHQNPQHSTAGVGVSGGERNHSFNGSDYGGDKEPLSPYTDRSFEEESGQSGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGAEASQGFPYSAAAAAAAAHNYGHGHVHPSELKRDPKTDHVPAHHGMPPTIPPSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRMSSSPTETDQRSNGHGMRSPSPGRHYGGQDQEAMDLEMEKHEQRLIKRERDQDEREDADDEEDHEQEHVEDLSLARKERPPSPYSPLPPAEPGVAGVIMHASGAPANGKEHEHEREREREREREREREREDYPHSPPFAMGMDLKRELLEGEEAQAQARAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00590167;
90% Identity: iTF_00606236;
80% Identity: iTF_00571979;