Dtsa014059.1
Basic Information
- Insect
- Drosophila tsacasi
- Gene Symbol
- -
- Assembly
- GCA_018904565.1
- Location
- JAEIHY010017966.1:35797-37908[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-12 1.3e-08 34.7 0.1 1 44 398 441 398 442 0.91 2 2 9 2.2e+04 -4.5 1.1 4 18 538 551 538 553 0.77
Sequence Information
- Coding Sequence
- ATGGGCGGCCCCACAGCGCCCGGCAGCACGGTCGCCAGCAGCGGTGGCGCAGGCGGCGAGGTGGGTCAGACCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTACGACAACCTGATGAAGTTCAATCATCATGCCAGCTCCAGTGCCACGCCCACCTCGAGTTCGACGGCTGGTGGGAAACCCCTTAACGGAGGCAGCCACAGCCACTCCTCGTCCGTGATCTCCACATCCACCCACATTTCGCCCAGTGCCGCCATCTCGAGCAGCTGCTCGCCACCACCACCACCGCCGCCCCAGTTTGGCGGCTACCAGCCCGCCTTCAGTCACCACTATCCGCCGCAGTCGCTGCCGGCGAGCAGCCAAGGTCCTGCCGGTTCGGAGCCCCCGCTGACACCCACCCATGTGACGGCGCCACCCTCATCGGGACCCTCATCGGACGCGGGAGCTGGCGGCCAATGGCCCATGACCCCGTCCGCTGCCGCTGCCATGCTGAACTCCGTTTACGAATCCGCCGCCGATATGAATCCCCTCAAGCGCAAGAAGCTGTCGGCCATCTCAAGCATGCTGCTCAGCGGCAATCGCGACACACCGATCCTGCGCAATGTCCTGGCCCAGGCGAATCCCGCTGACTCCTCGCAACCGGGCCCTCTGATCCTCAATGGCGAGAAGACCCCCACGCATCCGCACCAGAATACCCAGCACTCGACGGCCGGCGGAGTGGGTGTGAGTGGAGGCGGCGGCGGCGTCGGTGGTGGCGAGAGGAACCATAGCTTCAATGGCTCCGATTATGGTGGCGACAAGGAGCCCCTGTCCCCGTACACCGATCGATCCTTCGAGGAGGAGACCGGCCAGTCTGGCGGCAAGAAGCCGGAGTGGAAGCGCTACAAGCAGTACACGCGGGCGGACATGATGTGCGCCATCCAGGCGGTGCGCGAGGGCATGAGTGCGCTCCAGGCGAGCCGCAAGTACGGCCTGCCCAGTCGCACCCTGTACGACAAGGTGCGCAAGCTGAACATCACCACAGGCCGGGGCACCCACCGCACCCCGAAGCGCAGTCCTCCCGGGGCGGAGGCCTCGCAGGGATTCCCCTATTCGGCGGCCGCAGCAGCTGCGGCTGCCCACAACTATGGCCATGGACACGTGCATCCCTCGGAGCTGAAGCGTGACCCGAAGGGCGACCATGTGCCCGCCCACCACGGCATGCCGCCCACCATTCCCCCCTCGGCGGCCGCCCTGCTGGATCACGCCTTCCTGCAGCAGGCCCTGGAGAACCGAGGCGGCGACATGGCTGGTCGCGAAGCTCTCCATGCCATGGCCTTGGCCGCCGCAGCCCATGCCGCGGCCAATCGCATGTCCAGCAGTCCCGCGGACACGGATCAGCGTTCCAATGGCCATGGCATGCGATCGCCGAGTCCTGGCCGGCACTATCAGGACCAGGAGGCCATGGACCTGGAGATGGAAAAGCATGAGCAGCGCTTAATCAAGCGAGAGCGCGACCAGGATGAGCGCGAAGACGCTGACGATGAGGAGGATCACGAGCAGGAGCATGTGGAGGATCTGTCGCTGGCGAGAAAGGAGCGACCCCCATCGCCCTACTCCCCACAGCCGCCACAGGTGGAGGGAGGAGGAGCTGCCGGGGTGATCATGCACGCCAGCAGTGCCAACGGCAAGGAGCACGAGCATGAGCATGAGCAGGAGCGAGAGCGGGAGCAGGAGGACTATCCACACTCGCCGCCACCCTTCGCCCTGGGCATGGGCCTCAAGCGGGAACTCATCGAGGGCGAAGAGGCCCAGGCCCAGGCGCGGGCCGACTGA
- Protein Sequence
- MGGPTAPGSTVASSGGAGGEVGQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDNLMKFNHHASSSATPTSSSTAGGKPLNGGSHSHSSSVISTSTHISPSAAISSSCSPPPPPPPQFGGYQPAFSHHYPPQSLPASSQGPAGSEPPLTPTHVTAPPSSGPSSDAGAGGQWPMTPSAAAAMLNSVYESAADMNPLKRKKLSAISSMLLSGNRDTPILRNVLAQANPADSSQPGPLILNGEKTPTHPHQNTQHSTAGGVGVSGGGGGVGGGERNHSFNGSDYGGDKEPLSPYTDRSFEEETGQSGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGAEASQGFPYSAAAAAAAAHNYGHGHVHPSELKRDPKGDHVPAHHGMPPTIPPSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRMSSSPADTDQRSNGHGMRSPSPGRHYQDQEAMDLEMEKHEQRLIKRERDQDEREDADDEEDHEQEHVEDLSLARKERPPSPYSPQPPQVEGGGAAGVIMHASSANGKEHEHEHEQEREREQEDYPHSPPPFALGMGLKRELIEGEEAQAQARAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00525809;
- 90% Identity
- iTF_00606236;
- 80% Identity
- -