Dbur007172.1
Basic Information
- Insect
- Drosophila burlai
- Gene Symbol
- fru
- Assembly
- GCA_008042655.1
- Location
- VNJT01001560.1:10793-12943[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-12 1.1e-08 34.7 0.1 1 44 404 447 404 448 0.91 2 2 8 1.9e+04 -4.9 1.1 4 17 544 556 544 558 0.74
Sequence Information
- Coding Sequence
- ATGGGCGGCCCCACAGCGCCCGGTAGCACGGTagccagcagcggcggcgcagGCGGCGAGGTGGGTCAGACCTACTGCCTGCGCTGGAACAACCACCAGACGAACCTGGTACAGATCCTGCATGCCCTGCACGAGGTGGGCAGCTATGTGGACTGCACCCTGGTCGTCGACGACGAGCAGTTCCAGGCCCATCGCGTTGTCCTGGCCGCCAACTCGCCGTATTTCCAGCACATTTTGCGCGATGTGCCGCAGGATCACTGCAGCATCATCCTGCCCGGTGTCAAGGGCTTCGAAATTGCTGCCCTGCTGCAGTACATGTACACGGGGGAGACGACGGTGACCAAGAGCCAGGAGCCAGAGATCCTGCGCACCGCCAAGGAGCTGCAGGTCAAGGGGCTCTACGACAACCTGATGAAGTTCAATCATCATGCCAGctccagtgccagtgccacgcccacctcgAGCTCGACGGCGGGTGCGAAACCCCTAAATGGaggcagccacagccacagccacagccactcCTCGTCCGTGATCTCCACATCCACCCACATTTCGCCCAGTGCCGCCATCTCGAGCAGCTGctcgccaccaccaccaccgccgccgcagtTTGGCGGCTTCCAGCCCGCCTTCAGTCACCACTATCCGCCGCAGTCGCTGCCGGCGAGCAGCCAAGGTCCTGCCGGTTCGGAGCCCCCACTGACACCCACTCATGTGACGGCGCCGCCCTCATCGGGACCATCAACGGACGTCGGAGCTGGCGGCCAATGGCCCATGACCCCgtccgctgccgctgccatgCTGAACTCCGTTTACGAATCCGCCGCCGATATGAATCCCCTCAAGCGCAAGAAGCTGTCGGCCATCTCGAGCATGCTGCTCAGCGGCAATCGCGACACACCGATCCTGCGCAATGTCCTGGCCCAGGCCAATCCCGCTGACTCCTCGCAACCGGGACCTCTGATCCTCAATGGCGAGAAGACCCCCACGCATCCGCACCAGAATCCCCAGCATTCGACGGCCGGCGGAGTGGGTGTGAGTGGAGGCGgtggaggtggcggcggcggagagAGGAACCATAGCTTCAATGGCTCCGATTATGGTGGCGACAAGGAGCCCCTCTCCCCGTACACCGATCGGTCCTTCGAGGAGGAGACCGGCCAGTCGGGCGGCAAGAAGCCCGAATGGAAGCGCTACAAGCAGTACACGCGGGCGGACATGATGTGCGCCATCCAGGCGGTGCGCGAGGGCATGAGTGCGCTGCAGGCGAGCCGCAAGTACGGCCTGCCCAGTCGCACCCTTTACGACAAGGTGCGCAAGCTGAACATCACCACCGGCAGGGGCACCCATCGCACCCCGAAGCGTAGTCCGCCCGGGGCGGAGGCCTCGCAGGGATTCCCCTATTCGgcggccgcagcagctgcggctgccCACAACTATGGCCATGGACACGTGCATCCCTCGGAGCTGAAGCGTGACCCGAAGGGCGATCATGTGGCCGCTCACCATGGCATGCCGCCCACCATTCCCCCCTCGGCGGCCGCCCTGCTGGATCATGCCTTCCTGCAGCAGGCTCTGGAGAACCGAGGCGGCGACATGGCCGGCCGCGAGGCTCTCCATGCCATGGccttggccgccgccgcccatgcTGCGGCCAATCGCATGTCCAGCAGTCCGGCGGACATGGATCAGCGTTCCAATGGCCACGGCATGCGATCGCCGAGTCCTGGCCGTCACTATCAGGACCAAGAGGCCATGGACCTGGAGATGGAGAAGCATGAGCAGCGTTTGATCAAACGAGAGCGCGACCAGGATGAGCGCGAAGACGCTGACGATGAGGAGGATCACGAGCAGGAGCATGTGGAGGATCTGTCGCTGGCGAGGAAGGAGCGACCCCCATCGCCCTACTCCCCGCAGCCGCCACAGAtggagggaggaggaggagctgccgggGTGATCATGCATGCCAGCAGTGCCAACGGCAAGGAGAACGAGCATGAGCATGAGcgggagcgagagcgagagcgggagcgggaacgggagcagGAGGACTATCCACACTCGCCGCCACCCTTCGCCCTGGGCATGGGCCTCAAGCGGGAACTCATCGAGGGCGAggaggcccaggcccaggcgcGAGCCGACTGA
- Protein Sequence
- MGGPTAPGSTVASSGGAGGEVGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFQAHRVVLAANSPYFQHILRDVPQDHCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHHASSSASATPTSSSTAGAKPLNGGSHSHSHSHSSSVISTSTHISPSAAISSSCSPPPPPPPQFGGFQPAFSHHYPPQSLPASSQGPAGSEPPLTPTHVTAPPSSGPSTDVGAGGQWPMTPSAAAAMLNSVYESAADMNPLKRKKLSAISSMLLSGNRDTPILRNVLAQANPADSSQPGPLILNGEKTPTHPHQNPQHSTAGGVGVSGGGGGGGGGERNHSFNGSDYGGDKEPLSPYTDRSFEEETGQSGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGAEASQGFPYSAAAAAAAAHNYGHGHVHPSELKRDPKGDHVAAHHGMPPTIPPSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRMSSSPADMDQRSNGHGMRSPSPGRHYQDQEAMDLEMEKHEQRLIKRERDQDEREDADDEEDHEQEHVEDLSLARKERPPSPYSPQPPQMEGGGGAAGVIMHASSANGKENEHEHEREREREREREREQEDYPHSPPPFALGMGLKRELIEGEEAQAQARAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00525809;
- 90% Identity
- iTF_00606236;
- 80% Identity
- iTF_00492314;