Basic Information

Insect: Drosophila mayri
Gene Symbol: fru_1
Assembly: GCA_008042485.1
Location: VNJN01004598.1:80642-82735[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 4.6e-12 9.1e-09 34.7 0.1 1 44 394 437 394 438 0.91

2 2 8 1.6e+04 -4.5 1.1 4 18 534 547 534 549 0.77

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	4.6e-12	9.1e-09	34.7	0.1	1	44	394	437	394	438	0.91
2	2	8	1.6e+04	-4.5	1.1	4	18	534	547	534	549	0.77

Sequence Information

Coding Sequence: ATGGGCGGCCCCACAGCCCCCGGCAGCACGGTCGCCAGCAGCGGCGGAGGCGGTGAGGTGGGTCAGACCTACTGCCTGCGCTGGAATAACCACCAGACGAACCTGGTACAGATCCTGCATGCCCTGCACGAGGTGGGCAGCTATGTGGACTGCACTTTGGTCGTCGACGACGAGCAGTTCCAGGCCCATCGCGTTGTCCTGGCCGCCAATTCGCCGTATTTCCAGCACATCCTGCGGGATGTGCCTCAGGATCACTGCAGCATTATCCTGCCCGGCGTCAAGGGCTTTGAGATTGCCGCTCTGCTGCAGTACATGTACACGGGCGAGACGACGGTGACCAAGAGCCAGGAGCCGGAGATCCTGCGCACAGCCAAGGAGCTGCAAGTCAAGGGACTCTACGACAACCTCATGAAGTTCAATCATCATGCCAGctccagtgccagtgccacgcccacctcgAGCTCATCTGGGAAACCCCTAAATGGGGGCAGCCACAGCCACTCCTCGTCCGTGATCTCCACATCCACCCACATTTCGCCCAGCGCCGCCATCTCGAGCAGCTGctcgccaccaccaccgccaccgcctcaGTTTGGCGGCTACCAGCCCGCCTTCAGTCATCACTATCCGCCGCAGTCGCTGCCGGCGAGCAGCCAAGGTCCTGCCGGTTCGGAGCCACCGCTGACACCCACCCATGTGACGGCGCCACCCTCGTCGGGACCGTCGTCGGAAGCGGGCGCCGGGGGCCAATGGCCCATGACCCcgtccgctgccgctgccatgCTGAACTCTGTTTACGAATCCGCCGCCGATATGAATCCCCTCAAGCGCAAGAAGCTGTCCGCCATCTCGAGCATGCTGCTCAGCGGCAATCGTGACACACCGATCCTGCGCAATGTCCTGGCCCAAGCTAATCCCGCTGACTCCTCGCAACCCGGACCTTTGATCCTGAATGGTGAAAAGACGCCCACGCATCCGCACCAGAATTCCCAGCACCCGACCACCGGCGGAGTGAGTGTgagtggaggcggcggcggcggtgagAGGAACCATAGCTTCAATGGCTCCGATTACGGCGGCGACAAGGAGCCCCTTTCCCCATACACCGATCGATCCTTCGAGGAGGAGACCGGCCAGTCTGGCGGCAAGAAGCCGGAGTGGAAGCGCTACAAGCAGTACACGCGGGCGGACATGATGTGCGCTATCCAGGCGGTGCGCGAGGGCATGAGTGCGCTCCAGGCGAGCCGCAAATATGGCCTGCCCAGTCGCACCCTCTACGACAAGGTGCGCAAGCTGAACATCACCACGGGCAGGGGCACCCATCGCACACCGAAGCGTAGTCCTCCCGGTGCCGAGGCCTCGCAGGGATTTCCCTATTCCGCGgccgcagcagctgcggcTGCCCACAACTATGGCCATGGACATGTGCATCCCTCGGAGCTGAAGCGTGACTCCAAGGGGGACCATGTGCCCGCTCACCATGGCATGCCGCCCACCATTCCCCCCTCGGCGGCCGCCCTGCTGGATCATGCCTTCCTGCAGCAGGCTCTGGAGAATCGAGGCGGCGACATGGCCGGCCGGGAGGCTCTCCATGCCATGGCCTTGGCCGCCGCTGCCCATGCCGCAGCCAATCGCATGTCCAGCAGTCCGGCGGACACGGATCAGCGTTCCAATGGCCATGGCATGCGTTCGCCGAGTCCTGGCCGTCACTATCAGGACCAGGAGGCCATGGACCTGGAGATGGAGAAGCATGAGCAGCGCATGATCAAGCGAGAGCGCGACCAGGACGAGCGTGAAGATGCCGACGATGAGGAGGATCATGAGCAGGAGCATGTGGAGGATCTGTCGCTGGCGAGGAAGGAGCGACCAGCATCGCCATACTCGCCGCAGCCGCCACAGGTGGAGGGAGCTGCCGGGGTGATCATGCATGCCAGCAGTGCCAATGGCAAGGAGCACGATCATGAGCGGGAGCGGGAAAGGGAACGGGAGCAGGAGGACTATCCACACTCGCCACCACCCTTTGCCCTGGGCATGGGCCTCAAGCGGGAGATCATCGAGGGCGAGGAGGCTCAGGCCCAGGCGCGGGCCGACTGA
Protein Sequence: MGGPTAPGSTVASSGGGGEVGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFQAHRVVLAANSPYFQHILRDVPQDHCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHHASSSASATPTSSSSGKPLNGGSHSHSSSVISTSTHISPSAAISSSCSPPPPPPPQFGGYQPAFSHHYPPQSLPASSQGPAGSEPPLTPTHVTAPPSSGPSSEAGAGGQWPMTPSAAAAMLNSVYESAADMNPLKRKKLSAISSMLLSGNRDTPILRNVLAQANPADSSQPGPLILNGEKTPTHPHQNSQHPTTGGVSVSGGGGGGERNHSFNGSDYGGDKEPLSPYTDRSFEEETGQSGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGAEASQGFPYSAAAAAAAAHNYGHGHVHPSELKRDSKGDHVPAHHGMPPTIPPSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRMSSSPADTDQRSNGHGMRSPSPGRHYQDQEAMDLEMEKHEQRMIKRERDQDEREDADDEEDHEQEHVEDLSLARKERPASPYSPQPPQVEGAAGVIMHASSANGKEHDHEREREREREQEDYPHSPPPFALGMGLKREIIEGEEAQAQARAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00525809;
90% Identity: iTF_00606236;
80% Identity: iTF_00541155;