Dvul023681.1
Basic Information
- Insect
- Drosophila vulcana
- Gene Symbol
- fru
- Assembly
- GCA_008042555.1
- Location
- VNJP01003551.1:76987-79110[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-12 1.6e-08 34.7 0.1 1 44 401 444 401 445 0.91 2 2 9 2.7e+04 -4.5 1.1 4 18 541 554 541 556 0.77
Sequence Information
- Coding Sequence
- ATGGGCGGCCCCACAGCGCCCGGTAGCACGGTcgccagcagcggcggcggaggcggcggcgaggTGGGTCAGACCTACTGCCTGCGCTGGAACAACCACCAGACGAACCTCGTACAGATCCTGCATGCCCTGCACGAGGTGGGCAGCTATGTGGACTGCACCCTGGTGGTCGACGATGAGCAATTCCAGGCCCATCGCGTTGTCCTGGCCGCCAACTCGCCGTATTTCCAGCACATTTTGCGCGATGTGCCGCAGGATCACTGCAGCATCATCCTGCCCGGGGTCAAGGGCTTCGAGATTGCGGCCCTGCTGCAGTACATGTACACGGGCGAGACGACGGTGACCAAGAGCCAGGAGCCGGAGATCCTGCGCACCGCCAAGGAGCTGCAGGTCAAGGGGCTCTACGACAACCTGATGAAGTTCAATCATCATGCCAGctccagtgccagtgccacgcccacctcgAGTTCGACTGCGGGTGGGAAGCCCCTCAATGGAGGCAGCCACAGCCACTCCTCGTCCGTGATCTCCACATCCACCCACATTTCGCCCAGCGCCGCCATCTCGAGCAGCTGctcgccaccaccgccaccgccgccccaGTTTGGCGGCTACCAGCCCGCCTTCAGTCACCACTATCCGCCGCAGTCGCTGCCGGCGAGCAGCCAAGGACCTGCCGGTTCGGAGTCCCCGCTGACCCCCACTCATGTGACTGCGCCACCCTCATCGGGACCATCATCGGACGCGGGCGCTGGAGGCCAATGGCCCATGACTCCgtccgctgccgctgccatgCTGAACTCCGTTTACGAATCCGCCGCCGATATGAATCCCCTCAAGCGCAAGAAGCTGTCTGCCATCTCGAGCATGCTGCTCAGCGGCAATCGCGACACACCGATCCTGCGCAATGTCCTGGCCCAGGCCAATCCCGCTGACTCCTCGCAACCGGGACCTCTGATCCTGAATGGCGAGAAGACCCCCACGCATCCGCACCAGAATCCCCAGCACTCGACGGCCAGCGGAGTGGGTGTGagtggaggcggtggcggcggcggcggcggagagAGGAACCATAGCTTCAATGGCTCTGATTACGGTGGCGACAAGGAGCCCCTGTCCCCGTACACCGATCGATCCTTTGAGGAGGAGACCGGCCAGTCTGGCGGCAAGAAGCCGGAGTGGAAGCGCTACAAGCAGTACACGCGGGCGGACATGATGTGCGCCATCCAGGCGGTGCGCGAGGGGATGAGTGCGCTCCAGGCGAGCCGCAAGTACGGCCTGCCCAGTCGCACCCTGTACGACAAGGTGCGCAAGCTGAACATCACCACGGGCAGGGGCACCCATCGCACCCCAAAGCGCAGTCCTCCCGGGGCGGAGGCCTCGCAGGGATTCCCCTATTCGGcggccgcagcagctgcagctgctcacAACTATGGCCATGGACACGTGCATCCCTCGGAGCTGAAGCGTGACCCTAAGGGCGATCATGTGCCCGCTCACCATGGCATGCCGCCCACCATTCCCCCTTCAGCGGCCGCCCTGCTGGACCATGCCTTCCTGCAGCAGGCTCTGGAGAACCGAGGCGGCGACATGGCCGGGCGCGAGGCTCTCCATGCCATGGCCTTGGCCGCCGCTGCCCATGCTGCTGCCAATCGCATGTCCAGCAGCCCGGCGGAGACGGATCAGCGTTCCAATGGTCATGGCATGCGATCGCCGAGTCCTGGCCGTCACTATCAGGACCAGGAGGCCATGGACCTGGAGATGGAGAAGCATGAGCAGCGCTTGATCAAGCGAGAGCGCGACCAAGACGAGCGGGAAGACGCTGACGATGAGGAGGATCACGAGCAGGAGCATGTGGAGGATCTGTCGCTGGCGAGGAAGGAGCGACCCCCATCGCCCTACTCGCCGCAGCCGCCGCACGtggagggaggaggaggagctgccggGGTGATCATGCATGCCAGCAGCGCCAATGGCAAGGAGCACGAGCATGAGCTGGAGAGGGaacgggagcgggagcaggacgACTATCCACACTCGCCGCCACCCTTTGCCCTGGGCATGGGCCTCAAGCGGGAACTCATCGAGGGCGAGGAGGCCCAGGCACAGGCGCGGGCCGACTGA
- Protein Sequence
- MGGPTAPGSTVASSGGGGGGEVGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFQAHRVVLAANSPYFQHILRDVPQDHCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHHASSSASATPTSSSTAGGKPLNGGSHSHSSSVISTSTHISPSAAISSSCSPPPPPPPQFGGYQPAFSHHYPPQSLPASSQGPAGSESPLTPTHVTAPPSSGPSSDAGAGGQWPMTPSAAAAMLNSVYESAADMNPLKRKKLSAISSMLLSGNRDTPILRNVLAQANPADSSQPGPLILNGEKTPTHPHQNPQHSTASGVGVSGGGGGGGGGERNHSFNGSDYGGDKEPLSPYTDRSFEEETGQSGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGAEASQGFPYSAAAAAAAAHNYGHGHVHPSELKRDPKGDHVPAHHGMPPTIPPSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRMSSSPAETDQRSNGHGMRSPSPGRHYQDQEAMDLEMEKHEQRLIKRERDQDEREDADDEEDHEQEHVEDLSLARKERPPSPYSPQPPHVEGGGGAAGVIMHASSANGKEHEHELEREREREQDDYPHSPPPFALGMGLKRELIEGEEAQAQARAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00525809;
- 90% Identity
- iTF_00606236;
- 80% Identity
- iTF_00617731;