Basic Information

Insect: Drosophila lacteicornis
Gene Symbol: fru
Assembly: GCA_008044355.1
Location: VNKF01009468.1:13035-15131[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 4.6e-12 1.1e-08 34.7 0.1 1 44 391 434 391 435 0.91

2 2 8 1.9e+04 -4.8 1.1 4 17 531 543 531 545 0.74

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	4.6e-12	1.1e-08	34.7	0.1	1	44	391	434	391	435	0.91
2	2	8	1.9e+04	-4.8	1.1	4	17	531	543	531	545	0.74

Sequence Information

Coding Sequence: ATGGGCGGCCCCACAGCGCCCGGCAGCACGGTCGCCAGTAGCGGCgtcggtggcggcggcgaggTGGGTCAGACGTACTGCCTGCGCTGGAACAACCACCAGACGAACCTGGTACAGATCCTGCACGCCCTCCACGAGGTGGGCAGCTATGTGGACTGCACCCTGGTCGTCGACGACGAGCAGTTCCAGGCCCATCGCGTTGTCCTGGCGGCCAACTCGCCGTATTTCCAGCACATCCTGCGCGATGTGCCGCAGGATCACTGCAGCATCATCCTGCCCGGCGTTAAGGGCTTCGAGATTGCGGCCCTGCTGCAGTACATGTACACGGGCGAGACGACGGTGACCAAGAGCCAGGAGCCGGAGATTCTGCGCACCGCCAAGGAGCTGCAGGTCAAGGGACTCTACGACAACCTCATGAAGTTCAATCaccactccagctccagctccagtgccacgcccacctcgAGCTCGACGGCTGGCAAGCCCCTGAACGGCGGCAGCCACAGCCACTCCTCGTCCGTGATCTCCACATCCACCCACATCTCGCCCAGTGCCGCCATCTCGAGCAGCTGctcgccaccaccgccgccgccgcagttTGGCGGCTATCAGCCCGCCTTCAGTCACCACTATCCGCCGCAGTCGCTGCCGGCGAGCAGCCAAGGTCCTTCGGGATCGGAGCCCCCCCTAACACCCACCCATGTGAGTGGGGCTCCGCCCTCTGGGGGACCGACGGAGACGGGCGGTGGCCAGTGGCCCATGACCCcgtccgctgccgctgccatgCTGAACTCCGTTTACGAATCCGCCGCCGACATGAATCCCCTCAAGCGCAAGAAGCTGACGGCCATCTCGAGCATACTGCTCAGCGGCAACCGCGACACACCGATCCTGCGCAATGTCCTGGCCCAGGCCAATCCCGCCGACTCCTCGCAACCCGGACCGCTGATCATCAATGGCGAGAAGACGCCCACGCATCCGCACCAGAATCCGCAGCACTCGACGGCCGGTGGGGTGGGAGTGAGTGGCGGCGAGCGGAATCACAGCTTCAATGGCTCCGACTATGGCGGCGACAAGGAGCCCCTCTCCCCTTACACCGATCGATCCTTCGAGGAGGAGAGCGGCCAGTCGGGAGGCAAGAAGCCGGAGTGGAAGCGCTACAAGCAGTACACGCGGGCGGACATGATGTGCGCCATCCAGGCGGTGCGCGAGGGCATGAGTGCGCTCCAGGCGAGTCGCAAGTACGGCCTGCCCAGCCGCACCCTCTACGACAAGGTGCGCAAGCTGAACATCACCACAGGAAGGGGTACACATCGCACGCCCAAGCGTAGTCCTCCGGGGGCAGAGGCCTCGCAGGGATTCCCCTATTCCGCCGCagcggccgctgctgctgcccacaACTATGGCCACGGGCATGTCCATCCCTCGGAGCTGAAGCGTGACCCGAAGGCGGATCATGTGCCCGCTCACCATGGTATGCCGCCCACCATTCCCCCCTCGGCGGCCGCTCTGCTGGACCATGCCTTCCTGCAGCAGGCTCTGGAGAACCGAGGCGGCGACATGGCCGGTCGGGAGGCCCTCCATGCCATGGCCCTGGCTGCCGCCGCTCATGCTGCAGCCAATCGCATGTCCAGCAGTCCGGCGGAGCCAGATCAGCGCTCCAATGGCCATGGCATGCGTTCGCCGAGTCCAGGGCGTCACTATCAGGACCAGGAGGCCATGGACCTGGAGATGGAGAAGCACGAGCAGCGGCTGATCAAGCGGGAGCGCGACCAGGACGAGCGAGAGGATGCtgacgacgaggaggatcaCGAGCAGGAGCATGTGGAGGATCTGTCGCTGGCGCGGAAGGAGCGACCCCCATCGCCCTACTCCCCGCAGCCCCAGGCTgagccaggagcagctggggTGATCATGCATTCGGGCAGTGCCAATGGCAAGGAGCATGACCACGAAAGGGAAcgagagcgggagcgggagcgggagcgggagcaggaggacTACCCGCACTCACCGCCGTCCTTTGCCATGGGCATGGGCCTGAAGCGGGAGTTGCTCGAGGGCGAggaggcccaggcccaggcgcGGGCCGACTGA
Protein Sequence: MGGPTAPGSTVASSGVGGGGEVGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFQAHRVVLAANSPYFQHILRDVPQDHCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHHSSSSSSATPTSSSTAGKPLNGGSHSHSSSVISTSTHISPSAAISSSCSPPPPPPQFGGYQPAFSHHYPPQSLPASSQGPSGSEPPLTPTHVSGAPPSGGPTETGGGQWPMTPSAAAAMLNSVYESAADMNPLKRKKLTAISSILLSGNRDTPILRNVLAQANPADSSQPGPLIINGEKTPTHPHQNPQHSTAGGVGVSGGERNHSFNGSDYGGDKEPLSPYTDRSFEEESGQSGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGAEASQGFPYSAAAAAAAAHNYGHGHVHPSELKRDPKADHVPAHHGMPPTIPPSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRMSSSPAEPDQRSNGHGMRSPSPGRHYQDQEAMDLEMEKHEQRLIKRERDQDEREDADDEEDHEQEHVEDLSLARKERPPSPYSPQPQAEPGAAGVIMHSGSANGKEHDHEREREREREREREQEDYPHSPPSFAMGMGLKRELLEGEEAQAQARAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00590167;
90% Identity: iTF_00606236;
80% Identity: iTF_00531739;