Basic Information

Insect: Drosophila mimetica
Gene Symbol: -
Assembly: GCA_037075245.1
Location: JBAMCH010000023.1:8608668-8613160[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.0023 0.18 12.5 0.8 1 23 209 231 209 231 0.95

2 25 7.6 5.9e+02 1.4 3.2 1 20 237 256 237 259 0.80

3 25 0.0023 0.18 12.5 1.3 3 23 292 312 290 312 0.97

4 25 0.0012 0.089 13.4 2.8 1 23 385 408 385 408 0.94

5 25 0.25 19 6.1 1.2 1 23 448 470 448 470 0.97

6 25 0.028 2.2 9.1 0.1 3 23 483 503 482 503 0.98

7 25 0.062 4.8 8.0 0.1 1 23 578 601 578 601 0.98

8 25 0.0015 0.11 13.1 1.2 2 21 611 630 610 631 0.93

9 25 0.11 8.2 7.3 5.0 1 23 640 662 640 663 0.95

10 25 0.0054 0.41 11.3 3.7 2 23 676 697 675 697 0.97

11 25 0.00026 0.02 15.5 7.1 1 23 705 727 705 727 0.97

12 25 0.0013 0.098 13.3 0.5 1 23 865 888 865 888 0.95

13 25 0.075 5.8 7.7 2.7 2 23 896 919 895 919 0.91

14 25 0.0025 0.19 12.4 1.6 1 23 925 948 925 948 0.96

15 25 6e-05 0.0046 17.5 1.5 2 23 967 988 966 988 0.97

16 25 0.00032 0.024 15.2 0.9 1 23 995 1017 995 1017 0.98

17 25 0.078 6 7.7 0.0 2 21 1044 1063 1043 1064 0.93

18 25 0.01 0.77 10.5 3.1 1 23 1109 1132 1109 1132 0.96

19 25 0.0039 0.3 11.8 1.0 1 23 1169 1192 1169 1192 0.96

20 25 0.00075 0.058 14.0 3.0 1 23 1218 1241 1218 1241 0.98

21 25 5.5e-06 0.00042 20.8 0.2 2 23 1267 1288 1266 1288 0.95

22 25 5.8e-05 0.0045 17.5 2.4 1 23 1294 1316 1294 1316 0.99

23 25 2.2e-06 0.00017 22.0 2.0 1 23 1322 1344 1322 1344 0.97

24 25 1.9e-07 1.5e-05 25.3 2.4 1 23 1350 1372 1350 1372 0.99

25 25 0.00097 0.075 13.7 0.2 1 22 1378 1399 1378 1402 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.0023	0.18	12.5	0.8	1	23	209	231	209	231	0.95
2	25	7.6	5.9e+02	1.4	3.2	1	20	237	256	237	259	0.80
3	25	0.0023	0.18	12.5	1.3	3	23	292	312	290	312	0.97
4	25	0.0012	0.089	13.4	2.8	1	23	385	408	385	408	0.94
5	25	0.25	19	6.1	1.2	1	23	448	470	448	470	0.97
6	25	0.028	2.2	9.1	0.1	3	23	483	503	482	503	0.98
7	25	0.062	4.8	8.0	0.1	1	23	578	601	578	601	0.98
8	25	0.0015	0.11	13.1	1.2	2	21	611	630	610	631	0.93
9	25	0.11	8.2	7.3	5.0	1	23	640	662	640	663	0.95
10	25	0.0054	0.41	11.3	3.7	2	23	676	697	675	697	0.97
11	25	0.00026	0.02	15.5	7.1	1	23	705	727	705	727	0.97
12	25	0.0013	0.098	13.3	0.5	1	23	865	888	865	888	0.95
13	25	0.075	5.8	7.7	2.7	2	23	896	919	895	919	0.91
14	25	0.0025	0.19	12.4	1.6	1	23	925	948	925	948	0.96
15	25	6e-05	0.0046	17.5	1.5	2	23	967	988	966	988	0.97
16	25	0.00032	0.024	15.2	0.9	1	23	995	1017	995	1017	0.98
17	25	0.078	6	7.7	0.0	2	21	1044	1063	1043	1064	0.93
18	25	0.01	0.77	10.5	3.1	1	23	1109	1132	1109	1132	0.96
19	25	0.0039	0.3	11.8	1.0	1	23	1169	1192	1169	1192	0.96
20	25	0.00075	0.058	14.0	3.0	1	23	1218	1241	1218	1241	0.98
21	25	5.5e-06	0.00042	20.8	0.2	2	23	1267	1288	1266	1288	0.95
22	25	5.8e-05	0.0045	17.5	2.4	1	23	1294	1316	1294	1316	0.99
23	25	2.2e-06	0.00017	22.0	2.0	1	23	1322	1344	1322	1344	0.97
24	25	1.9e-07	1.5e-05	25.3	2.4	1	23	1350	1372	1350	1372	0.99
25	25	0.00097	0.075	13.7	0.2	1	22	1378	1399	1378	1402	0.91

Sequence Information

Coding Sequence: ATGCTTCCCTCCGATATTTGCCGCACTTGCGGCCTGCAAAACGGCCATTTGGTGCCTTTGTCCACCTGTCTGAACAGAGACGCCACCAAAAGCTACTACAATGTCCTCCAGGAACTGACGCAAATCGATACCCAACTGGCGAGCTCGGATGATAATTTGCCGCAACATCTGTGCAGCGATTGCTGGACAAGATTGGGGAATGCCCACGCCTTCGTGGAGCAGGCTAGAAGAGTCAATGGAGAGCTGCTGGCACGCCTCCGGGAATGTCTGGATGAAATGCCCATCGACATTCCCCAGGAGCAGAACATAAAGACCGAGGTGGACCTCGATGATGAGGGCAACAAGTGCGAGGGTGTGGATGTGGAATCCACTGGACTTGCTGCTATGGAGCTCAAATGGCAGCCGGAAAGTGGCAGCGATGAGGAGTTTCTTGATGCAGCGGAGAGCGATGAAGATGAAGTGGATAAGAAGACCTACCATCTGCGGCGAAGTTCCCGAAAAGTCAAGCATGCAGTGGAGAGCGAAGATGAGGACGTTAAACCCCCTGAACCATCGCCCGTCAAGCGGCGTCGAGGACGTCCACCTGGTCCAGCTAAGAGCACGTCCATGACTACCGATGGCCGCCACGCATGCGAGGTCTGCGGGAAGACCTTTTCCTGGTACCGCGACATGCAGCGCCACGCCAAGATTCACTTCGAGCAGGCTTCGTTCGTGTGCGACAGCTGTGGCAAGGGATTCCTGCGCAAGGACAAGTACATGTTCCACCTTCGCTGTCACAAGAAACGCGAGGCCAAGTGGAAGGCTCTCCAAGTGGGAAAGGAATGGCGCTTCGTAGAGCGCCTCTACAGTTCCGGCCGCTTGAAGAAAATCGACTGCAAGCTGTGCGGTTTGAGTTGCCAGCGAATGGAGGAGCTTCGAATGCACATCAAGACTCATGTGGACGTAGGGAGCTTATCGAATTTGAGAAAGGATAGCGATGTTGTCAGAGAGCACTTTCCTGGCTTTCCATGCGACTTGGACATTGTAAAGCAACAGATAGGCACTGAAATAGCCGAGGGGTATTCTGAGAAGTTTGCCTGTGTTGTGAATTTCCACGGCTATGAGTTGGGGCTCAGTGATTCCGATGAAGAGTGTGACAGCAAAGAGTCCAAGTATAATTGCTTTGTGTGCAATCTGTCTTTTACCCGCAAACACCGCTTGATAAGGCACACACTGGAGGAACACTCCCAGTCCCCGGCAACGGTTCCCTGGCTGCGATGCAGTTCCTGCAAGGTTGGCTTCCTGTGCCGAACACTCTACAACCAGCATTTGAGCACCCATTGCCACAGCAAAATAAAGCGATATCGCTGCCGGAAATGTCCAGGCAAGTTCATGTGGCCGGAGAACCTGCAGAACCACGCGTGCTCTCATCGCCGGGAAGACAAGACCGTACCCAAACATATTCTATGTTCCTTGTGCGATACTGCGCTACCCAGTTTGGCTCAACTTCGCATGCACCTAATAACCCACCAGCATGATTTGAATGGCATTAGTTCGGAATACAATTCCTCCTTCTTTCGCTCGTTTTACCCTGATGGTTTGAACTGCTCTACCGCGGATCTTGCTGCCCGTATAGCTGAGGATTTCGAGGTCCAGGACTTTGATCGCTACTACAACGTCTGCACTGAAAGTGGGCAAGAGCTGGATCTTTTTGATTCCGAAACAGAGCAGAGCGATGAGGAGACTAAGACATACACTTGCCTTCTATGCGGAGAGGTGGCGAGCACACTGGCGATTCTGATGCAGCACCAAAAGACCTTGCATGCCGATGGGACGACTGATCTTCCCTGTCCTTGCGAGAATTGTGGAGCTCGGTTCGTCAGCAAGGCTTTGCTGCAACAGCATCGCAGACATCGTTGTGCAAAGAAATACTCTCGTTTCCACTGCCAGAGCTGCAATGTCCGATTCGTGTGGCAGTCCAATTATGAGCGCCATCTGAAGAGTCACCATAACAAAAATGAAGATGAAGAACTGGCCTCCAAGTTGCAGTGCCACGAATGCGAAAAGGTATTTATCTGGCATAAAGATCTCAACCGTCACAAGCGACTTCATCAACCTCAGTCGGCCGCCCAGTTCGACTGTCCCCATTGTCACCGCAGGTTCCACCGCAAGGATGGCCTAAAATCTCACCTTAAAGTGCATGCGGGAGAACCAGTTCAAGTAAATGAGCTGCGTACCGTACCCACTGTTCTCCAAGGAATGACTCTGAACCGGCTAAGTCGTCCTCATGGCTGCAAGGTGATTCAGTGCATGATCTGCCTCTCACGACACTCGAAGATCAGTGATCTAAGGACTCACATGAGTTCCCATCAATATGGATTAAGCTTCGCCGGAGATAGAGATATCGCTAGTGCCTCTAGAGCTTTTTACCCTGAACTGGAAACTGCCTTAGTAAGAAACGAACTTGCCGAAAGGATTATGGCTGATGTGGAGAAGAAATTCGATTTGGATCGATTTATTTCTATCACGAATGAGGCTGGCCTTGAACTGAATCTCGACAGCAGCGAAACTGATACAGAGTCCGAGCAAGAGGAAGATCAAACAGCACAGAGCTATGCCTGCAATATTTGTACAGCGGTTGTGAGGAGAAAACATCAGTTGTATGCCcaccagcaggaggagcacaAGTGGGAGGACGCATCACTTGAATGCTCCCAGTGCCAGGCTAGATTTGTTAACGAATCTCTGCTGGATCATCACTCCAGAACCCTTTGTCACAATGCTCAGAAGGTCTTTCAGTGTCGCAAGTGTCCCCTTCGCTTCCGCTGGCGGGAGAATCTTAAGCTCCACATGAACCTGTTCCATCAGCAAGCCGAAATTCCCATCCCCGATGAGTCCCCGCAAGCAGAGGGCGATCTGCAGTGCGGAAAGTGCGAGCGCAGCTTTAAGATGCAGAAGGATCTCACCCGTCATACGCTTATGCACGGTCAGGAATCGAACATCTTTCGGTGCCGTTGGTGTGCGCGTCGCTTCTATCGCAGGGCCAATCTTCTGCAGCATATCGCCCGGCACGGCATAAGTGTAAGCCAATTGCCATATGCAGAGGCAATCCTGGACTCATACGCGAATCCTGGAGGCCAAAAGAAGGTAGAGTGCCGAGTGTGTAGTTTAAGCTTTCCCACCATCGCATCCCTGCGTTTGCATCTGGAAACCATGCCTGCTGGAAGTCACCACGACTTCTCCTCACTTCAAAACTACTCGATTACGAACCAGTTGGGCTACGAGATGGAGCTGGATGATTCGGAGACTGATGATGATGCAAAACCACCCGGCGCTTCTGACTTTTACACCTGCGGCATGTGCCAACTAAGGTGCTCGCGGAAATTCGAGCTTTATCAACACCAGCAGGCCATGCACAGGATGGAGAAGATCCCCGACGGCTGTGATAGGTGCATCTTCAAAAGCGTCTGTCCGGAAATCATTGCTCACCATAAAAAGACTCAGTGTGAAAACCGGGAAAAACAGTTCACATGCACTCGCTGCGGCTACAAGTTCATGTGGGAATCTAATCTGTTGCAGCACATGCAGTTGCAGCATGAAAAGGTGGACGATCAAGAGCTTGATGAGACCAAGGAGGCGTCTGGTGATGAACCAAAGGCCGAGTGTCAGGTCTTCAAGTGCGGCCTTTGTACGCGAAAATACAACCGCAAGGATCGGCTCACGGCGCACTTGAAGAAGTTCCATGGCCCCGATGGCAAGGGCCCCAATCAAGTTAAGCCCTCGAATAGACCCTCATCTCCCAAGGAACCAAAGCGTTTCCTGTGCGCCTTTTGTGGCAAGGCGGTCAGCTCCTCGTCCAATCTGATCATCCACATGCGCCGTCATACGGGGGAGAAGCCGTTCAAGTGCGACTATTGCCCAATGGCCTTCCCCCGATCCTCTGACCTCCAGTGCCACCGACGGACGCACACCGGCGAGCGTCCACATGTGTGCACCGTCTGCCAAAAGGGTTTCGCCCGCTCGTACAAACTGCAGCAGCACATGCGAATCCACAGCGGGGAGCGGCCCTACAAGTGCACCTATTGCGAGAAGAGCTTCACGCAGTCCAACGACCTCACTCTCCACATCCGCCGGCACACAGGCGAGCGGCCCTACCAGTGCGGAGTCTGCGGGGAGCGATTTATCCAGGGCACCGCTTTGAAGAACCATCGCATGCAGCAGAGTCACTACGAGGAGGGACAGGAGTCGGCGGAGCCTGCAAGGCGCACGGTCTTGGAGCAGTTTACTATATAA
Protein Sequence: MLPSDICRTCGLQNGHLVPLSTCLNRDATKSYYNVLQELTQIDTQLASSDDNLPQHLCSDCWTRLGNAHAFVEQARRVNGELLARLRECLDEMPIDIPQEQNIKTEVDLDDEGNKCEGVDVESTGLAAMELKWQPESGSDEEFLDAAESDEDEVDKKTYHLRRSSRKVKHAVESEDEDVKPPEPSPVKRRRGRPPGPAKSTSMTTDGRHACEVCGKTFSWYRDMQRHAKIHFEQASFVCDSCGKGFLRKDKYMFHLRCHKKREAKWKALQVGKEWRFVERLYSSGRLKKIDCKLCGLSCQRMEELRMHIKTHVDVGSLSNLRKDSDVVREHFPGFPCDLDIVKQQIGTEIAEGYSEKFACVVNFHGYELGLSDSDEECDSKESKYNCFVCNLSFTRKHRLIRHTLEEHSQSPATVPWLRCSSCKVGFLCRTLYNQHLSTHCHSKIKRYRCRKCPGKFMWPENLQNHACSHRREDKTVPKHILCSLCDTALPSLAQLRMHLITHQHDLNGISSEYNSSFFRSFYPDGLNCSTADLAARIAEDFEVQDFDRYYNVCTESGQELDLFDSETEQSDEETKTYTCLLCGEVASTLAILMQHQKTLHADGTTDLPCPCENCGARFVSKALLQQHRRHRCAKKYSRFHCQSCNVRFVWQSNYERHLKSHHNKNEDEELASKLQCHECEKVFIWHKDLNRHKRLHQPQSAAQFDCPHCHRRFHRKDGLKSHLKVHAGEPVQVNELRTVPTVLQGMTLNRLSRPHGCKVIQCMICLSRHSKISDLRTHMSSHQYGLSFAGDRDIASASRAFYPELETALVRNELAERIMADVEKKFDLDRFISITNEAGLELNLDSSETDTESEQEEDQTAQSYACNICTAVVRRKHQLYAHQQEEHKWEDASLECSQCQARFVNESLLDHHSRTLCHNAQKVFQCRKCPLRFRWRENLKLHMNLFHQQAEIPIPDESPQAEGDLQCGKCERSFKMQKDLTRHTLMHGQESNIFRCRWCARRFYRRANLLQHIARHGISVSQLPYAEAILDSYANPGGQKKVECRVCSLSFPTIASLRLHLETMPAGSHHDFSSLQNYSITNQLGYEMELDDSETDDDAKPPGASDFYTCGMCQLRCSRKFELYQHQQAMHRMEKIPDGCDRCIFKSVCPEIIAHHKKTQCENREKQFTCTRCGYKFMWESNLLQHMQLQHEKVDDQELDETKEASGDEPKAECQVFKCGLCTRKYNRKDRLTAHLKKFHGPDGKGPNQVKPSNRPSSPKEPKRFLCAFCGKAVSSSSNLIIHMRRHTGEKPFKCDYCPMAFPRSSDLQCHRRTHTGERPHVCTVCQKGFARSYKLQQHMRIHSGERPYKCTYCEKSFTQSNDLTLHIRRHTGERPYQCGVCGERFIQGTALKNHRMQQSHYEEGQESAEPARRTVLEQFTI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00507742; iTF_00536910; iTF_00578682; iTF_00581674; iTF_00605711; iTF_00602741; iTF_00486701; iTF_00619276; iTF_00592521; iTF_00539791; iTF_00596784; iTF_00504818; iTF_00607922; iTF_00591827; iTF_00588278; iTF_00512137; iTF_00494520; iTF_00529691; iTF_00505534;
90% Identity: -
80% Identity: -