Basic Information

Insect: Drosophila takahashii
Gene Symbol: -
Assembly: GCA_018152695.1
Location: JAECXN010000004.1:7585494-7590859[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.00085 0.052 13.8 1.0 1 23 212 234 212 234 0.96

2 25 2.5 1.5e+02 2.9 3.3 1 20 240 259 240 262 0.80

3 25 0.0032 0.2 12.0 1.3 3 23 295 315 293 315 0.97

4 25 0.19 12 6.4 0.8 6 23 393 411 388 411 0.87

5 25 0.42 26 5.3 1.0 1 23 452 474 452 474 0.97

6 25 0.18 11 6.5 0.0 3 23 488 508 487 508 0.98

7 25 0.031 1.9 8.9 0.3 1 23 584 607 584 607 0.97

8 25 0.0014 0.087 13.1 1.2 2 21 617 636 616 637 0.93

9 25 0.02 1.2 9.5 4.2 1 23 646 668 646 669 0.95

10 25 0.0002 0.012 15.8 1.8 2 23 682 703 681 703 0.97

11 25 2.6e-05 0.0016 18.6 5.9 1 23 711 733 711 733 0.97

12 25 0.026 1.6 9.1 0.2 1 23 872 895 872 895 0.94

13 25 1.3 82 3.8 6.7 2 23 903 926 902 926 0.91

14 25 0.0025 0.16 12.3 1.1 1 23 932 955 932 955 0.95

15 25 5.9e-05 0.0036 17.5 2.0 2 23 974 995 973 995 0.97

16 25 0.00031 0.019 15.2 0.9 1 23 1002 1024 1002 1024 0.98

17 25 0.13 7.8 7.0 0.0 2 21 1051 1070 1050 1071 0.92

18 25 0.0031 0.19 12.1 2.9 1 23 1116 1139 1116 1139 0.96

19 25 0.01 0.63 10.4 1.1 1 23 1176 1199 1176 1199 0.96

20 25 0.00073 0.045 14.0 3.0 1 23 1225 1248 1225 1248 0.98

21 25 5.3e-06 0.00033 20.7 0.2 2 23 1274 1295 1273 1295 0.95

22 25 5.6e-05 0.0035 17.5 2.4 1 23 1301 1323 1301 1323 0.99

23 25 2.1e-06 0.00013 22.0 2.0 1 23 1329 1351 1329 1351 0.97

24 25 1.9e-07 1.1e-05 25.3 2.4 1 23 1357 1379 1357 1379 0.99

25 25 0.00089 0.055 13.7 0.1 1 22 1385 1406 1385 1409 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.00085	0.052	13.8	1.0	1	23	212	234	212	234	0.96
2	25	2.5	1.5e+02	2.9	3.3	1	20	240	259	240	262	0.80
3	25	0.0032	0.2	12.0	1.3	3	23	295	315	293	315	0.97
4	25	0.19	12	6.4	0.8	6	23	393	411	388	411	0.87
5	25	0.42	26	5.3	1.0	1	23	452	474	452	474	0.97
6	25	0.18	11	6.5	0.0	3	23	488	508	487	508	0.98
7	25	0.031	1.9	8.9	0.3	1	23	584	607	584	607	0.97
8	25	0.0014	0.087	13.1	1.2	2	21	617	636	616	637	0.93
9	25	0.02	1.2	9.5	4.2	1	23	646	668	646	669	0.95
10	25	0.0002	0.012	15.8	1.8	2	23	682	703	681	703	0.97
11	25	2.6e-05	0.0016	18.6	5.9	1	23	711	733	711	733	0.97
12	25	0.026	1.6	9.1	0.2	1	23	872	895	872	895	0.94
13	25	1.3	82	3.8	6.7	2	23	903	926	902	926	0.91
14	25	0.0025	0.16	12.3	1.1	1	23	932	955	932	955	0.95
15	25	5.9e-05	0.0036	17.5	2.0	2	23	974	995	973	995	0.97
16	25	0.00031	0.019	15.2	0.9	1	23	1002	1024	1002	1024	0.98
17	25	0.13	7.8	7.0	0.0	2	21	1051	1070	1050	1071	0.92
18	25	0.0031	0.19	12.1	2.9	1	23	1116	1139	1116	1139	0.96
19	25	0.01	0.63	10.4	1.1	1	23	1176	1199	1176	1199	0.96
20	25	0.00073	0.045	14.0	3.0	1	23	1225	1248	1225	1248	0.98
21	25	5.3e-06	0.00033	20.7	0.2	2	23	1274	1295	1273	1295	0.95
22	25	5.6e-05	0.0035	17.5	2.4	1	23	1301	1323	1301	1323	0.99
23	25	2.1e-06	0.00013	22.0	2.0	1	23	1329	1351	1329	1351	0.97
24	25	1.9e-07	1.1e-05	25.3	2.4	1	23	1357	1379	1357	1379	0.99
25	25	0.00089	0.055	13.7	0.1	1	22	1385	1406	1385	1409	0.91

Sequence Information

Coding Sequence: ATGCTTCCCCCGGACATTTGTCGCACCTGTGGGTTGCAAAATGGTCAGTTGGTAGCTTTGTCCACCTCCCTAGACAGAGACGCCTCCAAAAGTTACTACGAAGTGCTCCAGGAACTGACGCAAATCGATGCACCGCTGGAGAGCTCCGATGATAATCTGCCGCAGCATCTGTGCGCCGATTGCTGGACGAGATTGCAGAATGCCCATGCCTTCGTGGAGCAGGCCAAAAGGGTCAGTGGAGAACTCCTAGCTCGGCTGAGGGAATGTCTGGATGAAATGCCCATCGACATTCCGCAGGAGGAGCAGAACATAAAGACCGAGGTGGACCTCGATGATGAGGGCACCAAGTGCGAGGATGTGGATGTGGAATCCACTGGACTAGCAACTCTGGAGCTCAAATGGCAGCCGGAGAGTGGCAGCGATGAGGAATTCCTTGATGCAGCGGAGAGCGTTGAAGATGAAGTGGACAAGAAGACCTATCATCTGCGTCGAAGTTCCCGGAAGGTCAAGCAGCCAGTGGAAAGCGAAGATGAGGACTTTAAACCACCTGAACCTGAACCATCGCCCGTCAAGCGGCGGCGAGGACGTCCACCTGGTCCAGCTAGAAGCACATCGATGACCACCGATGGCCGCCACGCGTGCGAGGTGTGCGGAAAGACCTTCTCCTGGTACCGCGACATGCAGCGCCACGCCAGGATGCACTTCGAGCAGGCCTCGTTCGTGTGCGACACCTGCGGCAAGGGATTCCTGCGCAAGGACAAGTACATGTTCCACCTGCGCTGTCACAAGAAGCGCGAGGCCAAGTGGAAGGCTCTCCAGGTGGGCAAGGAGTGGCGCTTCGCCGAGCGTCTCTACAGCTCCGGCAGGTTGAAGAAAATCGACTGCAAGCTGTGCGGTTTGAGTTGCCAGCGAATGGAGGAACTTCGCAGTCACATTAAGAGTCATATAAACGTCGAGAGCTTGGGCAATTTGAGAAAGGATAGCGATGTGGTCAGGGAGCACTTCCCTGGCTTTCCCTGCGACCTGGACACTATCAAGCAACAGATCTGCGACGAAATAGCCGAAGGGCATTCTGAGAAGTTTGCCTGCATTGTGAATTTCCACGGATATGAGTTGGAACTCAGTGACTCTGATGAAGAGTGTGACAGCAAAGAGTCCAAATATAATTGCATTGCGTGCAATCTGTTTTTCACTCGGAAATATCGCTTGATTAAGCACACACTGGAGGAGCACTCGCAATCCAACGCTTCAAACCTTCCCTGGCAGCGCTGCAGTTCCTGTAAAGTGGGTTTCCTGTGCCCGACGCTTTTCAGCCAACACTTGAGCCACCATTGCCACAGCAAAACAAAGCGATACCGCTGCCGCAAGTGTCCGGGGAAGTTTATGTGGCCGGACAACCTGCTAAACCACGCGTGCTCACATCGCCGCGACGAGGACAAGACGATACCCAAGCAGATATTGTGCTCCCTGTGCGATGCTGCGCTGCCGAGTCTGCCTCAACTTCGCATTCACTTGACCACTCACCAGCATGACTTGAATGGCATTAGTCCGGAGTACAATTCCTCCTTCTTTCGCTCCTTTTATCCCGATGGATTGGACTGCACGGCCTCGGATCTTGCGGCTCGCATAGCTGAGGACTTTGAGATTCAGGAGTTTGATCGCTACTACAGCGTCTGTACGGAAAGTGGACAAGAGCTGGATCTTTTTGATTCCGAAACCGAGCAGAGCGATGAGGAGACCAACAAGACACACACTTGTCTGCTATGCGGAGAGGTGGCGACTACACTGACTGTTCTTATGGAGCACCAAAAGACGCTGCATGCGGACGGTGCCACCGATCTTCCCTGTCCCTGCGAAAATTGTGGAGCCCGATTTGTCAGCAAGGCATTGCTGCAACAGCACCGCAGGCATCGGTGCGCCAAGAAACACTCTCGTTTCCACTGCCAGAGTTGCGGTGTGCGATTCGTGTGGCAGTCCAACTATGAGCGCCACCTGAAGTCGCACCACAACAGAAATGAAGACCAAGAACTGGCCACCAAGTTGCAGTGCGACGAATGCGATAAGGTGTTCATCTGGCACAAGGATCTAAACCGTCACAAGCGAACCCATCAACCGCAGTCGGCAGCCCAGTTCGACTGTCCCCATTGCCAGCGCAGGTTTCACCGCAAGGATAACCTCAAGTCCCACCTAAAAGTTCATGCGGGAGAACCGGCTCAAGTAAGGGAGCGGTGTACAGTGCCTTACGCTGCCCAAGGACTACTGACCTTGTCCCGGCTTAGTCGTCCTCATGGCTGCAAGTTGATTCAGTGCATGATCTGCCTCTCGCGCCACTCGAAGATCAGTGATCTGAGGACTCACATGGGCGCCCATCAATACGGATTAAGTTTCACCGAAGGGAGGGATATTCCCAGTGCCTCGAAGGCTTTTTACCCCGAACTAGAAACTGCCTTGGAAAGAAACGAACTTGCCGAGAGGATTATGGCTGATGTGGAAAGGGGATTCGAGTTGGATCGATTTGTTTCCATCACAAGTGAGGCTGGCCTAGAACTGAGTCTCGACAGCAGTGAAACTGATACTGAGTCCGAGCAAGAGGAGGATAAATCAGCTCGCAGCTATGCCTGCAATCTGTGTGCAGCGGTTGTGAGGAGAAAGCATCAGTTGTATGCCCACCAGCTGGCCGAGCACAAATGGGAGGAAGCGTCCCTTGTGTGCTGCCATTGCCAGGCCAGGTTCGTCAACGAATCTCTGCTCGATCATCACTCCCGGACGCTCTGTCATAATGCGCAGAAGTTGTTTCAGTGTCGCAAGTGTCCGCTGCGCTTCCGCTGGCGGGAGAATCTCAAGATCCACATGGAGCTGTTCCATCAGCAAGCCGAAATTGCGGCCCCCGATGAATCCCCTCAAGCGGATGGGGATCTGCAGTGCGGAAAGTGCCAGCGCAGCTTCAAGATGCAGAAGGATCTCACGCGTCATACACTCATGCACGGCCAGGAGTCGAACATCTTCCGGTGCCGTTGGTGTGCACGTCGCTTCTATCGCAGGGCCAATCTGCTGCAGCATATCGCACGGCATGGCATAAGTGTAAGCCAATTGCCCTATGCTGAGGCCATCCTGGAGTCGTACGGGAATCCCGGAGGTCACAAGAAGGTGGAGTGCCGGGTGTGCAGCCTGAGCTTTCCCACAATCGCGGCGTTGCGCTTGCATTTGGAAACAATGCCCACAGGAAGTCACCACGACCTCCACTCACTTCAAAACTACTCGATTACCAGCCAGTTGGGCTACGAGATGGATCTGGATGATTCGGAGACTGATGATGGTGACGCTAGCAGGCATACAAAACCACCTTACACCTGTGGCATGTGCCAACTGAGGTGTTCGCGGAAGTACGAGCTATATCAGCACCAGCAGGCCATGCACCGGCTGGAGAAGATCCCCGACGGCTGTGACAGGTGCATCTTCAAGAGCGTCTGTCCGGAAATCATTGCCCATCATAAGAGGACGCAGTGCGAGAACCGGGAAAAGCAATTCACCTGCACTCGCTGCGGCTTTAAGTTCATGTGGGAATCCAATCTGTTGCAGCACATGCAGTTGCAGCATGAAAAGGTGGAGGATCAAGATCTCGATGAATCCAAGGAGGCGTCTGGCGATGAACCAAAAGCCGAGTGCCAGGTCTTCAAGTGCGGCCTTTGTACGAGGAAATACAACCGCAAGGATCGGCTCACGGCGCACTTGAAGAAGTTCCATGGTCCCGATGGCCAGGGCCCCGGTCAAGCGAAGGTCTCGAATAGATCCACATCGCCCAAGGAACCGAAGCGCTTCCTGTGTGCCTTTTGCGGCAAGGCGGTCAGTTCGTCGTCCAATCTGATCATCCACATGCGCCGCCACACCGGGGAGAAGCCCTTCAAGTGCGATTATTGCCCCATGGCCTTCCCCCGATCCTCTGACCTCCAGTGCCACCGTCGGACGCACACCGGCGAACGTCCGCATGTGTGCACCGTCTGCCAGAAGGGATTCGCCCGCTCGTACAAGCTGCAGCAGCACATGCGCATCCACAGCGGGGAGCGTCCCTACAAGTGCACCTATTGCGAGAAGAGCTTCACGCAGTCCAACGACCTGACTCTCCACATCCGCCGGCACACAGGCGAGCGGCCCTACCAGTGCGGCGTCTGCGGGGAGCGTTTTATCCAGGGCACCGCCCTCAAGAACCATCGGATGCAGCAGGGCCACTACGAGGATGGCCAGGAGTTGGGCGAGCCCACGAGGCGCACGGTTCTGGAGCAGTTTAGTGTGTAA
Protein Sequence: MLPPDICRTCGLQNGQLVALSTSLDRDASKSYYEVLQELTQIDAPLESSDDNLPQHLCADCWTRLQNAHAFVEQAKRVSGELLARLRECLDEMPIDIPQEEQNIKTEVDLDDEGTKCEDVDVESTGLATLELKWQPESGSDEEFLDAAESVEDEVDKKTYHLRRSSRKVKQPVESEDEDFKPPEPEPSPVKRRRGRPPGPARSTSMTTDGRHACEVCGKTFSWYRDMQRHARMHFEQASFVCDTCGKGFLRKDKYMFHLRCHKKREAKWKALQVGKEWRFAERLYSSGRLKKIDCKLCGLSCQRMEELRSHIKSHINVESLGNLRKDSDVVREHFPGFPCDLDTIKQQICDEIAEGHSEKFACIVNFHGYELELSDSDEECDSKESKYNCIACNLFFTRKYRLIKHTLEEHSQSNASNLPWQRCSSCKVGFLCPTLFSQHLSHHCHSKTKRYRCRKCPGKFMWPDNLLNHACSHRRDEDKTIPKQILCSLCDAALPSLPQLRIHLTTHQHDLNGISPEYNSSFFRSFYPDGLDCTASDLAARIAEDFEIQEFDRYYSVCTESGQELDLFDSETEQSDEETNKTHTCLLCGEVATTLTVLMEHQKTLHADGATDLPCPCENCGARFVSKALLQQHRRHRCAKKHSRFHCQSCGVRFVWQSNYERHLKSHHNRNEDQELATKLQCDECDKVFIWHKDLNRHKRTHQPQSAAQFDCPHCQRRFHRKDNLKSHLKVHAGEPAQVRERCTVPYAAQGLLTLSRLSRPHGCKLIQCMICLSRHSKISDLRTHMGAHQYGLSFTEGRDIPSASKAFYPELETALERNELAERIMADVERGFELDRFVSITSEAGLELSLDSSETDTESEQEEDKSARSYACNLCAAVVRRKHQLYAHQLAEHKWEEASLVCCHCQARFVNESLLDHHSRTLCHNAQKLFQCRKCPLRFRWRENLKIHMELFHQQAEIAAPDESPQADGDLQCGKCQRSFKMQKDLTRHTLMHGQESNIFRCRWCARRFYRRANLLQHIARHGISVSQLPYAEAILESYGNPGGHKKVECRVCSLSFPTIAALRLHLETMPTGSHHDLHSLQNYSITSQLGYEMDLDDSETDDGDASRHTKPPYTCGMCQLRCSRKYELYQHQQAMHRLEKIPDGCDRCIFKSVCPEIIAHHKRTQCENREKQFTCTRCGFKFMWESNLLQHMQLQHEKVEDQDLDESKEASGDEPKAECQVFKCGLCTRKYNRKDRLTAHLKKFHGPDGQGPGQAKVSNRSTSPKEPKRFLCAFCGKAVSSSSNLIIHMRRHTGEKPFKCDYCPMAFPRSSDLQCHRRTHTGERPHVCTVCQKGFARSYKLQQHMRIHSGERPYKCTYCEKSFTQSNDLTLHIRRHTGERPYQCGVCGERFIQGTALKNHRMQQGHYEDGQELGEPTRRTVLEQFSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00548203;
90% Identity: iTF_00581674; iTF_00578682; iTF_00536910;
80% Identity: -