Dtei000690.1
Basic Information
- Insect
- Drosophila teissieri
- Gene Symbol
- -
- Assembly
- GCA_016746235.1
- Location
- CM028597.1:22790331-22794836[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.00062 0.054 13.8 0.8 1 23 206 228 206 228 0.96 2 19 2.8 2.4e+02 2.4 2.8 1 19 234 252 234 256 0.80 3 19 0.013 1.1 9.7 1.3 2 23 288 309 287 309 0.97 4 19 0.0045 0.39 11.1 4.4 1 23 382 405 382 405 0.94 5 19 0.54 47 4.6 4.0 1 23 445 467 445 468 0.95 6 19 0.0012 0.1 13.0 0.3 2 23 478 499 477 499 0.96 7 19 0.66 58 4.3 0.1 1 23 576 599 576 599 0.93 8 19 0.0082 0.72 10.3 3.0 2 21 609 628 608 629 0.93 9 19 0.038 3.3 8.2 3.9 1 23 638 660 638 661 0.95 10 19 0.0047 0.41 11.1 2.2 2 23 675 696 674 696 0.97 11 19 0.00016 0.014 15.7 7.1 1 23 704 726 704 726 0.97 12 19 0.0019 0.17 12.3 0.5 1 23 864 887 864 887 0.95 13 19 0.21 18 5.9 3.1 2 23 895 918 894 918 0.91 14 19 0.00081 0.07 13.5 1.1 1 23 924 947 924 947 0.97 15 19 3.7e-05 0.0032 17.7 1.9 2 23 966 987 965 987 0.97 16 19 0.00012 0.011 16.0 1.0 1 23 994 1016 994 1016 0.98 17 19 0.044 3.8 8.0 0.0 2 21 1043 1062 1042 1063 0.92 18 19 0.57 49 4.5 3.6 1 23 1113 1136 1113 1136 0.95 19 19 0.0043 0.37 11.2 0.7 1 23 1173 1196 1173 1196 0.95
Sequence Information
- Coding Sequence
- ATGCTTCCGTCGGATATTTGCCGCACCTGTGCGGCGCAGAACAACCAACTGCTGCCCCTGTCCACTTGCCTGGACAGAGACGCCTCCAAAAGCTACTATGCGGTGCTCCAGGAATTGACGCAAATTGATCTGGAGAGCTCCGATGACAACCTGCCGCAACATCTGTGCACCGAGTGCTGGACGCGAATGGAAGGTGCCTACGCCTTTGTGCAGCAGGCCAGAAAAGTCAATGGAGAGCTGCTGGCGCGGATAAGGGAATGTTTGGATGAAATGCCCATTGATATTCCCGCGGAGCAGAACATTAAAACGGAAGTGGACCTCGACGAAGGCGGCAACAAGTCCGGAGTGGAGGTGGACGCCACCGAAGCGGCTTTGGAACTGAAGTGGCAGCCGGAGAGTGACAGCGATCAGGAATTTTGTGCTGCGCCGGAAAGTGATGAAGATGAAGTGGAAAAGAAGTCCTATCATCTGCGTCGAAGCTCCCGAAAACTAAAGCAACCAGTGGAAAGCGAAAATGAGGAATGTAAGCCATCTGAAGAACCATCGCCTGTTAAGCGCCGTCGAGGTCGTCCACCTGGTCCAGCGAAAAGCCAGGCAATGACCACTGATGGCCGCCACGCATGTGAGGTGTGCGGAAAGACATTCTCTTGGTACCGCGACATGCAGCGCCACGCCAGGATCCACTTCGAGAACGCTTCCTACGTGTGCGATTCCTGTGGCAAGGGATTTCTGCGCAAGGACAAGTACATATTCCATCTAAGATGCCACAAGAAGCGGGAGGCGAAATGGAAGGCTCTCCAGCTCGGAAAAGAGTGGCGTTTTGCTGAGCGTCTCTACAGCTCAGGGAGGTTGAAAAGAGTCGAGTGTAAGCTATGCGGGTCGATTTGCCAACGAATGGAGGAGCTTAGAACTCACCTAAGGAGTCATGCAGATGTGGAGACCTTAGCCAAGTTGAGAAGGGATAGTGACGTGGTAAGGGAGCATTTTCCTGGCTTGCCTTGTGACTTGGACCATATTAGGCAACAGATCTGCGGTGACATAGCAGAAGGCCATTTAGAGAAGTATGCATGTGTTGTGAATTTCCACGGATACGAGCTGGGACTCAGTGATTCCGATGAGGAGTGTGACAGCAAAGAGTCTAAATACCACTGCTTGGTGTGCAATATGTCTTTCAACCGCAAACATCGTCTGATGAGACACACCCTGGAGGACCACTCCCAATCTGCTACAACGCTGCCTTGGCAGCGCTGCAGTTCCTGTAAAGTTGGTTTCCTATGCCTAACGATCTACAACAAACATTTGAACACGCATTGCCACAGCAAAATACGTAGATATCGCTGCCGTAAATGTTCCGGGAGGTTTATGTGGCCGGAAAACCTCCAAAGACACGCGTGCTCGCACCACGAGGAGAAACCGATTGCCAGCCAAATAATGTGCTCCTTGTGCGAAACCTCGCTAACTAGCTTATCGCAACTTCGTCTTCACCTAATCACACACCAACATGATTTGAATGGCATTAATCCGGAGTACAATTCCATGTTCTTTCGGTCGTTTTATCCTGACGGATTGAAGTGCAGTATCTCGGATCTTGCTGTGCGTATAGCTGAGGATTTCGAGGTTCAGGACTTTGATCGCTATTATAATGCTAGCACCGAAAGTGGACAGGAGCTCGATCTTTTTGAATCCGAATCAGAGTTGAGCGACGAGGAAACATCAAAACCATCGCACATCTGTCTTTTATGTGGAGAAGTTTCGAGTTCACTGACGATCCTAATGCAGCACCAAATAAGCGCACATTCCGATGGGGTGACTGAGCTTCCTTGTCACTGCGAGTACTGTGGATCTGGCTTCGTAAGCAAAGCCCTTCTGCAACAACACCGTAGACACCGCTGCGAAAAGAAGCACTCCCGATTTCACTGCCGAGTATGCAATATCCGGTTTATATGGGAGTCGAACTATGAGAAACACCAACTGACTCACCATAACAAAACAAAAGATGGAGAAGAAGAACCCACAAAGTTGAAGTGCGACCAGTGCGAAAAGGTATTCATCTGGCACAAAGATCTCAATCGTCACAAACGACTGCATCAACCTCAGTCGGCTGCCCAGTTTGACTGTCCCCATTGCCATCGTAGGTTCCACCGCAAGGATGGCTTAAAGTCCCACTTAAAAGTGCACGCGGGAAATTCAGATTACGTAAATAATCAGCCTGTCGTACCTGACGTTAACCAGGAAATGACTCTGGCCCGGCTAAGTCGTCCTCATGGTTGCAAGCTGATTCAGTGCATGATCTGCCTCTCGCGTCACTCAAAGATCAGTGATCTCAGGGGTCACATAAGTTCCCATCAATACGAACTGAGTTTTACCGAAGACAGAGATATTCCAAGTGCCTCGAGAGCCTTTTACCCGGATCTGGAAAATACCTTAGAAAAAGATGAACTGGCCGAAAGGATTATGGCTGATGTGCAAAAGCAATTTGACTTAGACCGCTTTAGTTCCATCACAAACGAGGCCGGCCTGGAGCTGAATCTTGATAGCAGCGAAACTGATACTGAGGCCGAGCAGGAGGAGGATCAGTCATCTCCAAACTATCCTTGCAACCTCTGTACGGCGGTTGTAAAGAGGAAGCATCAGCTGTATGCCCACCAACTGGAGGAGCACAAGTGGGAGGAGGCGCTCCTCGTATGTTCCAACTGCCAGGCTAGATTTGTCAATGAATCTTTGTTCGATCACCACTCCAGAACCCTTTGCCACAATTCGCAAAAGCTCTTCCAGTGCCGCAAATGTCCGCTTCGTTTCCGCTGGCGGGACAATCTGAAGCTCCACATGGAAGTATTCCATCAGCTAGATGAGCTTGCAATCCAGGATGATTCGCCCAAAGCAGATGGCGATCTGCAGTGCGGAAAGTGTCAGCGCAGTTTTAGGATGCAAAAAGATCTCACGCGCCATACTTTAATGCACGGTCAGGAATCAAACATCTTCCGATGCCGTTGGTGTGCACGTCGCTTTTATCGCAAAGCCAATCTTTTACAGCATATCGCGCGTCATGGGATAAGTGTTAACCAGTTGCCTTATGCTGAAGCTATACTAGACTCATATGTGAATCCTGGAGGAAGGAAAAAGGTGGAGTGCCGAGTGTGCAACGTGAGCTTTCCCACCATCGCGGCTTTGCGACTGCATCTGGAAACCATGCCCGCCGGTAGTCACCATGACTACTCCTCGCTTCAAAACTACTCGATTACCAACCAAATGGGTTTCGAGATGGATTTGGATGATTCCGAGACTGATGATGATGAGGCTAGGACGCACACAAAACCACCAGGAGCCCCTGCCTCCTATACTTGCAATATGTGCCAACTAAGGTGTTTGCGGAAATTCGAGTTGTATCAACACCAGCAGGCTATGCACCGGATGGAGAAGATCTCCGACGGCTGTGATAGTTGCTTATTCAAGAGCGTCTGTCCGGAAATTATTTCCCACCACAAAAGAACTCAGTGCGAAAACCGGGAAAAGCAGTTCACATGCACACGCTGCGGCTACAAGTTCATGTGGGAGTCAAACCTATTGCAGCACATGGAGTTGCAGCATGAAAAGCCCGGGGAGCAGGAGCTGGATGAATCGAAGGAAGCGTCTGGTGACGAGCCCAAAGCCGAGGGCCAGGAGGGTCAGGAATCAGGACAGGAGCCCGCTAGGCGCACGGTTCTAGAGCAGTTTACTCTATGA
- Protein Sequence
- MLPSDICRTCAAQNNQLLPLSTCLDRDASKSYYAVLQELTQIDLESSDDNLPQHLCTECWTRMEGAYAFVQQARKVNGELLARIRECLDEMPIDIPAEQNIKTEVDLDEGGNKSGVEVDATEAALELKWQPESDSDQEFCAAPESDEDEVEKKSYHLRRSSRKLKQPVESENEECKPSEEPSPVKRRRGRPPGPAKSQAMTTDGRHACEVCGKTFSWYRDMQRHARIHFENASYVCDSCGKGFLRKDKYIFHLRCHKKREAKWKALQLGKEWRFAERLYSSGRLKRVECKLCGSICQRMEELRTHLRSHADVETLAKLRRDSDVVREHFPGLPCDLDHIRQQICGDIAEGHLEKYACVVNFHGYELGLSDSDEECDSKESKYHCLVCNMSFNRKHRLMRHTLEDHSQSATTLPWQRCSSCKVGFLCLTIYNKHLNTHCHSKIRRYRCRKCSGRFMWPENLQRHACSHHEEKPIASQIMCSLCETSLTSLSQLRLHLITHQHDLNGINPEYNSMFFRSFYPDGLKCSISDLAVRIAEDFEVQDFDRYYNASTESGQELDLFESESELSDEETSKPSHICLLCGEVSSSLTILMQHQISAHSDGVTELPCHCEYCGSGFVSKALLQQHRRHRCEKKHSRFHCRVCNIRFIWESNYEKHQLTHHNKTKDGEEEPTKLKCDQCEKVFIWHKDLNRHKRLHQPQSAAQFDCPHCHRRFHRKDGLKSHLKVHAGNSDYVNNQPVVPDVNQEMTLARLSRPHGCKLIQCMICLSRHSKISDLRGHISSHQYELSFTEDRDIPSASRAFYPDLENTLEKDELAERIMADVQKQFDLDRFSSITNEAGLELNLDSSETDTEAEQEEDQSSPNYPCNLCTAVVKRKHQLYAHQLEEHKWEEALLVCSNCQARFVNESLFDHHSRTLCHNSQKLFQCRKCPLRFRWRDNLKLHMEVFHQLDELAIQDDSPKADGDLQCGKCQRSFRMQKDLTRHTLMHGQESNIFRCRWCARRFYRKANLLQHIARHGISVNQLPYAEAILDSYVNPGGRKKVECRVCNVSFPTIAALRLHLETMPAGSHHDYSSLQNYSITNQMGFEMDLDDSETDDDEARTHTKPPGAPASYTCNMCQLRCLRKFELYQHQQAMHRMEKISDGCDSCLFKSVCPEIISHHKRTQCENREKQFTCTRCGYKFMWESNLLQHMELQHEKPGEQELDESKEASGDEPKAEGQEGQESGQEPARRTVLEQFTL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00548203;
- 90% Identity
- iTF_00591827;
- 80% Identity
- -